Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:10:44 (192220): wrapper (7.7.26015): starting
06:10:44 (192220): wrapper: running run_atlas (--nthreads 12)
[2024-06-22 06:10:44] Arguments: --nthreads 12
[2024-06-22 06:10:44] Threads: 12
[2024-06-22 06:10:44] Checking for CVMFS
[2024-06-22 06:10:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 06:10:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 06:10:44] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 06:10:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 06:10:44] 2.10.1.0 2816 224103 123500 134166 3 192 26095192 45568000 8133 130560 0 1335359628 99.753 876326079 19219 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-22 06:10:44] CVMFS is ok
[2024-06-22 06:10:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 06:10:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 06:10:44] Further information can be found at the LHC@home message board.
[2024-06-22 06:10:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 06:10:44] Checking for apptainer binary...
[2024-06-22 06:10:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 06:10:44] Running /usr/bin/apptainer --version
[2024-06-22 06:10:44] apptainer version 1.3.2-1.el7
[2024-06-22 06:10:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 06:10:45] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0074.triumf.lcg
[2024-06-22 06:10:45] apptainer works
[2024-06-22 06:10:45] Set ATHENA_PROC_NUMBER=12
[2024-06-22 06:10:45] Set ATHENA_CORE_NUMBER=12
[2024-06-22 06:10:46] Starting ATLAS job with PandaID=6240007521
[2024-06-22 06:10:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 12:19:26]  *** The last 200 lines of the pilot log: ***
[2024-06-22 12:19:27] 2024-06-22 19:18:54,347 | INFO     | model: linear, x: [1719061877.0, 1719061938.0, 1719061999.0, 1719062060.0, 1719062121.0, 1719062182.0, 1719062246.0, 1719062304.0, 1719062367.0, 1719062431.0, 1719
[2024-06-22 12:19:27] 2024-06-22 19:18:54,347 | INFO     | sum of square deviations: 13986343269.011284
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | sum of deviations: 422981799515.78674
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | mean x: 1719072706.1910112
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | mean y: 2639913.120786517
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | -- intersect: -51986393444.456
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | intersect: -51986393444.456
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | chi2: 6.994737101529814
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | current chi2=6.994737101529814 (change=18.77406650400272 %)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,349 | INFO     | right removable region: 355
[2024-06-22 12:19:27] 2024-06-22 19:18:54,350 | INFO     | model: linear, x: [1719062182.0, 1719062246.0, 1719062304.0, 1719062367.0, 1719062431.0, 1719062488.0, 1719062548.0, 1719062613.0, 1719062670.0, 1719062731.0, 1719
[2024-06-22 12:19:27] 2024-06-22 19:18:54,350 | INFO     | sum of square deviations: 13986146485.775244
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | sum of deviations: 273398719572.202
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | mean x: 1719073011.213483
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | mean y: 2653850.9578651683
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | -- intersect: -33601481540.796146
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | intersect: -33601481540.796146
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | chi2: 5.949515300729526
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | current chi2=5.949515300729526 (change=30.911637258706637 %)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | model: linear, x: [1719062488.0, 1719062548.0, 1719062613.0, 1719062670.0, 1719062731.0, 1719062795.0, 1719062858.0, 1719062914.0, 1719062975.0, 1719063042.0, 1719
[2024-06-22 12:19:27] 2024-06-22 19:18:54,352 | INFO     | sum of square deviations: 13404937674.359074
[2024-06-22 12:19:27] 2024-06-22 19:18:54,354 | INFO     | sum of deviations: 182700728005.47876
[2024-06-22 12:19:27] 2024-06-22 19:18:54,354 | INFO     | mean x: 1719073163.7094016
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | mean y: 2677644.6125356127
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | -- intersect: -23427190224.53487
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | intersect: -23427190224.53487
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | chi2: 4.001218977470716
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | current chi2=4.001218977470716 (change=32.747143671013184 %)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | model: linear, x: [1719062795.0, 1719062858.0, 1719062914.0, 1719062975.0, 1719063042.0, 1719063099.0, 1719063165.0, 1719063222.0, 1719063281.0, 1719063343.0, 1719
[2024-06-22 12:19:27] 2024-06-22 19:18:54,355 | INFO     | sum of square deviations: 12839949041.306358
[2024-06-22 12:19:27] 2024-06-22 19:18:54,357 | INFO     | sum of deviations: 98809748312.85556
[2024-06-22 12:19:27] 2024-06-22 19:18:54,357 | INFO     | mean x: 1719073316.2196531
[2024-06-22 12:19:27] 2024-06-22 19:18:54,357 | INFO     | mean y: 2700279.4624277456
[2024-06-22 12:19:27] 2024-06-22 19:18:54,357 | INFO     | -- intersect: -13226417777.047235
[2024-06-22 12:19:27] 2024-06-22 19:18:54,357 | INFO     | intersect: -13226417777.047235
[2024-06-22 12:19:27] 2024-06-22 19:18:54,358 | INFO     | chi2: 2.34455301670447
[2024-06-22 12:19:27] 2024-06-22 19:18:54,358 | INFO     | current chi2=2.34455301670447 (change=41.404031373795775 %)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,358 | INFO     | model: linear, x: [1719063099.0, 1719063165.0, 1719063222.0, 1719063281.0, 1719063343.0, 1719063402.0, 1719063463.0, 1719063527.0, 1719063593.0, 1719063646.0, 1719
[2024-06-22 12:19:27] 2024-06-22 19:18:54,358 | INFO     | sum of square deviations: 12291243299.085096
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | sum of deviations: 55971924500.34029
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | mean x: 1719073468.7038124
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | mean y: 2712173.815249267
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | -- intersect: -7825613086.656165
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | intersect: -7825613086.656165
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | chi2: 1.9459930726780301
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | current chi2=1.9459930726780301 (change=16.999399936225814 %)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,360 | INFO     | left removable region: 40
[2024-06-22 12:19:27] 2024-06-22 19:18:54,361 | INFO     | model: linear, x: [1719064336.0, 1719064387.0, 1719064447.0, 1719064505.0, 1719064567.0, 1719064631.0, 1719064690.0, 1719064754.0, 1719064807.0, 1719064877.0, 1719
[2024-06-22 12:19:27] 2024-06-22 19:18:54,361 | INFO     | sum of square deviations: 9687829175.885727
[2024-06-22 12:19:27] 2024-06-22 19:18:54,362 | INFO     | sum of deviations: 51932436623.39999
[2024-06-22 12:19:27] 2024-06-22 19:18:54,362 | INFO     | mean x: 1719073895.647619
[2024-06-22 12:19:27] 2024-06-22 19:18:54,362 | INFO     | mean y: 2742011.4
[2024-06-22 12:19:27] 2024-06-22 19:18:54,362 | INFO     | -- intersect: -9212500589.99518
[2024-06-22 12:19:27] 2024-06-22 19:18:54,363 | INFO     | intersect: -9212500589.99518
[2024-06-22 12:19:27] 2024-06-22 19:18:54,363 | INFO     | chi2: 0.016397132673892388
[2024-06-22 12:19:27] 2024-06-22 19:18:54,363 | INFO     | -- intersect: -9212500589.99518
[2024-06-22 12:19:27] 2024-06-22 19:18:54,363 | INFO     | current memory leak: 5.36 B/s (using 315 data points, chi2=0.02)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,363 | INFO     | ..............................
[2024-06-22 12:19:27] 2024-06-22 19:18:54,363 | INFO     | . Timing measurements:
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . get job = 0 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . initial setup = 2 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . payload setup = 4 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . stage-in = 0 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . payload execution = 22009 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . stage-out = 14 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | . log creation = 0 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,364 | INFO     | ..............................
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | 
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | job summary report
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | --------------------------------------------------
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | PanDA job id: 6240007521
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | task id: 38921001
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | errors: (none)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | pilot state: finished 
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | transexitcode: 0
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | exeerrorcode: 0
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | exeerrordiag: 
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | exitcode: 0
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | exitmsg: OK
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | cpuconsumptiontime: 87353 s
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | nevents: 400
[2024-06-22 12:19:27] 2024-06-22 19:18:54,417 | INFO     | neventsw: 0
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | pid: 213643
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | pgrp: 213643
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | corecount: 12
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | event service: False
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | sizes: {0: 2385523, 1: 2387056, 4: 2387262, 11: 2387290, 22014: 2420721, 22016: 2420720, 22032: 2429858, 22033: 2429914, 22066: 2430084}
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | --------------------------------------------------
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | 
[2024-06-22 12:19:27] 2024-06-22 19:18:54,418 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | job 6240007521 has completed (purged errors)
[2024-06-22 12:19:27] 2024-06-22 19:18:54,438 | INFO     | overall cleanup function is called
[2024-06-22 12:19:27] 2024-06-22 19:18:55,444 | INFO     | --- collectZombieJob: --- 10, [213643]
[2024-06-22 12:19:27] 2024-06-22 19:18:55,445 | INFO     | zombie collector waiting for pid 213643
[2024-06-22 12:19:27] 2024-06-22 19:18:55,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 12:19:27] 2024-06-22 19:18:56,450 | INFO     | collected zombie processes
[2024-06-22 12:19:27] 2024-06-22 19:18:56,451 | INFO     | will now attempt to kill all subprocesses of pid=213643
[2024-06-22 12:19:27] 2024-06-22 19:19:01,415 | INFO     | process IDs to be killed: [213643] (in reverse order)
[2024-06-22 12:19:27] 2024-06-22 19:19:01,608 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 12:19:27] 2024-06-22 19:19:01,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 12:19:27] 2024-06-22 19:19:02,019 | INFO     | did not find any defunct processes belonging to 213643
[2024-06-22 12:19:27] 2024-06-22 19:19:02,920 | INFO     | did not find any defunct processes belonging to 213643
[2024-06-22 12:19:27] 2024-06-22 19:19:02,920 | INFO     | ready for new job
[2024-06-22 12:19:27] 2024-06-22 19:19:02,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 12:19:27] 2024-06-22 19:19:04,192 | INFO     | *************************************
[2024-06-22 12:19:27] 2024-06-22 19:19:04,192 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 12:19:27] 2024-06-22 19:19:04,192 | INFO     | *************************************
[2024-06-22 12:19:27] 2024-06-22 19:19:04,192 | INFO     | 
[2024-06-22 12:19:27] 2024-06-22 19:19:04,497 | INFO     | architecture information:
[2024-06-22 12:19:27] 2024-06-22 19:19:04,547 | INFO     | executing command: cat /etc/os-release
[2024-06-22 12:19:27] 2024-06-22 19:19:05,979 | INFO     | cat /etc/os-release:
[2024-06-22 12:19:27] NAME="CentOS Linux"
[2024-06-22 12:19:27] VERSION="7 (Core)"
[2024-06-22 12:19:27] ID="centos"
[2024-06-22 12:19:27] ID_LIKE="rhel fedora"
[2024-06-22 12:19:27] VERSION_ID="7"
[2024-06-22 12:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 12:19:27] ANSI_COLOR="0;31"
[2024-06-22 12:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 12:19:27] HOME_URL="https://www.centos.org/"
[2024-06-22 12:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 12:19:27] 
[2024-06-22 12:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 12:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 12:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 12:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 12:19:27] 
[2024-06-22 12:19:27] 2024-06-22 19:19:05,979 | INFO     | *************************************
[2024-06-22 12:19:27] 2024-06-22 19:19:06,483 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-22 12:19:27] 2024-06-22 19:19:08,277 | INFO     | sufficient remaining disk space (2060935233536 B)
[2024-06-22 12:19:27] 2024-06-22 19:19:08,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 12:19:27] 2024-06-22 19:19:08,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 12:19:27] 2024-06-22 19:19:08,279 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 12:19:27] 2024-06-22 19:19:08,279 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 12:19:27] 2024-06-22 19:19:08,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 12:19:27] 2024-06-22 19:19:08,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 12:19:27] 2024-06-22 19:19:08,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 12:19:27] 2024-06-22 19:19:08,343 | INFO     | all data control threads have been joined
[2024-06-22 12:19:27] 2024-06-22 19:19:08,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 12:19:27] 2024-06-22 19:19:08,537 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 12:19:27] 2024-06-22 19:19:08,538 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 12:19:27] 2024-06-22 19:19:08,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 12:19:27] 2024-06-22 19:19:08,538 | INFO     | will abort loop
[2024-06-22 12:19:27] 2024-06-22 19:19:09,027 | INFO     | all job control threads have been joined
[2024-06-22 12:19:27] 2024-06-22 19:19:09,284 | INFO     | [job] retrieve thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,351 | INFO     | [job] queue monitor thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,397 | INFO     | all payload control threads have been joined
[2024-06-22 12:19:27] 2024-06-22 19:19:09,404 | INFO     | [data] control thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 12:19:27] 2024-06-22 19:19:09,544 | INFO     | [job] job monitor thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,849 | INFO     | [payload] failed_post thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,913 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,916 | INFO     | [job] validate thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:09,990 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,034 | INFO     | [job] control thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,336 | INFO     | [data] copytool_out thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,404 | INFO     | [payload] control thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,467 | INFO     | [data] copytool_in thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,527 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,587 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:10,789 | INFO     | [payload] validate_post thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:13,464 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 12:19:27] 2024-06-22 19:19:15,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986431534912)>', '<ExcThread(monitor, started 139986215487232)>']
[2024-06-22 12:19:27] 2024-06-22 19:19:15,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 12:19:27] 2024-06-22 19:19:15,416 | INFO     | [monitor] control thread has ended
[2024-06-22 12:19:27] 2024-06-22 19:19:20,183 | INFO     | all workflow threads have been joined
[2024-06-22 12:19:27] 2024-06-22 19:19:20,184 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 12:19:27] 2024-06-22 19:19:20,184 | INFO     | traces error code: 0
[2024-06-22 12:19:27] 2024-06-22 19:19:20,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 12:19:27] 2024-06-22 19:19:23,786 [wrapper] ==== pilot stdout END ====
[2024-06-22 12:19:27] 2024-06-22 19:19:23,788 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 12:19:27] 2024-06-22 19:19:23,790 [wrapper] pilotpid: 196372
[2024-06-22 12:19:27] 2024-06-22 19:19:23,792 [wrapper] Pilot exit status: 0
[2024-06-22 12:19:27] 2024-06-22 19:19:24,148 [wrapper] pandaids: 6240007521
[2024-06-22 12:19:27] 2024-06-22 19:19:24,199 [wrapper] cleanup supervisor_pilot 274081 196373
[2024-06-22 12:19:27] 2024-06-22 19:19:24,201 [wrapper] Test setup, not cleaning
[2024-06-22 12:19:27] 2024-06-22 19:19:24,203 [wrapper] ==== wrapper stdout END ====
[2024-06-22 12:19:27] 2024-06-22 19:19:24,205 [wrapper] ==== wrapper stderr END ====
[2024-06-22 12:19:27] 2024-06-22 19:19:24,209 [wrapper] apfmon messages muted
[2024-06-22 12:19:27]  *** Error codes and diagnostics ***
[2024-06-22 12:19:27]     "exeErrorCode": 0,
[2024-06-22 12:19:27]     "exeErrorDiag": "",
[2024-06-22 12:19:27]     "pilotErrorCode": 0,
[2024-06-22 12:19:27]     "pilotErrorDiag": "",
[2024-06-22 12:19:27]  *** Listing of results directory ***
[2024-06-22 12:19:27] total 958588
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc    469766 Jun 21 10:43 pilot3.tar.gz
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc      5654 Jun 21 10:59 queuedata.json
[2024-06-22 12:19:27] -rwx------ 1 boinc boinc     32308 Jun 21 10:59 runpilot2-wrapper.sh
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc       100 Jun 22 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 12:19:27] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 06:10 run_atlas
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc       105 Jun 22 06:10 job.xml
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc      6628 Jun 22 06:10 init_data.xml
[2024-06-22 12:19:27] -rw-r--r-- 2 boinc boinc 615590358 Jun 22 06:10 EVNT.38776190._000912.pool.root.1
[2024-06-22 12:19:27] -rw-r--r-- 2 boinc boinc     17537 Jun 22 06:10 start_atlas.sh
[2024-06-22 12:19:27] drwxrwx--x 2 boinc boinc      4096 Jun 22 06:10 shared
[2024-06-22 12:19:27] -rw-r--r-- 2 boinc boinc    482535 Jun 22 06:10 input.tar.gz
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc         0 Jun 22 06:10 boinc_lockfile
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc      2653 Jun 22 06:10 pandaJob.out
[2024-06-22 12:19:27] -rw------- 1 boinc boinc       424 Jun 22 06:10 setup.sh.local
[2024-06-22 12:19:27] -rw------- 1 boinc boinc   1025938 Jun 22 06:10 agis_schedconf.cvmfs.json
[2024-06-22 12:19:27] -rw------- 1 boinc boinc   1321363 Jun 22 06:10 cric_ddmendpoints.json
[2024-06-22 12:19:27] drwx------ 4 boinc boinc      4096 Jun 22 06:10 pilot3
[2024-06-22 12:19:27] -rw------- 1 boinc boinc 357140960 Jun 22 12:15 HITS.38921001._064215.pool.root.1
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc       532 Jun 22 12:15 boinc_task_state.xml
[2024-06-22 12:19:27] -rw------- 1 boinc boinc      1065 Jun 22 12:18 memory_monitor_summary.json
[2024-06-22 12:19:27] -rw------- 1 boinc boinc         0 Jun 22 12:18 agis_ddmendpoints.agis.ALL.json
[2024-06-22 12:19:27] -rw------- 1 boinc boinc    545355 Jun 22 12:18 log.38921001._064215.job.log.tgz.1
[2024-06-22 12:19:27] -rw------- 1 boinc boinc        95 Jun 22 12:18 pilot_heartbeat.json
[2024-06-22 12:19:27] -rw------- 1 boinc boinc      7779 Jun 22 12:18 heartbeat.json
[2024-06-22 12:19:27] -rw------- 1 boinc boinc      4519 Jun 22 12:19 pilotlog.txt
[2024-06-22 12:19:27] -rw------- 1 boinc boinc   2117169 Jun 22 12:19 log.38921001._064215.job.log.1
[2024-06-22 12:19:27] -rw------- 1 boinc boinc       357 Jun 22 12:19 output.list
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc       620 Jun 22 12:19 runtime_log
[2024-06-22 12:19:27] -rw------- 1 boinc boinc   2682880 Jun 22 12:19 result.tar.gz
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc     11287 Jun 22 12:19 runtime_log.err
[2024-06-22 12:19:27] -rw------- 1 boinc boinc       659 Jun 22 12:19 BqvKDmTjxe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmazmKDmNKoShn.diag
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc        28 Jun 22 12:19 wrapper_checkpoint.txt
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc      8192 Jun 22 12:19 boinc_mmap_file
[2024-06-22 12:19:27] -rw-r--r-- 1 boinc boinc     22002 Jun 22 12:19 stderr.txt
[2024-06-22 12:19:28] HITS file was successfully produced:
[2024-06-22 12:19:29] -rw------- 1 boinc boinc 357140960 Jun 22 12:15 shared/HITS.pool.root.1
[2024-06-22 12:19:29]  *** Contents of shared directory: ***
[2024-06-22 12:19:29] total 953056
[2024-06-22 12:19:29] -rw-r--r-- 2 boinc boinc 615590358 Jun 22 06:10 ATLAS.root_0
[2024-06-22 12:19:29] -rw-r--r-- 2 boinc boinc     17537 Jun 22 06:10 start_atlas.sh
[2024-06-22 12:19:29] -rw-r--r-- 2 boinc boinc    482535 Jun 22 06:10 input.tar.gz
[2024-06-22 12:19:29] -rw------- 1 boinc boinc 357140960 Jun 22 12:15 HITS.pool.root.1
[2024-06-22 12:19:29] -rw------- 1 boinc boinc   2682880 Jun 22 12:19 result.tar.gz
12:19:32 (192220): run_atlas exited; CPU time 86936.493725
12:19:32 (192220): called boinc_finish(0)

</stderr_txt>
]]>

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