Name 9ShNDmWNxe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmXymKDmjapVRn_0
Workunit 223690910
Created 21 Jun 2024, 17:37:41 UTC
Sent 21 Jun 2024, 23:32:25 UTC
Report deadline 29 Jun 2024, 23:32:25 UTC
Received 22 Jun 2024, 18:08:44 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10688968
Run time 4 min 33 sec
CPU time 21 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 14.34 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 300.32 MB
Peak swap size 1.35 GB
Peak disk usage 1.01 GB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:57 (2133980): wrapper (7.7.26015): starting
20:01:57 (2133980): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 20:01:57] Arguments: --nthreads 4
[2024-06-22 20:01:57] Threads: 4
[2024-06-22 20:01:57] Checking for CVMFS
[2024-06-22 20:01:57] No cvmfs_config command found, will try listing directly
[2024-06-22 20:01:57] CVMFS is ok
[2024-06-22 20:01:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 20:01:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 20:01:57] Further information can be found at the LHC@home message board.
[2024-06-22 20:01:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 20:01:57] Checking for apptainer binary...
[2024-06-22 20:01:57] which: no apptainer in ((null))
[2024-06-22 20:01:57] apptainer is not installed, using version from CVMFS
[2024-06-22 20:01:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 20:01:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-22 20:01:58] apptainer works
[2024-06-22 20:01:58] Set ATHENA_PROC_NUMBER=4
[2024-06-22 20:01:58] Set ATHENA_CORE_NUMBER=4
[2024-06-22 20:01:58] Starting ATLAS job with PandaID=6239968087
[2024-06-22 20:01:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 20:06:27]  *** The last 200 lines of the pilot log: ***
[2024-06-22 20:06:27] 2024-06-22 18:06:10,363 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239968087/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | INFO     | extracted standard info from prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | found no stored workdir sizes
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | WARNING  | wrong length of table data, x=[1719079378.0], y=[710.0] (must be same and length>=4)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | ..............................
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . Timing measurements:
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . get job = 4 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . initial setup = 21 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . payload setup = 5 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . stage-in = 0 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . payload execution = 17 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . stage-out = 27 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . log creation = 18 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | ..............................
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239968087/pilotlog.txt
[2024-06-22 20:06:27] 2024-06-22 18:06:10,383 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 20:06:27] - Log from pilotlog.txt -
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | INFO     | extracted standard info from prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | found no stored workdir sizes
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | WARNING  | wrong length of table data, x=[1719079378.0], y=[710.0] (must be same and length>=4)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | ..............................
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . Timing measurements:
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . get job = 4 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . initial setup = 21 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . payload setup = 5 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . stage-in = 0 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . payload execution = 17 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . stage-out = 27 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . log creation = 18 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | ..............................
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239968087/pilotlog.txt
[2024-06-22 20:06:27] 2024-06-22 18:06:10,383 | WARNING  | 
[2024-06-22 20:06:27] [begin log extracts]
[2024-06-22 20:06:27] - Log from pilotlog.txt -
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | INFO     | extracted standard info from prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,364 | WARNING  | GPU info not found in prmon json
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | WARNING  | found no stored workdir sizes
[2024-06-22 20:06:27] 2024-06-22 18:06:10,365 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | WARNING  | wrong length of table data, x=[1719079378.0], y=[710.0] (must be same and length>=4)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | ..............................
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . Timing measurements:
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . get job = 4 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . initial setup = 21 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,366 | INFO     | . payload setup = 5 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . stage-in = 0 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . payload execution = 17 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . stage-out = 27 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | . log creation = 18 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | ..............................
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 20:06:27] 2024-06-22 18:06:10,367 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239968087/pilotlog.txt
[2024-06-22 20:06:27] [end log extracts]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,383 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,384 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 20:03:06,114 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 20:06:27] 2024-06-22 18:06:10,500 | INFO     | 
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | job summary report
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | --------------------------------------------------
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | PanDA job id: 6239968087
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | task id: 38921013
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 20:03:06,114 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | pilot state: failed 
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | transexitcode: 65
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | exeerrorcode: 65
[2024-06-22 20:06:27] 2024-06-22 18:06:10,501 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | exitcode: 65
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | cpuconsumptiontime: 22 s
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | nevents: 0
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | neventsw: 0
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | pid: 2183851
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | pgrp: 2183851
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | corecount: 4
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | event service: False
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | sizes: {0: 2386923, 1: 2387122, 5: 2387328, 12: 2387384, 51: 2391357, 79: 2415022, 81: 2415022, 202: 2415164}
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | --------------------------------------------------
[2024-06-22 20:06:27] 2024-06-22 18:06:10,502 | INFO     | 
[2024-06-22 20:06:27] 2024-06-22 18:06:10,503 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-06-22 20:06:27] 2024-06-22 18:06:10,523 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,523 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 20:06:27] 2024-06-22 18:06:10,525 | INFO     | job 6239968087 has completed (purged errors)
[2024-06-22 20:06:27] 2024-06-22 18:06:10,526 | INFO     | overall cleanup function is called
[2024-06-22 20:06:27] 2024-06-22 18:06:11,532 | INFO     | --- collectZombieJob: --- 10, [2183851]
[2024-06-22 20:06:27] 2024-06-22 18:06:11,532 | INFO     | zombie collector waiting for pid 2183851
[2024-06-22 20:06:27] 2024-06-22 18:06:11,532 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 20:06:27] 2024-06-22 18:06:12,537 | INFO     | collected zombie processes
[2024-06-22 20:06:27] 2024-06-22 18:06:12,537 | INFO     | will now attempt to kill all subprocesses of pid=2183851
[2024-06-22 20:06:27] 2024-06-22 18:06:12,733 | INFO     | process IDs to be killed: [2183851] (in reverse order)
[2024-06-22 20:06:27] 2024-06-22 18:06:12,864 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 20:06:27] 2024-06-22 18:06:12,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 20:06:27] 2024-06-22 18:06:12,880 | INFO     | did not find any defunct processes belonging to 2183851
[2024-06-22 20:06:27] 2024-06-22 18:06:12,892 | INFO     | did not find any defunct processes belonging to 2183851
[2024-06-22 20:06:27] 2024-06-22 18:06:12,893 | INFO     | ready for new job
[2024-06-22 20:06:27] 2024-06-22 18:06:12,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 20:06:27] 2024-06-22 18:06:12,894 | INFO     | *************************************
[2024-06-22 20:06:27] 2024-06-22 18:06:12,894 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 20:06:27] 2024-06-22 18:06:12,894 | INFO     | *************************************
[2024-06-22 20:06:27] 2024-06-22 18:06:12,894 | INFO     | 
[2024-06-22 20:06:27] 2024-06-22 18:06:12,904 | INFO     | architecture information:
[2024-06-22 20:06:27] 2024-06-22 18:06:12,904 | INFO     | executing command: cat /etc/os-release
[2024-06-22 20:06:27] 2024-06-22 18:06:12,920 | INFO     | cat /etc/os-release:
[2024-06-22 20:06:27] NAME="CentOS Linux"
[2024-06-22 20:06:27] VERSION="7 (Core)"
[2024-06-22 20:06:27] ID="centos"
[2024-06-22 20:06:27] ID_LIKE="rhel fedora"
[2024-06-22 20:06:27] VERSION_ID="7"
[2024-06-22 20:06:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 20:06:27] ANSI_COLOR="0;31"
[2024-06-22 20:06:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 20:06:27] HOME_URL="https://www.centos.org/"
[2024-06-22 20:06:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 20:06:27] 
[2024-06-22 20:06:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 20:06:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 20:06:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 20:06:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 20:06:27] 
[2024-06-22 20:06:27] 2024-06-22 18:06:12,920 | INFO     | *************************************
[2024-06-22 20:06:27] 2024-06-22 18:06:13,424 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-06-22 20:06:27] 2024-06-22 18:06:13,441 | INFO     | sufficient remaining disk space (3164716662784 B)
[2024-06-22 20:06:27] 2024-06-22 18:06:13,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 20:06:27] 2024-06-22 18:06:13,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 20:06:27] 2024-06-22 18:06:13,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 20:06:27] 2024-06-22 18:06:13,443 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 20:06:27] 2024-06-22 18:06:13,443 | INFO     | aborting loop
[2024-06-22 20:06:27] 2024-06-22 18:06:13,444 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 20:06:27] 2024-06-22 18:06:13,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 20:06:27] 2024-06-22 18:06:13,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 20:06:27] 2024-06-22 18:06:13,734 | INFO     | all data control threads have been joined
[2024-06-22 20:06:27] 2024-06-22 18:06:14,383 | INFO     | all job control threads have been joined
[2024-06-22 20:06:27] 2024-06-22 18:06:14,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 20:06:27] 2024-06-22 18:06:14,447 | INFO     | [job] retrieve thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:14,449 | INFO     | [job] job monitor thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:14,523 | INFO     | [data] copytool_in thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:14,563 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:14,625 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:14,739 | INFO     | [data] control thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:14,745 | INFO     | all payload control threads have been joined
[2024-06-22 20:06:27] 2024-06-22 18:06:14,755 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:15,097 | INFO     | [payload] failed_post thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:15,361 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:15,389 | INFO     | [job] control thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:15,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 20:06:27] 2024-06-22 18:06:15,751 | INFO     | [payload] control thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:15,794 | INFO     | [job] validate thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:15,993 | INFO     | [payload] validate_post thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:16,407 | INFO     | [data] copytool_out thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:16,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 20:06:27] 2024-06-22 18:06:16,516 | INFO     | [job] queue monitor thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:20,501 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 20:06:27] 2024-06-22 18:06:21,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47970397119552)>', '<ExcThread(monitor, started 47970592753408)>']
[2024-06-22 20:06:27] 2024-06-22 18:06:22,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 20:06:27] 2024-06-22 18:06:22,491 | INFO     | [monitor] control thread has ended
[2024-06-22 20:06:27] 2024-06-22 18:06:26,572 | INFO     | all workflow threads have been joined
[2024-06-22 20:06:27] 2024-06-22 18:06:26,572 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 20:06:27] 2024-06-22 18:06:26,573 | INFO     | traces error code: 0
[2024-06-22 20:06:27] 2024-06-22 18:06:26,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 20:06:27] 2024-06-22 18:06:26,685 [wrapper] ==== pilot stdout END ====
[2024-06-22 20:06:27] 2024-06-22 18:06:26,688 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 20:06:27] 2024-06-22 18:06:26,691 [wrapper] pilotpid: 2138578
[2024-06-22 20:06:27] 2024-06-22 18:06:26,693 [wrapper] Pilot exit status: 0
[2024-06-22 20:06:27] 2024-06-22 18:06:26,700 [wrapper] pandaids: 6239968087
[2024-06-22 20:06:27] 2024-06-22 18:06:26,807 [wrapper] cleanup supervisor_pilot 2138583 2138579
[2024-06-22 20:06:27] 2024-06-22 18:06:26,810 [wrapper] Test setup, not cleaning
[2024-06-22 20:06:27] 2024-06-22 18:06:26,812 [wrapper] ==== wrapper stdout END ====
[2024-06-22 20:06:27] 2024-06-22 18:06:26,815 [wrapper] ==== wrapper stderr END ====
[2024-06-22 20:06:27] 2024-06-22 18:06:26,820 [wrapper] apfmon messages muted
[2024-06-22 20:06:27]  *** Error codes and diagnostics ***
[2024-06-22 20:06:27]     "exeErrorCode": 65,
[2024-06-22 20:06:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 20:06:27]     "pilotErrorCode": 1305,
[2024-06-22 20:06:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 20:03:06,114 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 20:06:27]  *** Listing of results directory ***
[2024-06-22 20:06:27] total 531048
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc    469766 Jun 21 19:14 pilot3.tar.gz
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc      5654 Jun 21 19:36 queuedata.json
[2024-06-22 20:06:27] -rwx------ 1 boinc boinc     32308 Jun 21 19:37 runpilot2-wrapper.sh
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc       100 Jun 22 19:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 20:06:27] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 19:08 run_atlas
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc       105 Jun 22 19:08 job.xml
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc      6644 Jun 22 20:01 init_data.xml
[2024-06-22 20:06:27] -rw-r--r-- 2 boinc boinc 541085055 Jun 22 20:01 EVNT.38776210._000544.pool.root.1
[2024-06-22 20:06:27] -rw-r--r-- 2 boinc boinc     17537 Jun 22 20:01 start_atlas.sh
[2024-06-22 20:06:27] drwxrwx--x 2 boinc boinc      4096 Jun 22 20:01 shared
[2024-06-22 20:06:27] -rw-r--r-- 2 boinc boinc    482539 Jun 22 20:01 input.tar.gz
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc         0 Jun 22 20:01 boinc_lockfile
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc      2646 Jun 22 20:01 pandaJob.out
[2024-06-22 20:06:27] -rw------- 1 boinc boinc       424 Jun 22 20:01 setup.sh.local
[2024-06-22 20:06:27] -rw------- 1 boinc boinc         0 Jun 22 20:02 agis_schedconf.agis.BOINC_MCORE.json
[2024-06-22 20:06:27] -rw------- 1 boinc boinc         0 Jun 22 20:02 agis_ddmendpoints.agis.ALL.json
[2024-06-22 20:06:27] -rw------- 1 boinc boinc   1321363 Jun 22 20:02 cric_ddmendpoints.json
[2024-06-22 20:06:27] -rw------- 1 boinc boinc         0 Jun 22 20:02 agis_schedconf.cvmfs.json
[2024-06-22 20:06:27] drwx------ 4 boinc boinc      4096 Jun 22 20:02 pilot3
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc       523 Jun 22 20:03 boinc_task_state.xml
[2024-06-22 20:06:27] -rw------- 1 boinc boinc       954 Jun 22 20:03 memory_monitor_summary.json
[2024-06-22 20:06:27] -rw------- 1 boinc boinc     19891 Jun 22 20:03 log.38921013._052113.job.log.tgz.1
[2024-06-22 20:06:27] -rw------- 1 boinc boinc        95 Jun 22 20:06 pilot_heartbeat.json
[2024-06-22 20:06:27] -rw------- 1 boinc boinc      8325 Jun 22 20:06 heartbeat.json
[2024-06-22 20:06:27] -rw------- 1 boinc boinc      4346 Jun 22 20:06 pilotlog.txt
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc      8192 Jun 22 20:06 boinc_mmap_file
[2024-06-22 20:06:27] -rw------- 1 boinc boinc     81008 Jun 22 20:06 log.38921013._052113.job.log.1
[2024-06-22 20:06:27] -rw------- 1 boinc boinc       188 Jun 22 20:06 output.list
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc       620 Jun 22 20:06 runtime_log
[2024-06-22 20:06:27] -rw------- 1 boinc boinc    122880 Jun 22 20:06 result.tar.gz
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc     11275 Jun 22 20:06 runtime_log.err
[2024-06-22 20:06:27] -rw------- 1 boinc boinc       635 Jun 22 20:06 9ShNDmWNxe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmXymKDmjapVRn.diag
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc        22 Jun 22 20:06 wrapper_checkpoint.txt
[2024-06-22 20:06:27] -rw-r--r-- 1 boinc boinc     21420 Jun 22 20:06 stderr.txt
[2024-06-22 20:06:27] No HITS result produced
[2024-06-22 20:06:27]  *** Contents of shared directory: ***
[2024-06-22 20:06:27] total 529020
[2024-06-22 20:06:27] -rw-r--r-- 2 boinc boinc 541085055 Jun 22 20:01 ATLAS.root_0
[2024-06-22 20:06:27] -rw-r--r-- 2 boinc boinc     17537 Jun 22 20:01 start_atlas.sh
[2024-06-22 20:06:27] -rw-r--r-- 2 boinc boinc    482539 Jun 22 20:01 input.tar.gz
[2024-06-22 20:06:27] -rw------- 1 boinc boinc    122880 Jun 22 20:06 result.tar.gz
20:06:28 (2133980): run_atlas exited; CPU time 21.569622
20:06:28 (2133980): called boinc_finish(0)

</stderr_txt>
]]>


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