Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 22:18:00 (15980): Detected: vboxwrapper 26206
2024-06-21 22:18:00 (15980): Detected: BOINC client v7.20.2
2024-06-21 22:18:01 (15980): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2024-06-21 22:18:01 (15980): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 22:18:02 (15980): Create VM. (boinc_012027d8092ff029, slot#1)
2024-06-21 22:18:02 (15980): Setting Memory Size for VM. (4800MB)
2024-06-21 22:18:03 (15980): Setting CPU Count for VM. (8)
2024-06-21 22:18:03 (15980): Setting Chipset Options for VM.
2024-06-21 22:18:03 (15980): Setting Graphics Controller Options for VM.
2024-06-21 22:18:03 (15980): Setting Boot Options for VM.
2024-06-21 22:18:04 (15980): Setting Network Configuration for NAT.
2024-06-21 22:18:04 (15980): Enabling VM Network Access.
2024-06-21 22:18:04 (15980): Disabling USB Support for VM.
2024-06-21 22:18:04 (15980): Disabling COM Port Support for VM.
2024-06-21 22:18:05 (15980): Disabling LPT Port Support for VM.
2024-06-21 22:18:05 (15980): Disabling Audio Support for VM.
2024-06-21 22:18:05 (15980): Disabling Clipboard Support for VM.
2024-06-21 22:18:05 (15980): Disabling Drag and Drop Support for VM.
2024-06-21 22:18:06 (15980): Adding storage controller(s) to VM.
2024-06-21 22:18:06 (15980): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 22:18:06 (15980): Adding VirtualBox Guest Additions to VM.
2024-06-21 22:18:07 (15980): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 22:18:07 (15980): forwarding host port 62455 to guest port 80
2024-06-21 22:18:07 (15980): Enabling remote desktop for VM.
2024-06-21 22:18:07 (15980): Required extension pack not installed, remote desktop not enabled.
2024-06-21 22:18:07 (15980): Enabling shared directory for VM.
2024-06-21 22:18:08 (15980): Starting VM using VBoxManage interface. (boinc_012027d8092ff029, slot#1)
2024-06-21 22:18:13 (15980): Successfully started VM. (PID = '20016')
2024-06-21 22:18:13 (15980): Reporting VM Process ID to BOINC.
2024-06-21 22:18:13 (15980): Guest Log: BIOS: VirtualBox 6.1.34
2024-06-21 22:18:13 (15980): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 22:18:13 (15980): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 22:18:13 (15980): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 22:18:13 (15980): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 22:18:13 (15980): Detected: Web Application Enabled (http://localhost:62455)
2024-06-21 22:18:13 (15980): Preference change detected
2024-06-21 22:18:13 (15980): Setting CPU throttle for VM. (100%)
2024-06-21 22:18:13 (15980): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 22:18:15 (15980): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 22:18:15 (15980): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 22:18:17 (15980): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 22:18:17 (15980): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 22:18:17 (15980): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 22:18:25 (15980): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 22:18:25 (15980): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 22:18:29 (15980): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000133 main     Log opened 2024-06-21T22:18:27.332012000Z
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000224 main     OS Product: Linux
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000259 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000324 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000325 main     Process ID: 1366
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000326 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 22:18:29 (15980): Guest Log: 00:00:00.000913 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 22:18:29 (15980): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 22:18:29 (15980): Guest Log: [INFO] Mounting shared directory
2024-06-21 22:18:29 (15980): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 22:18:39 (15980): Guest Log: 00:00:10.031755 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 528 772 000ns (GuestNow=1 719 033 518 862 687 000 ns GuestLast=1 719 008 307 333 915 000 ns fSetTimeLastLoop=true )
2024-06-21 22:20:05 (15980): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 22:20:05 (15980): Guest Log: [INFO] Detected branch: prod
2024-06-21 22:20:05 (15980): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 22:20:05 (15980): Guest Log: Copying input files
2024-06-21 22:20:08 (15980): Guest Log: Copied input files into RunAtlas.
2024-06-21 22:20:08 (15980): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 22:20:08 (15980): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 22:20:08 (15980): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 22:20:08 (15980): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 22:22:01 (15980): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 22:22:02 (15980): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 22:22:02 (15980): Guest Log: 2.6.3.0 1689 3 32320 134155 4 1 3119737 4096000 0 65024 0 0 n/a 1141 25 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-21 22:22:02 (15980): Guest Log: copied the webapp to /var/www
2024-06-21 22:22:02 (15980): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-21 22:22:02 (15980): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-21 22:22:02 (15980): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 22:22:02 (15980): Guest Log:  *** Starting ATLAS job. (PandaID=6240166489 taskID=40024031) ***
2024-06-21 23:58:25 (15980): Status Report: Elapsed Time: '6000.000000'
2024-06-21 23:58:25 (15980): Status Report: CPU Time: '32050.890625'
2024-06-22 00:29:18 (15980): Guest Log:  *** Job finished ***
2024-06-22 00:29:18 (15980): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:05,441 | INFO     | [data] queue_monitor thread has finished
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:09,091 | INFO     | job.realtimelogging is not enabled
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:10,148 | INFO     | [payload] run_realtimelog thread has finished
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:12,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687448008512)>', '<ExcThread(monitor, started 139686529971968)>']
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:12,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:12,979 | INFO     | [monitor] control thread has ended
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,027 | INFO     | all workflow threads have been joined
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,028 | INFO     | end of generic workflow (traces error code: 0)
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,028 | INFO     | traces error code: 0
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,091 [wrapper] ==== pilot stdout END ====
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,094 [wrapper] ==== wrapper stdout RESUME ====
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,097 [wrapper] pilotpid: 6640
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:17,100 [wrapper] Pilot exit status: 0
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:18,489 [wrapper] pandaids: 6240166489
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:18,518 [wrapper] cleanup supervisor_pilot  6654 6641
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:18,521 [wrapper] Test setup, not cleaning
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:18,529 [wrapper] ==== wrapper stdout END ====
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:18,532 [wrapper] ==== wrapper stderr END ====
2024-06-22 00:29:18 (15980): Guest Log: 2024-06-22 07:29:18,538 [wrapper] apfmon messages muted
2024-06-22 00:29:18 (15980): Guest Log:  *** Error codes and diagnostics ***
2024-06-22 00:29:18 (15980): Guest Log:     "exeErrorCode": 0,
2024-06-22 00:29:18 (15980): Guest Log:     "exeErrorDiag": "",
2024-06-22 00:29:18 (15980): Guest Log:     "pilotErrorCode": 0,
2024-06-22 00:29:18 (15980): Guest Log:     "pilotErrorDiag": "",
2024-06-22 00:29:18 (15980): Guest Log:  *** Listing of results directory ***
2024-06-22 00:29:18 (15980): Guest Log: total 262956
2024-06-22 00:29:18 (15980): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 19:11 pilot3.tar.gz
2024-06-22 00:29:18 (15980): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 19:41 runpilot2-wrapper.sh
2024-06-22 00:29:18 (15980): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 19:41 queuedata.json
2024-06-22 00:29:18 (15980): Guest Log: -rwxr-xr-x. 1 atlas atlas      8666 Jun 22 05:20 init_data.xml
2024-06-22 00:29:18 (15980): Guest Log: -rwxr-xr-x. 1 atlas atlas    482525 Jun 22 05:20 input.tar.gz
2024-06-22 00:29:18 (15980): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 22 05:20 start_atlas.sh
2024-06-22 00:29:18 (15980): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 22 05:20 EVNT.40024029._000033.pool.root.1 -> /data/./ATLAS.root_0
2024-06-22 00:29:18 (15980): Guest Log: -rw-r--r--. 1 atlas atlas      2571 Jun 22 05:22 pandaJob.out
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas       424 Jun 22 05:23 setup.sh.local
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas   1025961 Jun 22 05:24 agis_schedconf.cvmfs.json
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas         0 Jun 22 05:24 agis_ddmendpoints.agis.ALL.json
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 22 05:24 cric_ddmendpoints.json
2024-06-22 00:29:18 (15980): Guest Log: drwx------. 4 atlas atlas      4096 Jun 22 05:24 pilot3
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas 264050270 Jun 22 07:27 HITS.40024031._001351.pool.root.1
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas      1031 Jun 22 07:27 memory_monitor_summary.json
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas    324584 Jun 22 07:27 log.40024031._001351.job.log.tgz.1
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas        95 Jun 22 07:28 pilot_heartbeat.json
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas      7738 Jun 22 07:28 heartbeat.json
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 22 07:29 pilotlog.txt
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas    551651 Jun 22 07:29 log.40024031._001351.job.log.1
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas       357 Jun 22 07:29 output.list
2024-06-22 00:29:18 (15980): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 22 07:29 runtime_log
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas    890880 Jun 22 07:29 result.tar.gz
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas       646 Jun 22 07:29 VOKODmWJze5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmm3mKDmUXMV7m.diag
2024-06-22 00:29:18 (15980): Guest Log: -rw-r--r--. 1 atlas atlas     10933 Jun 22 07:29 runtime_log.err
2024-06-22 00:29:18 (15980): Guest Log: Looking for outputfile HITS.40024031._001351.pool.root.1
2024-06-22 00:29:18 (15980): Guest Log: HITS file was successfully produced
2024-06-22 00:29:18 (15980): Guest Log: -rw-------. 1 atlas atlas 264050270 Jun 22 07:27 /home/atlas/RunAtlas/HITS.40024031._001351.pool.root.1
2024-06-22 00:29:19 (15980): Guest Log: Successfully finished the ATLAS job!
2024-06-22 00:29:19 (15980): Guest Log: Copying the results back to the shared directory!
2024-06-22 00:29:20 (15980): Guest Log:  *** Contents of shared directory: ***
2024-06-22 00:29:20 (15980): Guest Log: total 841920
2024-06-22 00:29:20 (15980): Guest Log: -rwxrwxrwx. 1 root root 596661797 Jun 22 05:18 ATLAS.root_0
2024-06-22 00:29:20 (15980): Guest Log: -rwxrwxrwx. 1 root root 264050270 Jun 22 07:29 HITS.pool.root.1
2024-06-22 00:29:20 (15980): Guest Log: -rwxrwxrwx. 1 root root      8666 Jun 22 05:18 init_data.xml
2024-06-22 00:29:20 (15980): Guest Log: -rwxrwxrwx. 1 root root    482525 Jun 22 01:32 input.tar.gz
2024-06-22 00:29:20 (15980): Guest Log: -rwxrwxrwx. 1 root root    890880 Jun 22 07:29 result.tar.gz
2024-06-22 00:29:20 (15980): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 22 01:32 start_atlas.sh
2024-06-22 00:29:20 (15980): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-22 00:29:20 (15980): VM Completion File Detected.
2024-06-22 00:29:20 (15980): Powering off VM.
2024-06-22 00:29:21 (15980): Successfully stopped VM.
2024-06-22 00:29:21 (15980): Deregistering VM. (boinc_012027d8092ff029, slot#1)
2024-06-22 00:29:21 (15980): Removing network bandwidth throttle group from VM.
2024-06-22 00:29:21 (15980): Removing VM from VirtualBox.
00:29:26 (15980): called boinc_finish(0)

</stderr_txt>
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