Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:53:56 (3941614): wrapper (7.7.26015): starting
17:53:56 (3941614): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 17:53:56] Arguments: --nthreads 4
[2024-06-22 17:53:56] Threads: 4
[2024-06-22 17:53:56] Checking for CVMFS
[2024-06-22 17:53:56] No cvmfs_config command found, will try listing directly
[2024-06-22 17:53:56] CVMFS is ok
[2024-06-22 17:53:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 17:53:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 17:53:56] Further information can be found at the LHC@home message board.
[2024-06-22 17:53:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 17:53:56] Checking for apptainer binary...
[2024-06-22 17:53:56] which: no apptainer in ((null))
[2024-06-22 17:53:56] apptainer is not installed, using version from CVMFS
[2024-06-22 17:53:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 17:53:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-22 17:53:56] apptainer works
[2024-06-22 17:53:57] Set ATHENA_PROC_NUMBER=4
[2024-06-22 17:53:57] Set ATHENA_CORE_NUMBER=4
[2024-06-22 17:53:57] Starting ATLAS job with PandaID=6239995103
[2024-06-22 17:53:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 17:55:12]  *** The last 200 lines of the pilot log: ***
[2024-06-22 17:55:12] 2024-06-22 15:54:56,454 | INFO     | using path: /scratch/boinc/var/slot112/slots/1/PanDA_Pilot-6239995103/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | INFO     | extracted standard info from prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | WARNING  | GPU info not found in prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | found no stored workdir sizes
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | WARNING  | wrong length of table data, x=[1719071672.0], y=[29249.0] (must be same and length>=4)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | ..............................
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . Timing measurements:
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . get job = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . initial setup = 3 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . payload setup = 4 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . stage-in = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . payload execution = 14 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . stage-out = 4 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | . log creation = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | ..............................
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot112/slots/1/PanDA_Pilot-6239995103/pilotlog.txt
[2024-06-22 17:55:12] 2024-06-22 15:54:56,472 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 17:55:12] - Log from pilotlog.txt -
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | INFO     | extracted standard info from prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | WARNING  | GPU info not found in prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | found no stored workdir sizes
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | WARNING  | wrong length of table data, x=[1719071672.0], y=[29249.0] (must be same and length>=4)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | ..............................
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . Timing measurements:
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . get job = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . initial setup = 3 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . payload setup = 4 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . stage-in = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . payload execution = 14 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . stage-out = 4 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | . log creation = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | ..............................
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot112/slots/1/PanDA_Pilot-6239995103/pilotlog.txt
[2024-06-22 17:55:12] 2024-06-22 15:54:56,472 | WARNING  | 
[2024-06-22 17:55:12] [begin log extracts]
[2024-06-22 17:55:12] - Log from pilotlog.txt -
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | INFO     | extracted standard info from prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,455 | WARNING  | GPU info not found in prmon json
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | WARNING  | found no stored workdir sizes
[2024-06-22 17:55:12] 2024-06-22 15:54:56,456 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | WARNING  | wrong length of table data, x=[1719071672.0], y=[29249.0] (must be same and length>=4)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | ..............................
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . Timing measurements:
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . get job = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . initial setup = 3 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . payload setup = 4 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . stage-in = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . payload execution = 14 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,457 | INFO     | . stage-out = 4 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | . log creation = 0 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | ..............................
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 17:55:12] 2024-06-22 15:54:56,458 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot112/slots/1/PanDA_Pilot-6239995103/pilotlog.txt
[2024-06-22 17:55:12] [end log extracts]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,472 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,472 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 17:54:39,512 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 17:55:12] 2024-06-22 15:54:56,584 | INFO     | 
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | job summary report
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | --------------------------------------------------
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | PanDA job id: 6239995103
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | task id: 38921001
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 17:54:39,512 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | pilot state: failed 
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | transexitcode: 65
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | exeerrorcode: 65
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | exitcode: 65
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | cpuconsumptiontime: 19 s
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | nevents: 0
[2024-06-22 17:55:12] 2024-06-22 15:54:56,585 | INFO     | neventsw: 0
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | pid: 3966815
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | pgrp: 3966815
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | corecount: 4
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | event service: False
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | sizes: {0: 2386237, 1: 2387172, 5: 2387378, 12: 2387434, 27: 2410565, 28: 2414958, 30: 2414986, 32: 2414930, 34: 2415128}
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | --------------------------------------------------
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | 
[2024-06-22 17:55:12] 2024-06-22 15:54:56,586 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | job 6239995103 has completed (purged errors)
[2024-06-22 17:55:12] 2024-06-22 15:54:56,607 | INFO     | overall cleanup function is called
[2024-06-22 17:55:12] 2024-06-22 15:54:57,613 | INFO     | --- collectZombieJob: --- 10, [3966815]
[2024-06-22 17:55:12] 2024-06-22 15:54:57,614 | INFO     | zombie collector waiting for pid 3966815
[2024-06-22 17:55:12] 2024-06-22 15:54:57,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 17:55:12] 2024-06-22 15:54:58,619 | INFO     | collected zombie processes
[2024-06-22 17:55:12] 2024-06-22 15:54:58,619 | INFO     | will now attempt to kill all subprocesses of pid=3966815
[2024-06-22 17:55:12] 2024-06-22 15:54:58,766 | INFO     | process IDs to be killed: [3966815] (in reverse order)
[2024-06-22 17:55:12] 2024-06-22 15:54:58,894 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 17:55:12] 2024-06-22 15:54:58,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 17:55:12] 2024-06-22 15:54:58,911 | INFO     | did not find any defunct processes belonging to 3966815
[2024-06-22 17:55:12] 2024-06-22 15:54:58,924 | INFO     | did not find any defunct processes belonging to 3966815
[2024-06-22 17:55:12] 2024-06-22 15:54:58,924 | INFO     | ready for new job
[2024-06-22 17:55:12] 2024-06-22 15:54:58,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 17:55:12] 2024-06-22 15:54:58,925 | INFO     | *************************************
[2024-06-22 17:55:12] 2024-06-22 15:54:58,925 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 17:55:12] 2024-06-22 15:54:58,926 | INFO     | *************************************
[2024-06-22 17:55:12] 2024-06-22 15:54:58,926 | INFO     | 
[2024-06-22 17:55:12] 2024-06-22 15:54:58,935 | INFO     | architecture information:
[2024-06-22 17:55:12] 2024-06-22 15:54:58,935 | INFO     | executing command: cat /etc/os-release
[2024-06-22 17:55:12] 2024-06-22 15:54:58,949 | INFO     | cat /etc/os-release:
[2024-06-22 17:55:12] NAME="CentOS Linux"
[2024-06-22 17:55:12] VERSION="7 (Core)"
[2024-06-22 17:55:12] ID="centos"
[2024-06-22 17:55:12] ID_LIKE="rhel fedora"
[2024-06-22 17:55:12] VERSION_ID="7"
[2024-06-22 17:55:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 17:55:12] ANSI_COLOR="0;31"
[2024-06-22 17:55:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 17:55:12] HOME_URL="https://www.centos.org/"
[2024-06-22 17:55:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 17:55:12] 
[2024-06-22 17:55:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 17:55:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 17:55:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 17:55:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 17:55:12] 
[2024-06-22 17:55:12] 2024-06-22 15:54:58,949 | INFO     | *************************************
[2024-06-22 17:55:12] 2024-06-22 15:54:59,452 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-06-22 17:55:12] 2024-06-22 15:54:59,466 | INFO     | sufficient remaining disk space (3164633825280 B)
[2024-06-22 17:55:12] 2024-06-22 15:54:59,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 17:55:12] 2024-06-22 15:54:59,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 17:55:12] 2024-06-22 15:54:59,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 17:55:12] 2024-06-22 15:54:59,467 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 17:55:12] 2024-06-22 15:54:59,468 | INFO     | aborting loop
[2024-06-22 17:55:12] 2024-06-22 15:54:59,468 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 17:55:12] 2024-06-22 15:54:59,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 17:55:12] 2024-06-22 15:54:59,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 17:55:12] 2024-06-22 15:54:59,633 | INFO     | all data control threads have been joined
[2024-06-22 17:55:12] 2024-06-22 15:55:00,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 17:55:12] 2024-06-22 15:55:00,456 | INFO     | all payload control threads have been joined
[2024-06-22 17:55:12] 2024-06-22 15:55:00,472 | INFO     | [job] retrieve thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,473 | INFO     | [job] job monitor thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,568 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,578 | INFO     | [job] validate thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,639 | INFO     | [data] control thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,667 | INFO     | all job control threads have been joined
[2024-06-22 17:55:12] 2024-06-22 15:55:00,797 | INFO     | [payload] failed_post thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,831 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:00,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 17:55:12] 2024-06-22 15:55:01,022 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:01,462 | INFO     | [payload] control thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:01,534 | INFO     | [payload] validate_post thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:01,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 17:55:12] 2024-06-22 15:55:01,624 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:01,673 | INFO     | [job] control thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:01,960 | INFO     | [data] copytool_in thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:02,601 | INFO     | [job] queue monitor thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:02,843 | INFO     | [data] copytool_out thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:04,338 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 17:55:12] 2024-06-22 15:55:06,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47634613773376)>', '<ExcThread(monitor, started 47635215943424)>']
[2024-06-22 17:55:12] 2024-06-22 15:55:06,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 17:55:12] 2024-06-22 15:55:06,505 | INFO     | [monitor] control thread has ended
[2024-06-22 17:55:12] 2024-06-22 15:55:11,181 | INFO     | all workflow threads have been joined
[2024-06-22 17:55:12] 2024-06-22 15:55:11,181 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 17:55:12] 2024-06-22 15:55:11,181 | INFO     | traces error code: 0
[2024-06-22 17:55:12] 2024-06-22 15:55:11,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 17:55:12] 2024-06-22 15:55:11,274 [wrapper] ==== pilot stdout END ====
[2024-06-22 17:55:12] 2024-06-22 15:55:11,276 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 17:55:12] 2024-06-22 15:55:11,277 [wrapper] pilotpid: 3947011
[2024-06-22 17:55:12] 2024-06-22 15:55:11,279 [wrapper] Pilot exit status: 0
[2024-06-22 17:55:12] 2024-06-22 15:55:11,285 [wrapper] pandaids: 6239995103
[2024-06-22 17:55:12] 2024-06-22 15:55:11,374 [wrapper] cleanup supervisor_pilot 3947016 3947012
[2024-06-22 17:55:12] 2024-06-22 15:55:11,377 [wrapper] Test setup, not cleaning
[2024-06-22 17:55:12] 2024-06-22 15:55:11,378 [wrapper] ==== wrapper stdout END ====
[2024-06-22 17:55:12] 2024-06-22 15:55:11,380 [wrapper] ==== wrapper stderr END ====
[2024-06-22 17:55:12] 2024-06-22 15:55:11,383 [wrapper] apfmon messages muted
[2024-06-22 17:55:12]  *** Error codes and diagnostics ***
[2024-06-22 17:55:12]     "exeErrorCode": 65,
[2024-06-22 17:55:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 17:55:12]     "pilotErrorCode": 1305,
[2024-06-22 17:55:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 17:54:39,512 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 17:55:12]  *** Listing of results directory ***
[2024-06-22 17:55:12] total 604712
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc    469766 Jun 21 19:43 pilot3.tar.gz
[2024-06-22 17:55:12] -rwx------ 1 boinc boinc     32308 Jun 21 19:54 runpilot2-wrapper.sh
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc      5654 Jun 21 19:54 queuedata.json
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc       100 Jun 22 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 17:55:12] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 17:32 run_atlas
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc       105 Jun 22 17:32 job.xml
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc      6644 Jun 22 17:53 init_data.xml
[2024-06-22 17:55:12] -rw-r--r-- 2 boinc boinc 616549949 Jun 22 17:53 EVNT.38776190._000879.pool.root.1
[2024-06-22 17:55:12] -rw-r--r-- 2 boinc boinc     17537 Jun 22 17:53 start_atlas.sh
[2024-06-22 17:55:12] drwxrwx--x 2 boinc boinc      4096 Jun 22 17:53 shared
[2024-06-22 17:55:12] -rw-r--r-- 2 boinc boinc    482529 Jun 22 17:53 input.tar.gz
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc         0 Jun 22 17:53 boinc_lockfile
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc      2654 Jun 22 17:53 pandaJob.out
[2024-06-22 17:55:12] -rw------- 1 boinc boinc       424 Jun 22 17:53 setup.sh.local
[2024-06-22 17:55:12] -rw------- 1 boinc boinc         0 Jun 22 17:54 agis_schedconf.cvmfs.json
[2024-06-22 17:55:12] -rw------- 1 boinc boinc         0 Jun 22 17:54 agis_schedconf.agis.BOINC_MCORE.json
[2024-06-22 17:55:12] -rw------- 1 boinc boinc         0 Jun 22 17:54 agis_ddmendpoints.agis.ALL.json
[2024-06-22 17:55:12] -rw------- 1 boinc boinc   1321363 Jun 22 17:54 cric_ddmendpoints.json
[2024-06-22 17:55:12] -rw------- 1 boinc boinc        94 Jun 22 17:54 pilot_heartbeat.json
[2024-06-22 17:55:12] drwx------ 4 boinc boinc      4096 Jun 22 17:54 pilot3
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc       523 Jun 22 17:54 boinc_task_state.xml
[2024-06-22 17:55:12] -rw------- 1 boinc boinc       948 Jun 22 17:54 memory_monitor_summary.json
[2024-06-22 17:55:12] -rw------- 1 boinc boinc     19786 Jun 22 17:54 log.38921001._064209.job.log.tgz.1
[2024-06-22 17:55:12] -rw------- 1 boinc boinc      8356 Jun 22 17:54 heartbeat.json
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc      8192 Jun 22 17:55 boinc_mmap_file
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc        21 Jun 22 17:55 wrapper_checkpoint.txt
[2024-06-22 17:55:12] -rw------- 1 boinc boinc      4346 Jun 22 17:55 pilotlog.txt
[2024-06-22 17:55:12] -rw------- 1 boinc boinc     67461 Jun 22 17:55 log.38921001._064209.job.log.1
[2024-06-22 17:55:12] -rw------- 1 boinc boinc       188 Jun 22 17:55 output.list
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc       620 Jun 22 17:55 runtime_log
[2024-06-22 17:55:12] -rw------- 1 boinc boinc    102400 Jun 22 17:55 result.tar.gz
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc     11274 Jun 22 17:55 runtime_log.err
[2024-06-22 17:55:12] -rw------- 1 boinc boinc       633 Jun 22 17:55 X6pMDmOexe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmcNrKDmS8ripm.diag
[2024-06-22 17:55:12] -rw-r--r-- 1 boinc boinc     21429 Jun 22 17:55 stderr.txt
[2024-06-22 17:55:12] No HITS result produced
[2024-06-22 17:55:12]  *** Contents of shared directory: ***
[2024-06-22 17:55:12] total 602696
[2024-06-22 17:55:12] -rw-r--r-- 2 boinc boinc 616549949 Jun 22 17:53 ATLAS.root_0
[2024-06-22 17:55:12] -rw-r--r-- 2 boinc boinc     17537 Jun 22 17:53 start_atlas.sh
[2024-06-22 17:55:12] -rw-r--r-- 2 boinc boinc    482529 Jun 22 17:53 input.tar.gz
[2024-06-22 17:55:12] -rw------- 1 boinc boinc    102400 Jun 22 17:55 result.tar.gz
17:55:13 (3941614): run_atlas exited; CPU time 19.377290
17:55:13 (3941614): called boinc_finish(0)

</stderr_txt>
]]>

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