Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:21:29 (51522): wrapper (7.7.26015): starting
22:21:29 (51522): wrapper: running run_atlas (--nthreads 8)
[2024-06-21 22:21:29] Arguments: --nthreads 8
[2024-06-21 22:21:29] Threads: 8
[2024-06-21 22:21:29] Checking for CVMFS
[2024-06-21 22:21:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 22:21:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 22:21:30] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 22:21:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 22:21:30] 2.11.2.0 2604 16105 107280 134150 2 207 9486473 18432001 18611 130560 0 11113512 99.046 19812504 56291 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-21 22:21:30] CVMFS is ok
[2024-06-21 22:21:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 22:21:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 22:21:30] Further information can be found at the LHC@home message board.
[2024-06-21 22:21:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 22:21:30] Checking for apptainer binary...
[2024-06-21 22:21:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 22:21:30] Running /usr/bin/apptainer --version
[2024-06-21 22:21:30] apptainer version 1.3.1-1.el7
[2024-06-21 22:21:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 22:21:31] c-212-5.aglt2.org
[2024-06-21 22:21:31] apptainer works
[2024-06-21 22:21:31] Set ATHENA_PROC_NUMBER=8
[2024-06-21 22:21:31] Set ATHENA_CORE_NUMBER=8
[2024-06-21 22:21:31] Starting ATLAS job with PandaID=6240218438
[2024-06-21 22:21:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 03:09:51]  *** The last 200 lines of the pilot log: ***
[2024-06-22 03:09:51] 2024-06-22 07:09:15,008 | INFO     | monitor loop #1244: job 0:6240218438 is in state 'finished'
[2024-06-22 03:09:51] 2024-06-22 07:09:15,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 03:09:51] 2024-06-22 07:09:17,513 | INFO     | monitor loop #1245: job 0:6240218438 is in state 'finished'
[2024-06-22 03:09:51] 2024-06-22 07:09:17,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 03:09:51] 2024-06-22 07:09:20,020 | INFO     | monitor loop #1246: job 0:6240218438 is in state 'finished'
[2024-06-22 03:09:51] 2024-06-22 07:09:20,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 03:09:51] 2024-06-22 07:09:22,524 | INFO     | monitor loop #1247: job 0:6240218438 is in state 'finished'
[2024-06-22 03:09:51] 2024-06-22 07:09:22,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 03:09:51] 2024-06-22 07:09:25,031 | INFO     | monitor loop #1248: job 0:6240218438 is in state 'finished'
[2024-06-22 03:09:51] 2024-06-22 07:09:25,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 03:09:51] 2024-06-22 07:09:27,535 | INFO     | monitor loop #1249: job 0:6240218438 is in state 'finished'
[2024-06-22 03:09:51] 2024-06-22 07:09:27,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-22 03:09:51] 2024-06-22 07:09:27,568 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 03:09:51] 2024-06-22 07:09:27,568 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6240218438/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 03:09:51] 2024-06-22 07:09:27,569 | INFO     | extracted standard info from prmon json
[2024-06-22 03:09:51] 2024-06-22 07:09:27,569 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 03:09:51] 2024-06-22 07:09:27,569 | WARNING  | GPU info not found in prmon json
[2024-06-22 03:09:51] 2024-06-22 07:09:27,569 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 03:09:51] 2024-06-22 07:09:27,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 03:09:51] 2024-06-22 07:09:27,575 | INFO     | fitting pss+swap vs Time
[2024-06-22 03:09:51] 2024-06-22 07:09:27,575 | INFO     | model: linear, x: [1719022959.0, 1719023020.0, 1719023081.0, 1719023142.0, 1719023203.0, 1719023264.0, 1719023325.0, 1719023386.0, 1719023447.0, 1719023508.0, 1719
[2024-06-22 03:09:51] 2024-06-22 07:09:27,575 | INFO     | sum of square deviations: 6953821798.145374
[2024-06-22 03:09:51] 2024-06-22 07:09:27,577 | INFO     | sum of deviations: 467295419056.9258
[2024-06-22 03:09:51] 2024-06-22 07:09:27,577 | INFO     | mean x: 1719031529.535461
[2024-06-22 03:09:51] 2024-06-22 07:09:27,577 | INFO     | mean y: 2313158.4574468085
[2024-06-22 03:09:51] 2024-06-22 07:09:27,577 | INFO     | -- intersect: -115516258108.4371
[2024-06-22 03:09:51] 2024-06-22 07:09:27,577 | INFO     | intersect: -115516258108.4371
[2024-06-22 03:09:51] 2024-06-22 07:09:27,577 | INFO     | chi2: 14.971497232356546
[2024-06-22 03:09:51] 2024-06-22 07:09:27,578 | INFO     | model: linear, x: [1719022959.0, 1719023020.0, 1719023081.0, 1719023142.0, 1719023203.0, 1719023264.0, 1719023325.0, 1719023386.0, 1719023447.0, 1719023508.0, 1719
[2024-06-22 03:09:51] 2024-06-22 07:09:27,578 | INFO     | sum of square deviations: 6590459895.638977
[2024-06-22 03:09:51] 2024-06-22 07:09:27,579 | INFO     | sum of deviations: 477033901057.31396
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | mean x: 1719031377.036101
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | mean y: 2317127.0685920576
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | -- intersect: -124425455261.02985
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | intersect: -124425455261.02985
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | chi2: 14.049206171786157
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | current chi2=14.049206171786157 (change=6.160312801428602 %)
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | right removable region: 276
[2024-06-22 03:09:51] 2024-06-22 07:09:27,580 | INFO     | model: linear, x: [1719023264.0, 1719023325.0, 1719023386.0, 1719023447.0, 1719023508.0, 1719023569.0, 1719023630.0, 1719023691.0, 1719023752.0, 1719023813.0, 1719
[2024-06-22 03:09:51] 2024-06-22 07:09:27,581 | INFO     | sum of square deviations: 6590453795.638975
[2024-06-22 03:09:51] 2024-06-22 07:09:27,582 | INFO     | sum of deviations: 387863898130.10474
[2024-06-22 03:09:51] 2024-06-22 07:09:27,582 | INFO     | mean x: 1719031682.036101
[2024-06-22 03:09:51] 2024-06-22 07:09:27,582 | INFO     | mean y: 2346441.689530686
[2024-06-22 03:09:51] 2024-06-22 07:09:27,582 | INFO     | -- intersect: -101166761161.32166
[2024-06-22 03:09:51] 2024-06-22 07:09:27,583 | INFO     | intersect: -101166761161.32166
[2024-06-22 03:09:51] 2024-06-22 07:09:27,583 | INFO     | chi2: 11.580469919524417
[2024-06-22 03:09:51] 2024-06-22 07:09:27,583 | INFO     | current chi2=11.580469919524417 (change=22.64988771799929 %)
[2024-06-22 03:09:51] 2024-06-22 07:09:27,583 | INFO     | left removable region: 10
[2024-06-22 03:09:51] 2024-06-22 07:09:27,583 | INFO     | model: linear, x: [1719023569.0, 1719023630.0, 1719023691.0, 1719023752.0, 1719023813.0, 1719023874.0, 1719023935.0, 1719023996.0, 1719024057.0, 1719024118.0, 1719
[2024-06-22 03:09:51] 2024-06-22 07:09:27,583 | INFO     | sum of square deviations: 5836075610.1240225
[2024-06-22 03:09:51] 2024-06-22 07:09:27,585 | INFO     | sum of deviations: 337659697143.684
[2024-06-22 03:09:51] 2024-06-22 07:09:27,585 | INFO     | mean x: 1719031651.537594
[2024-06-22 03:09:51] 2024-06-22 07:09:27,585 | INFO     | mean y: 2377376.6315789474
[2024-06-22 03:09:51] 2024-06-22 07:09:27,585 | INFO     | -- intersect: -99456187867.39478
[2024-06-22 03:09:51] 2024-06-22 07:09:27,585 | INFO     | intersect: -99456187867.39478
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | chi2: 9.047906363073405
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | -- intersect: -99456187867.39478
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | current memory leak: 57.86 B/s (using 266 data points, chi2=9.05)
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | ..............................
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | . Timing measurements:
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | . get job = 0 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,586 | INFO     | . initial setup = 2 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,587 | INFO     | . payload setup = 14 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,587 | INFO     | . stage-in = 0 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,587 | INFO     | . payload execution = 17177 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,587 | INFO     | . stage-out = 2 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,587 | INFO     | . log creation = 0 s
[2024-06-22 03:09:51] 2024-06-22 07:09:27,587 | INFO     | ..............................
[2024-06-22 03:09:51] 2024-06-22 07:09:28,166 | INFO     | 
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | job summary report
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | --------------------------------------------------
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | PanDA job id: 6240218438
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | task id: 40024031
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | errors: (none)
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | pilot state: finished 
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | transexitcode: 0
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | exeerrorcode: 0
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | exeerrordiag: 
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | exitcode: 0
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | exitmsg: OK
[2024-06-22 03:09:51] 2024-06-22 07:09:28,167 | INFO     | cpuconsumptiontime: 54082 s
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | nevents: 400
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | neventsw: 0
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | pid: 68730
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | pgrp: 68730
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | corecount: 8
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | event service: False
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | sizes: {0: 2386917, 7: 2387123, 11: 2387151, 17196: 2418766, 17199: 2427726, 17200: 2427782, 17235: 2428080}
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | --------------------------------------------------
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | 
[2024-06-22 03:09:51] 2024-06-22 07:09:28,168 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,231 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | job 6240218438 has completed (purged errors)
[2024-06-22 03:09:51] 2024-06-22 07:09:28,232 | INFO     | overall cleanup function is called
[2024-06-22 03:09:51] 2024-06-22 07:09:29,239 | INFO     | --- collectZombieJob: --- 10, [68730]
[2024-06-22 03:09:51] 2024-06-22 07:09:29,239 | INFO     | zombie collector waiting for pid 68730
[2024-06-22 03:09:51] 2024-06-22 07:09:29,239 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 03:09:51] 2024-06-22 07:09:30,245 | INFO     | collected zombie processes
[2024-06-22 03:09:51] 2024-06-22 07:09:30,245 | INFO     | will now attempt to kill all subprocesses of pid=68730
[2024-06-22 03:09:51] 2024-06-22 07:09:30,754 | INFO     | process IDs to be killed: [68730] (in reverse order)
[2024-06-22 03:09:51] 2024-06-22 07:09:31,152 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 03:09:51] 2024-06-22 07:09:31,153 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 03:09:51] 2024-06-22 07:09:31,167 | INFO     | did not find any defunct processes belonging to 68730
[2024-06-22 03:09:51] 2024-06-22 07:09:31,178 | INFO     | did not find any defunct processes belonging to 68730
[2024-06-22 03:09:51] 2024-06-22 07:09:31,179 | INFO     | ready for new job
[2024-06-22 03:09:51] 2024-06-22 07:09:31,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 03:09:51] 2024-06-22 07:09:31,180 | INFO     | *************************************
[2024-06-22 03:09:51] 2024-06-22 07:09:31,181 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 03:09:51] 2024-06-22 07:09:31,181 | INFO     | *************************************
[2024-06-22 03:09:51] 2024-06-22 07:09:31,181 | INFO     | 
[2024-06-22 03:09:51] 2024-06-22 07:09:31,185 | INFO     | architecture information:
[2024-06-22 03:09:51] 2024-06-22 07:09:31,187 | INFO     | executing command: cat /etc/os-release
[2024-06-22 03:09:51] 2024-06-22 07:09:31,210 | INFO     | cat /etc/os-release:
[2024-06-22 03:09:51] NAME="CentOS Linux"
[2024-06-22 03:09:51] VERSION="7 (Core)"
[2024-06-22 03:09:51] ID="centos"
[2024-06-22 03:09:51] ID_LIKE="rhel fedora"
[2024-06-22 03:09:51] VERSION_ID="7"
[2024-06-22 03:09:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 03:09:51] ANSI_COLOR="0;31"
[2024-06-22 03:09:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 03:09:51] HOME_URL="https://www.centos.org/"
[2024-06-22 03:09:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 03:09:51] 
[2024-06-22 03:09:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 03:09:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 03:09:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 03:09:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 03:09:51] 
[2024-06-22 03:09:51] 2024-06-22 07:09:31,210 | INFO     | *************************************
[2024-06-22 03:09:51] 2024-06-22 07:09:31,713 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-22 03:09:51] 2024-06-22 07:09:31,829 | INFO     | sufficient remaining disk space (99440656384 B)
[2024-06-22 03:09:51] 2024-06-22 07:09:31,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 03:09:51] 2024-06-22 07:09:31,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 03:09:51] 2024-06-22 07:09:31,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 03:09:51] 2024-06-22 07:09:31,830 | INFO     | aborting loop
[2024-06-22 03:09:51] 2024-06-22 07:09:31,830 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 03:09:51] 2024-06-22 07:09:31,830 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 03:09:51] 2024-06-22 07:09:31,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 03:09:51] 2024-06-22 07:09:31,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 03:09:51] 2024-06-22 07:09:32,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 03:09:51] 2024-06-22 07:09:32,374 | INFO     | all job control threads have been joined
[2024-06-22 03:09:51] 2024-06-22 07:09:32,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 03:09:51] 2024-06-22 07:09:32,835 | INFO     | [job] retrieve thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:32,836 | INFO     | [job] job monitor thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:32,862 | INFO     | all payload control threads have been joined
[2024-06-22 03:09:51] 2024-06-22 07:09:32,878 | INFO     | all data control threads have been joined
[2024-06-22 03:09:51] 2024-06-22 07:09:32,920 | INFO     | [job] validate thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:32,939 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,189 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,380 | INFO     | [job] control thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,460 | INFO     | [payload] validate_post thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,562 | INFO     | [payload] failed_post thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,762 | INFO     | [data] copytool_in thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,769 | INFO     | [job] queue monitor thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,868 | INFO     | [payload] control thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:33,884 | INFO     | [data] control thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:34,108 | INFO     | [data] copytool_out thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:34,183 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:35,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 03:09:51] 2024-06-22 07:09:39,187 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:42,185 | INFO     | job.realtimelogging is not enabled
[2024-06-22 03:09:51] 2024-06-22 07:09:43,191 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 03:09:51] 2024-06-22 07:09:44,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087450560320)>', '<ExcThread(monitor, started 140086800807680)>']
[2024-06-22 03:09:51] 2024-06-22 07:09:44,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 03:09:51] 2024-06-22 07:09:44,894 | INFO     | [monitor] control thread has ended
[2024-06-22 03:09:51] 2024-06-22 07:09:49,700 | INFO     | all workflow threads have been joined
[2024-06-22 03:09:51] 2024-06-22 07:09:49,700 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 03:09:51] 2024-06-22 07:09:49,704 | INFO     | traces error code: 0
[2024-06-22 03:09:51] 2024-06-22 07:09:49,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 03:09:51] 2024-06-22 07:09:49,974 [wrapper] ==== pilot stdout END ====
[2024-06-22 03:09:51] 2024-06-22 07:09:49,994 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 03:09:51] 2024-06-22 07:09:50,040 [wrapper] pilotpid: 57445
[2024-06-22 03:09:51] 2024-06-22 07:09:50,082 [wrapper] Pilot exit status: 0
[2024-06-22 03:09:51] 2024-06-22 07:09:50,242 [wrapper] pandaids: 6240218438
[2024-06-22 03:09:51] 2024-06-22 07:09:50,575 [wrapper] cleanup supervisor_pilot 30363 57446
[2024-06-22 03:09:51] 2024-06-22 07:09:50,614 [wrapper] Test setup, not cleaning
[2024-06-22 03:09:51] 2024-06-22 07:09:50,651 [wrapper] ==== wrapper stdout END ====
[2024-06-22 03:09:51] 2024-06-22 07:09:50,672 [wrapper] ==== wrapper stderr END ====
[2024-06-22 03:09:51] 2024-06-22 07:09:50,680 [wrapper] apfmon messages muted
[2024-06-22 03:09:51]  *** Error codes and diagnostics ***
[2024-06-22 03:09:51]     "exeErrorCode": 0,
[2024-06-22 03:09:51]     "exeErrorDiag": "",
[2024-06-22 03:09:51]     "pilotErrorCode": 0,
[2024-06-22 03:09:51]     "pilotErrorDiag": "",
[2024-06-22 03:09:51]  *** Listing of results directory ***
[2024-06-22 03:09:51] total 842152
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas    469766 Jun 21 16:10 pilot3.tar.gz
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas      5654 Jun 21 16:19 queuedata.json
[2024-06-22 03:09:51] -rwx------ 1 boincer umatlas     32308 Jun 21 16:20 runpilot2-wrapper.sh
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas       100 Jun 21 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 03:09:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun 21 22:21 run_atlas
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas       105 Jun 21 22:21 job.xml
[2024-06-22 03:09:51] -rw-r--r-- 2 boincer umatlas 595449486 Jun 21 22:21 EVNT.40024029._000045.pool.root.1
[2024-06-22 03:09:51] -rw-r--r-- 2 boincer umatlas     17537 Jun 21 22:21 start_atlas.sh
[2024-06-22 03:09:51] drwxrwx--x 2 boincer umatlas      4096 Jun 21 22:21 shared
[2024-06-22 03:09:51] -rw-r--r-- 2 boincer umatlas    482527 Jun 21 22:21 input.tar.gz
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas         0 Jun 21 22:21 boinc_lockfile
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas      2570 Jun 21 22:21 pandaJob.out
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas       467 Jun 21 22:21 setup.sh.local
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas   1025953 Jun 21 22:21 agis_schedconf.cvmfs.json
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas   1321363 Jun 21 22:21 cric_ddmendpoints.json
[2024-06-22 03:09:51] drwx------ 4 boincer umatlas      4096 Jun 21 22:21 pilot3
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas      6387 Jun 22 03:02 init_data.xml
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas 259418289 Jun 22 03:08 HITS.40024031._001413.pool.root.1
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas       532 Jun 22 03:08 boinc_task_state.xml
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas      1093 Jun 22 03:08 memory_monitor_summary.json
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas         0 Jun 22 03:08 agis_ddmendpoints.agis.ALL.json
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas    437473 Jun 22 03:08 log.40024031._001413.job.log.tgz.1
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas        95 Jun 22 03:09 pilot_heartbeat.json
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas      7771 Jun 22 03:09 heartbeat.json
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas      4406 Jun 22 03:09 pilotlog.txt
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas   1543282 Jun 22 03:09 log.40024031._001413.job.log.1
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas       357 Jun 22 03:09 output.list
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas       620 Jun 22 03:09 runtime_log
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas   1996800 Jun 22 03:09 result.tar.gz
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas      8192 Jun 22 03:09 boinc_mmap_file
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas        28 Jun 22 03:09 wrapper_checkpoint.txt
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas       651 Jun 22 03:09 SBjKDmQvze5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmCLYKDmjSOYbn.diag
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas     11400 Jun 22 03:09 runtime_log.err
[2024-06-22 03:09:51] -rw-r--r-- 1 boincer umatlas     21833 Jun 22 03:09 stderr.txt
[2024-06-22 03:09:51] HITS file was successfully produced:
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas 259418289 Jun 22 03:08 shared/HITS.pool.root.1
[2024-06-22 03:09:51]  *** Contents of shared directory: ***
[2024-06-22 03:09:51] total 837288
[2024-06-22 03:09:51] -rw-r--r-- 2 boincer umatlas 595449486 Jun 21 22:21 ATLAS.root_0
[2024-06-22 03:09:51] -rw-r--r-- 2 boincer umatlas     17537 Jun 21 22:21 start_atlas.sh
[2024-06-22 03:09:51] -rw-r--r-- 2 boincer umatlas    482527 Jun 21 22:21 input.tar.gz
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas 259418289 Jun 22 03:08 HITS.pool.root.1
[2024-06-22 03:09:51] -rw------- 1 boincer umatlas   1996800 Jun 22 03:09 result.tar.gz
03:09:53 (51522): run_atlas exited; CPU time 52674.083973
03:09:53 (51522): called boinc_finish(0)

</stderr_txt>
]]>

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