Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:26 (2894837): wrapper (7.7.26015): starting
20:06:26 (2894837): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 20:06:26] Arguments: --nthreads 4
[2024-06-23 20:06:26] Threads: 4
[2024-06-23 20:06:26] Checking for CVMFS
[2024-06-23 20:06:26] No cvmfs_config command found, will try listing directly
[2024-06-23 20:06:26] CVMFS is ok
[2024-06-23 20:06:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 20:06:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 20:06:26] Further information can be found at the LHC@home message board.
[2024-06-23 20:06:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 20:06:26] Checking for apptainer binary...
[2024-06-23 20:06:26] which: no apptainer in ((null))
[2024-06-23 20:06:26] apptainer is not installed, using version from CVMFS
[2024-06-23 20:06:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 20:06:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-23 20:06:26] apptainer works
[2024-06-23 20:06:26] Set ATHENA_PROC_NUMBER=4
[2024-06-23 20:06:26] Set ATHENA_CORE_NUMBER=4
[2024-06-23 20:06:26] Starting ATLAS job with PandaID=6240240501
[2024-06-23 20:06:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 07:24:03]  *** The last 200 lines of the pilot log: ***
[2024-06-24 07:24:03] 2024-06-24 05:23:47,860 | INFO     | fitting pss+swap vs Time
[2024-06-24 07:24:03] 2024-06-24 05:23:47,861 | INFO     | model: linear, x: [1719166017.0, 1719166078.0, 1719166139.0, 1719166200.0, 1719166261.0, 1719166322.0, 1719166383.0, 1719166444.0, 1719166505.0, 1719166566.0, 1719
[2024-06-24 07:24:03] 2024-06-24 05:23:47,861 | INFO     | sum of square deviations: 91600982602.5
[2024-06-24 07:24:03] 2024-06-24 05:23:47,878 | INFO     | sum of deviations: 322191620453.5001
[2024-06-24 07:24:03] 2024-06-24 05:23:47,879 | INFO     | mean x: 1719186299.5
[2024-06-24 07:24:03] 2024-06-24 05:23:47,879 | INFO     | mean y: 2358376.490990991
[2024-06-24 07:24:03] 2024-06-24 05:23:47,879 | INFO     | -- intersect: -6044600989.665895
[2024-06-24 07:24:03] 2024-06-24 05:23:47,879 | INFO     | intersect: -6044600989.665895
[2024-06-24 07:24:03] 2024-06-24 05:23:47,880 | INFO     | chi2: 4.6327335106469825
[2024-06-24 07:24:03] 2024-06-24 05:23:47,881 | INFO     | model: linear, x: [1719166017.0, 1719166078.0, 1719166139.0, 1719166200.0, 1719166261.0, 1719166322.0, 1719166383.0, 1719166444.0, 1719166505.0, 1719166566.0, 1719
[2024-06-24 07:24:03] 2024-06-24 05:23:47,881 | INFO     | sum of square deviations: 89553344210.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,896 | INFO     | sum of deviations: 360857074872.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,896 | INFO     | mean x: 1719186147.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,896 | INFO     | mean y: 2361237.2632375187
[2024-06-24 07:24:03] 2024-06-24 05:23:47,896 | INFO     | -- intersect: -6925135325.144414
[2024-06-24 07:24:03] 2024-06-24 05:23:47,897 | INFO     | intersect: -6925135325.144414
[2024-06-24 07:24:03] 2024-06-24 05:23:47,898 | INFO     | chi2: 3.8802256625955858
[2024-06-24 07:24:03] 2024-06-24 05:23:47,901 | INFO     | current chi2=3.8802256625955858 (change=16.243279401286035 %)
[2024-06-24 07:24:03] 2024-06-24 05:23:47,901 | INFO     | right removable region: 660
[2024-06-24 07:24:03] 2024-06-24 05:23:47,902 | INFO     | model: linear, x: [1719166322.0, 1719166383.0, 1719166444.0, 1719166505.0, 1719166566.0, 1719166627.0, 1719166688.0, 1719166749.0, 1719166810.0, 1719166871.0, 1719
[2024-06-24 07:24:03] 2024-06-24 05:23:47,902 | INFO     | sum of square deviations: 89553344210.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,914 | INFO     | sum of deviations: 165457262723.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,914 | INFO     | mean x: 1719186452.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,914 | INFO     | mean y: 2370038.511346445
[2024-06-24 07:24:03] 2024-06-24 05:23:47,915 | INFO     | -- intersect: -3173970130.219313
[2024-06-24 07:24:03] 2024-06-24 05:23:47,915 | INFO     | intersect: -3173970130.219313
[2024-06-24 07:24:03] 2024-06-24 05:23:47,916 | INFO     | chi2: 2.2975345561314278
[2024-06-24 07:24:03] 2024-06-24 05:23:47,916 | INFO     | current chi2=2.2975345561314278 (change=50.406502967390274 %)
[2024-06-24 07:24:03] 2024-06-24 05:23:47,917 | INFO     | model: linear, x: [1719166627.0, 1719166688.0, 1719166749.0, 1719166810.0, 1719166871.0, 1719166932.0, 1719166993.0, 1719167054.0, 1719167115.0, 1719167176.0, 1719
[2024-06-24 07:24:03] 2024-06-24 05:23:47,917 | INFO     | sum of square deviations: 87536450580.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,930 | INFO     | sum of deviations: 38728520610.49998
[2024-06-24 07:24:03] 2024-06-24 05:23:47,930 | INFO     | mean x: 1719186604.5
[2024-06-24 07:24:03] 2024-06-24 05:23:47,930 | INFO     | mean y: 2379621.8704268294
[2024-06-24 07:24:03] 2024-06-24 05:23:47,930 | INFO     | -- intersect: -758235566.4827325
[2024-06-24 07:24:03] 2024-06-24 05:23:47,930 | INFO     | intersect: -758235566.4827325
[2024-06-24 07:24:03] 2024-06-24 05:23:47,931 | INFO     | chi2: 0.8944050846081198
[2024-06-24 07:24:03] 2024-06-24 05:23:47,931 | INFO     | current chi2=0.8944050846081198 (change=61.07109326294039 %)
[2024-06-24 07:24:03] 2024-06-24 05:23:47,932 | INFO     | model: linear, x: [1719166932.0, 1719166993.0, 1719167054.0, 1719167115.0, 1719167176.0, 1719167237.0, 1719167298.0, 1719167359.0, 1719167420.0, 1719167481.0, 1719
[2024-06-24 07:24:03] 2024-06-24 05:23:47,932 | INFO     | sum of square deviations: 85550069150.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,944 | INFO     | sum of deviations: 6642470742.999985
[2024-06-24 07:24:03] 2024-06-24 05:23:47,944 | INFO     | mean x: 1719186757.0
[2024-06-24 07:24:03] 2024-06-24 05:23:47,944 | INFO     | mean y: 2382080.4316436253
[2024-06-24 07:24:03] 2024-06-24 05:23:47,944 | INFO     | -- intersect: -131102881.63311848
[2024-06-24 07:24:03] 2024-06-24 05:23:47,945 | INFO     | intersect: -131102881.63311848
[2024-06-24 07:24:03] 2024-06-24 05:23:47,945 | INFO     | chi2: 0.7819382965726813
[2024-06-24 07:24:03] 2024-06-24 05:23:47,946 | INFO     | current chi2=0.7819382965726813 (change=12.574479949956391 %)
[2024-06-24 07:24:03] 2024-06-24 05:23:47,946 | INFO     | left removable region: 30
[2024-06-24 07:24:03] 2024-06-24 05:23:47,947 | INFO     | model: linear, x: [1719167847.0, 1719167908.0, 1719167969.0, 1719168030.0, 1719168091.0, 1719168152.0, 1719168213.0, 1719168274.0, 1719168335.0, 1719168396.0, 1719
[2024-06-24 07:24:03] 2024-06-24 05:23:47,947 | INFO     | sum of square deviations: 77535211897.5
[2024-06-24 07:24:03] 2024-06-24 05:23:47,959 | INFO     | sum of deviations: 30679365803.000004
[2024-06-24 07:24:03] 2024-06-24 05:23:47,959 | INFO     | mean x: 1719187031.5
[2024-06-24 07:24:03] 2024-06-24 05:23:47,959 | INFO     | mean y: 2386459.412698413
[2024-06-24 07:24:03] 2024-06-24 05:23:47,959 | INFO     | -- intersect: -677866635.0508614
[2024-06-24 07:24:03] 2024-06-24 05:23:47,959 | INFO     | intersect: -677866635.0508614
[2024-06-24 07:24:03] 2024-06-24 05:23:47,960 | INFO     | chi2: 0.005466160032111026
[2024-06-24 07:24:03] 2024-06-24 05:23:47,960 | INFO     | -- intersect: -677866635.0508614
[2024-06-24 07:24:03] 2024-06-24 05:23:47,961 | INFO     | current memory leak: 0.40 B/s (using 630 data points, chi2=0.01)
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | ..............................
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | . Timing measurements:
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | . get job = 0 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | . initial setup = 1 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | . payload setup = 4 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | . stage-in = 0 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,962 | INFO     | . payload execution = 40602 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,963 | INFO     | . stage-out = 1 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,963 | INFO     | . log creation = 0 s
[2024-06-24 07:24:03] 2024-06-24 05:23:47,963 | INFO     | ..............................
[2024-06-24 07:24:03] 2024-06-24 05:23:48,013 | WARNING  | process 2905880 is no longer using CPU - aborting
[2024-06-24 07:24:03] 2024-06-24 05:23:48,036 | INFO     | aborting job monitoring since job object (job id=6240240501) has expired
[2024-06-24 07:24:03] 2024-06-24 05:23:48,057 | INFO     | 
[2024-06-24 07:24:03] 2024-06-24 05:23:48,057 | INFO     | job summary report
[2024-06-24 07:24:03] 2024-06-24 05:23:48,057 | INFO     | --------------------------------------------------
[2024-06-24 07:24:03] 2024-06-24 05:23:48,057 | INFO     | PanDA job id: 6240240501
[2024-06-24 07:24:03] 2024-06-24 05:23:48,057 | INFO     | task id: 38921007
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | errors: (none)
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | pilot state: finished 
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | transexitcode: 0
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | exeerrorcode: 0
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | exeerrordiag: 
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | exitcode: 0
[2024-06-24 07:24:03] 2024-06-24 05:23:48,058 | INFO     | exitmsg: OK
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | cpuconsumptiontime: 158964 s
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | nevents: 400
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | neventsw: 0
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | pid: 2905880
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | pgrp: 2905880
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | corecount: 4
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | event service: False
[2024-06-24 07:24:03] 2024-06-24 05:23:48,059 | INFO     | sizes: {0: 2387118, 4: 2387324, 11: 2387352, 40610: 2430666, 40612: 2439648, 40613: 2439704, 40619: 2440002}
[2024-06-24 07:24:03] 2024-06-24 05:23:48,060 | INFO     | --------------------------------------------------
[2024-06-24 07:24:03] 2024-06-24 05:23:48,060 | INFO     | 
[2024-06-24 07:24:03] 2024-06-24 05:23:48,060 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-24 07:24:03] 2024-06-24 05:23:48,076 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 07:24:03] 2024-06-24 05:23:48,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,079 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 07:24:03] 2024-06-24 05:23:48,079 | INFO     | job 6240240501 has completed (purged errors)
[2024-06-24 07:24:03] 2024-06-24 05:23:48,079 | INFO     | overall cleanup function is called
[2024-06-24 07:24:03] 2024-06-24 05:23:49,085 | INFO     | --- collectZombieJob: --- 10, [2905880]
[2024-06-24 07:24:03] 2024-06-24 05:23:49,085 | INFO     | zombie collector waiting for pid 2905880
[2024-06-24 07:24:03] 2024-06-24 05:23:49,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 07:24:03] 2024-06-24 05:23:50,090 | INFO     | collected zombie processes
[2024-06-24 07:24:03] 2024-06-24 05:23:50,091 | INFO     | will now attempt to kill all subprocesses of pid=2905880
[2024-06-24 07:24:03] 2024-06-24 05:23:50,231 | INFO     | process IDs to be killed: [2905880] (in reverse order)
[2024-06-24 07:24:03] 2024-06-24 05:23:50,328 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 07:24:03] 2024-06-24 05:23:50,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 07:24:03] 2024-06-24 05:23:50,334 | INFO     | did not find any defunct processes belonging to 2905880
[2024-06-24 07:24:03] 2024-06-24 05:23:50,339 | INFO     | did not find any defunct processes belonging to 2905880
[2024-06-24 07:24:03] 2024-06-24 05:23:50,340 | INFO     | ready for new job
[2024-06-24 07:24:03] 2024-06-24 05:23:50,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 07:24:03] 2024-06-24 05:23:50,343 | INFO     | *************************************
[2024-06-24 07:24:03] 2024-06-24 05:23:50,343 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 07:24:03] 2024-06-24 05:23:50,343 | INFO     | *************************************
[2024-06-24 07:24:03] 2024-06-24 05:23:50,344 | INFO     | 
[2024-06-24 07:24:03] 2024-06-24 05:23:50,346 | INFO     | architecture information:
[2024-06-24 07:24:03] 2024-06-24 05:23:50,346 | INFO     | executing command: cat /etc/os-release
[2024-06-24 07:24:03] 2024-06-24 05:23:50,359 | INFO     | cat /etc/os-release:
[2024-06-24 07:24:03] NAME="CentOS Linux"
[2024-06-24 07:24:03] VERSION="7 (Core)"
[2024-06-24 07:24:03] ID="centos"
[2024-06-24 07:24:03] ID_LIKE="rhel fedora"
[2024-06-24 07:24:03] VERSION_ID="7"
[2024-06-24 07:24:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 07:24:03] ANSI_COLOR="0;31"
[2024-06-24 07:24:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 07:24:03] HOME_URL="https://www.centos.org/"
[2024-06-24 07:24:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 07:24:03] 
[2024-06-24 07:24:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 07:24:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 07:24:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 07:24:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 07:24:03] 
[2024-06-24 07:24:03] 2024-06-24 05:23:50,360 | INFO     | *************************************
[2024-06-24 07:24:03] 2024-06-24 05:23:50,862 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-24 07:24:03] 2024-06-24 05:23:50,882 | INFO     | sufficient remaining disk space (1678194507776 B)
[2024-06-24 07:24:03] 2024-06-24 05:23:50,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 07:24:03] 2024-06-24 05:23:50,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 07:24:03] 2024-06-24 05:23:50,883 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 07:24:03] 2024-06-24 05:23:50,883 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 07:24:03] 2024-06-24 05:23:50,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 07:24:03] 2024-06-24 05:23:50,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 07:24:03] 2024-06-24 05:23:51,114 | INFO     | all data control threads have been joined
[2024-06-24 07:24:03] 2024-06-24 05:23:51,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 07:24:03] 2024-06-24 05:23:51,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 07:24:03] 2024-06-24 05:23:51,554 | INFO     | aborting loop
[2024-06-24 07:24:03] 2024-06-24 05:23:51,594 | INFO     | all job control threads have been joined
[2024-06-24 07:24:03] 2024-06-24 05:23:51,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 07:24:03] 2024-06-24 05:23:51,888 | INFO     | [job] retrieve thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,022 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,119 | INFO     | [data] control thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,132 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,347 | INFO     | all payload control threads have been joined
[2024-06-24 07:24:03] 2024-06-24 05:23:52,559 | INFO     | [job] job monitor thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,595 | INFO     | [job] control thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,609 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,693 | INFO     | [data] copytool_in thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:52,806 | INFO     | [payload] failed_post thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:53,031 | INFO     | [payload] validate_post thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:53,039 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:53,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 07:24:03] 2024-06-24 05:23:53,066 | INFO     | [job] validate thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:53,309 | INFO     | [data] copytool_out thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:53,352 | INFO     | [payload] control thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:54,071 | INFO     | [job] queue monitor thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:55,801 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 07:24:03] 2024-06-24 05:23:57,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47169349588032)>', '<ExcThread(monitor, started 47169540368128)>']
[2024-06-24 07:24:03] 2024-06-24 05:23:57,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 07:24:03] 2024-06-24 05:23:57,916 | INFO     | [monitor] control thread has ended
[2024-06-24 07:24:03] 2024-06-24 05:24:02,470 | INFO     | all workflow threads have been joined
[2024-06-24 07:24:03] 2024-06-24 05:24:02,470 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 07:24:03] 2024-06-24 05:24:02,471 | INFO     | traces error code: 0
[2024-06-24 07:24:03] 2024-06-24 05:24:02,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 07:24:03] 2024-06-24 05:24:02,583 [wrapper] ==== pilot stdout END ====
[2024-06-24 07:24:03] 2024-06-24 05:24:02,585 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 07:24:03] 2024-06-24 05:24:02,588 [wrapper] pilotpid: 2899076
[2024-06-24 07:24:03] 2024-06-24 05:24:02,590 [wrapper] Pilot exit status: 0
[2024-06-24 07:24:03] 2024-06-24 05:24:02,598 [wrapper] pandaids: 6240240501
[2024-06-24 07:24:03] 2024-06-24 05:24:02,639 [wrapper] cleanup supervisor_pilot 3807581 2899077
[2024-06-24 07:24:03] 2024-06-24 05:24:02,641 [wrapper] Test setup, not cleaning
[2024-06-24 07:24:03] 2024-06-24 05:24:02,643 [wrapper] ==== wrapper stdout END ====
[2024-06-24 07:24:03] 2024-06-24 05:24:02,644 [wrapper] ==== wrapper stderr END ====
[2024-06-24 07:24:03] 2024-06-24 05:24:02,648 [wrapper] apfmon messages muted
[2024-06-24 07:24:03]  *** Error codes and diagnostics ***
[2024-06-24 07:24:03]     "exeErrorCode": 0,
[2024-06-24 07:24:03]     "exeErrorDiag": "",
[2024-06-24 07:24:03]     "pilotErrorCode": 0,
[2024-06-24 07:24:03]     "pilotErrorDiag": "",
[2024-06-24 07:24:03]  *** Listing of results directory ***
[2024-06-24 07:24:03] total 934492
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc    469766 Jun 21 22:25 pilot3.tar.gz
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc      5654 Jun 21 22:26 queuedata.json
[2024-06-24 07:24:03] -rwx------ 1 boinc boinc     32308 Jun 21 22:29 runpilot2-wrapper.sh
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc       100 Jun 23 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 07:24:03] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 20:06 run_atlas
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc       105 Jun 23 20:06 job.xml
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc      6455 Jun 23 20:06 init_data.xml
[2024-06-24 07:24:03] -rw-r--r-- 2 boinc boinc 583534097 Jun 23 20:06 EVNT.38776201._000738.pool.root.1
[2024-06-24 07:24:03] -rw-r--r-- 2 boinc boinc     17537 Jun 23 20:06 start_atlas.sh
[2024-06-24 07:24:03] drwxrwx--x 2 boinc boinc      4096 Jun 23 20:06 shared
[2024-06-24 07:24:03] -rw-r--r-- 2 boinc boinc    482532 Jun 23 20:06 input.tar.gz
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc         0 Jun 23 20:06 boinc_lockfile
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc      2629 Jun 23 20:06 pandaJob.out
[2024-06-24 07:24:03] -rw------- 1 boinc boinc       424 Jun 23 20:06 setup.sh.local
[2024-06-24 07:24:03] -rw------- 1 boinc boinc   1025344 Jun 23 20:06 agis_schedconf.cvmfs.json
[2024-06-24 07:24:03] -rw------- 1 boinc boinc   1321363 Jun 23 20:06 cric_ddmendpoints.json
[2024-06-24 07:24:03] drwx------ 4 boinc boinc      4096 Jun 23 20:06 pilot3
[2024-06-24 07:24:03] -rw------- 1 boinc boinc 358251452 Jun 24 07:22 HITS.38921007._053269.pool.root.1
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc       533 Jun 24 07:23 boinc_task_state.xml
[2024-06-24 07:24:03] -rw------- 1 boinc boinc        95 Jun 24 07:23 pilot_heartbeat.json
[2024-06-24 07:24:03] -rw------- 1 boinc boinc      1042 Jun 24 07:23 memory_monitor_summary.json
[2024-06-24 07:24:03] -rw------- 1 boinc boinc         0 Jun 24 07:23 agis_ddmendpoints.agis.ALL.json
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc        29 Jun 24 07:23 wrapper_checkpoint.txt
[2024-06-24 07:24:03] -rw------- 1 boinc boinc    641477 Jun 24 07:23 log.38921007._053269.job.log.tgz.1
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc      8192 Jun 24 07:23 boinc_mmap_file
[2024-06-24 07:24:03] -rw------- 1 boinc boinc      7759 Jun 24 07:23 heartbeat.json
[2024-06-24 07:24:03] -rw------- 1 boinc boinc      4345 Jun 24 07:24 pilotlog.txt
[2024-06-24 07:24:03] -rw------- 1 boinc boinc   5157085 Jun 24 07:24 log.38921007._053269.job.log.1
[2024-06-24 07:24:03] -rw------- 1 boinc boinc       357 Jun 24 07:24 output.list
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc       620 Jun 24 07:24 runtime_log
[2024-06-24 07:24:03] -rw------- 1 boinc boinc   5816320 Jun 24 07:24 result.tar.gz
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc     11410 Jun 24 07:24 runtime_log.err
[2024-06-24 07:24:03] -rw------- 1 boinc boinc       660 Jun 24 07:24 Rr2KDmY4ze5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmfLYKDmyAnAGn.diag
[2024-06-24 07:24:03] -rw-r--r-- 1 boinc boinc     21374 Jun 24 07:24 stderr.txt
[2024-06-24 07:24:03] HITS file was successfully produced:
[2024-06-24 07:24:03] -rw------- 1 boinc boinc 358251452 Jun 24 07:22 shared/HITS.pool.root.1
[2024-06-24 07:24:03]  *** Contents of shared directory: ***
[2024-06-24 07:24:03] total 925896
[2024-06-24 07:24:03] -rw-r--r-- 2 boinc boinc 583534097 Jun 23 20:06 ATLAS.root_0
[2024-06-24 07:24:03] -rw-r--r-- 2 boinc boinc     17537 Jun 23 20:06 start_atlas.sh
[2024-06-24 07:24:03] -rw-r--r-- 2 boinc boinc    482532 Jun 23 20:06 input.tar.gz
[2024-06-24 07:24:03] -rw------- 1 boinc boinc 358251452 Jun 24 07:22 HITS.pool.root.1
[2024-06-24 07:24:03] -rw------- 1 boinc boinc   5816320 Jun 24 07:24 result.tar.gz
07:24:05 (2894837): run_atlas exited; CPU time 158623.328748
07:24:05 (2894837): called boinc_finish(0)

</stderr_txt>
]]>

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