Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:01:49 (1170460): wrapper (7.7.26015): starting
19:01:49 (1170460): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 19:01:49] Arguments: --nthreads 4
[2024-06-22 19:01:49] Threads: 4
[2024-06-22 19:01:49] Checking for CVMFS
[2024-06-22 19:01:49] No cvmfs_config command found, will try listing directly
[2024-06-22 19:01:49] CVMFS is ok
[2024-06-22 19:01:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 19:01:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 19:01:49] Further information can be found at the LHC@home message board.
[2024-06-22 19:01:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 19:01:49] Checking for apptainer binary...
[2024-06-22 19:01:49] which: no apptainer in ((null))
[2024-06-22 19:01:49] apptainer is not installed, using version from CVMFS
[2024-06-22 19:01:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 19:01:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-22 19:01:50] apptainer works
[2024-06-22 19:01:50] Set ATHENA_PROC_NUMBER=4
[2024-06-22 19:01:50] Set ATHENA_CORE_NUMBER=4
[2024-06-22 19:01:50] Starting ATLAS job with PandaID=6239951295
[2024-06-22 19:01:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 19:08:01]  *** The last 200 lines of the pilot log: ***
[2024-06-22 19:08:01] 2024-06-22 17:07:44,966 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 19:08:01] 2024-06-22 17:07:44,966 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239951295/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 19:08:01] 2024-06-22 17:07:44,967 | INFO     | extracted standard info from prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,967 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | GPU info not found in prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | found no stored workdir sizes
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | WARNING  | wrong length of table data, x=[1719075746.0], y=[1216.0] (must be same and length>=4)
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | ..............................
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . Timing measurements:
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . get job = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . initial setup = 3 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . payload setup = 5 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . stage-in = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . payload execution = 16 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . stage-out = 1 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . log creation = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | ..............................
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239951295/pilotlog.txt
[2024-06-22 19:08:01] 2024-06-22 17:07:44,985 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 19:08:01] - Log from pilotlog.txt -
[2024-06-22 19:08:01] 2024-06-22 17:07:44,967 | INFO     | extracted standard info from prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,967 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | GPU info not found in prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | found no stored workdir sizes
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | WARNING  | wrong length of table data, x=[1719075746.0], y=[1216.0] (must be same and length>=4)
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | ..............................
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . Timing measurements:
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . get job = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . initial setup = 3 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . payload setup = 5 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . stage-in = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . payload execution = 16 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . stage-out = 1 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . log creation = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | ..............................
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239951295/pilotlog.txt
[2024-06-22 19:08:01] 2024-06-22 17:07:44,985 | WARNING  | 
[2024-06-22 19:08:01] [begin log extracts]
[2024-06-22 19:08:01] - Log from pilotlog.txt -
[2024-06-22 19:08:01] 2024-06-22 17:07:44,967 | INFO     | extracted standard info from prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,967 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | GPU info not found in prmon json
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | WARNING  | found no stored workdir sizes
[2024-06-22 19:08:01] 2024-06-22 17:07:44,968 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | WARNING  | wrong length of table data, x=[1719075746.0], y=[1216.0] (must be same and length>=4)
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | ..............................
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . Timing measurements:
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . get job = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . initial setup = 3 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . payload setup = 5 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . stage-in = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . payload execution = 16 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . stage-out = 1 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,969 | INFO     | . log creation = 0 s
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | ..............................
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 19:08:01] 2024-06-22 17:07:44,970 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6239951295/pilotlog.txt
[2024-06-22 19:08:01] [end log extracts]
[2024-06-22 19:08:01] 2024-06-22 17:07:44,985 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 19:08:01] 2024-06-22 17:07:44,985 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 19:02:33,501 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 19:08:01] 2024-06-22 17:07:45,082 | INFO     | 
[2024-06-22 19:08:01] 2024-06-22 17:07:45,082 | INFO     | job summary report
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | --------------------------------------------------
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | PanDA job id: 6239951295
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | task id: 38920995
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 19:02:33,501 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | pilot state: failed 
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | transexitcode: 65
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | exeerrorcode: 65
[2024-06-22 19:08:01] 2024-06-22 17:07:45,083 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | exitcode: 65
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | cpuconsumptiontime: 20 s
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | nevents: 0
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | neventsw: 0
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | pid: 1202210
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | pgrp: 1202210
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | corecount: 4
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | event service: False
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | sizes: {0: 2387053, 4: 2387259, 11: 2387287, 43: 2410468, 44: 2414733, 45: 2414889, 328: 2415003}
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | --------------------------------------------------
[2024-06-22 19:08:01] 2024-06-22 17:07:45,084 | INFO     | 
[2024-06-22 19:08:01] 2024-06-22 17:07:45,085 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,104 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | job 6239951295 has completed (purged errors)
[2024-06-22 19:08:01] 2024-06-22 17:07:45,105 | INFO     | overall cleanup function is called
[2024-06-22 19:08:01] 2024-06-22 17:07:46,111 | INFO     | --- collectZombieJob: --- 10, [1202210]
[2024-06-22 19:08:01] 2024-06-22 17:07:46,112 | INFO     | zombie collector waiting for pid 1202210
[2024-06-22 19:08:01] 2024-06-22 17:07:46,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 19:08:01] 2024-06-22 17:07:47,117 | INFO     | collected zombie processes
[2024-06-22 19:08:01] 2024-06-22 17:07:47,117 | INFO     | will now attempt to kill all subprocesses of pid=1202210
[2024-06-22 19:08:01] 2024-06-22 17:07:47,317 | INFO     | process IDs to be killed: [1202210] (in reverse order)
[2024-06-22 19:08:01] 2024-06-22 17:07:47,401 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 19:08:01] 2024-06-22 17:07:47,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 19:08:01] 2024-06-22 17:07:47,410 | INFO     | did not find any defunct processes belonging to 1202210
[2024-06-22 19:08:01] 2024-06-22 17:07:47,415 | INFO     | did not find any defunct processes belonging to 1202210
[2024-06-22 19:08:01] 2024-06-22 17:07:47,415 | INFO     | ready for new job
[2024-06-22 19:08:01] 2024-06-22 17:07:47,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 19:08:01] 2024-06-22 17:07:47,416 | INFO     | *************************************
[2024-06-22 19:08:01] 2024-06-22 17:07:47,416 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 19:08:01] 2024-06-22 17:07:47,416 | INFO     | *************************************
[2024-06-22 19:08:01] 2024-06-22 17:07:47,416 | INFO     | 
[2024-06-22 19:08:01] 2024-06-22 17:07:47,420 | INFO     | architecture information:
[2024-06-22 19:08:01] 2024-06-22 17:07:47,420 | INFO     | executing command: cat /etc/os-release
[2024-06-22 19:08:01] 2024-06-22 17:07:47,432 | INFO     | cat /etc/os-release:
[2024-06-22 19:08:01] NAME="CentOS Linux"
[2024-06-22 19:08:01] VERSION="7 (Core)"
[2024-06-22 19:08:01] ID="centos"
[2024-06-22 19:08:01] ID_LIKE="rhel fedora"
[2024-06-22 19:08:01] VERSION_ID="7"
[2024-06-22 19:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 19:08:01] ANSI_COLOR="0;31"
[2024-06-22 19:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 19:08:01] HOME_URL="https://www.centos.org/"
[2024-06-22 19:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 19:08:01] 
[2024-06-22 19:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 19:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 19:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 19:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 19:08:01] 
[2024-06-22 19:08:01] 2024-06-22 17:07:47,432 | INFO     | *************************************
[2024-06-22 19:08:01] 2024-06-22 17:07:47,935 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2024-06-22 19:08:01] 2024-06-22 17:07:47,949 | INFO     | sufficient remaining disk space (3154867388416 B)
[2024-06-22 19:08:01] 2024-06-22 17:07:47,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 19:08:01] 2024-06-22 17:07:47,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 19:08:01] 2024-06-22 17:07:47,950 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:08:01] 2024-06-22 17:07:47,950 | INFO     | aborting loop
[2024-06-22 19:08:01] 2024-06-22 17:07:48,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 19:08:01] 2024-06-22 17:07:48,094 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 19:08:01] 2024-06-22 17:07:48,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 19:08:01] 2024-06-22 17:07:48,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 19:08:01] 2024-06-22 17:07:48,751 | INFO     | all payload control threads have been joined
[2024-06-22 19:08:01] 2024-06-22 17:07:48,790 | INFO     | all data control threads have been joined
[2024-06-22 19:08:01] 2024-06-22 17:07:48,955 | INFO     | [job] retrieve thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:48,956 | INFO     | [job] job monitor thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,112 | INFO     | all job control threads have been joined
[2024-06-22 19:08:01] 2024-06-22 17:07:49,652 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,737 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,741 | INFO     | [payload] validate_post thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,754 | INFO     | [job] validate thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,757 | INFO     | [payload] control thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,796 | INFO     | [data] control thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:49,825 | INFO     | [data] copytool_in thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:50,006 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:50,053 | INFO     | [data] copytool_out thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:50,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 19:08:01] 2024-06-22 17:07:50,118 | INFO     | [job] control thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:50,162 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:50,340 | INFO     | [payload] failed_post thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:51,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 19:08:01] 2024-06-22 17:07:51,098 | INFO     | [job] queue monitor thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:55,039 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 19:08:01] 2024-06-22 17:07:55,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47468332479552)>', '<ExcThread(monitor, started 47468528113408)>']
[2024-06-22 19:08:01] 2024-06-22 17:07:56,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 19:08:01] 2024-06-22 17:07:56,135 | INFO     | [monitor] control thread has ended
[2024-06-22 19:08:01] 2024-06-22 17:08:00,724 | INFO     | all workflow threads have been joined
[2024-06-22 19:08:01] 2024-06-22 17:08:00,724 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 19:08:01] 2024-06-22 17:08:00,725 | INFO     | traces error code: 0
[2024-06-22 19:08:01] 2024-06-22 17:08:00,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 19:08:01] 2024-06-22 17:08:00,827 [wrapper] ==== pilot stdout END ====
[2024-06-22 19:08:01] 2024-06-22 17:08:00,830 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 19:08:01] 2024-06-22 17:08:00,832 [wrapper] pilotpid: 1175681
[2024-06-22 19:08:01] 2024-06-22 17:08:00,834 [wrapper] Pilot exit status: 0
[2024-06-22 19:08:01] 2024-06-22 17:08:00,841 [wrapper] pandaids: 6239951295
[2024-06-22 19:08:01] 2024-06-22 17:08:00,941 [wrapper] cleanup supervisor_pilot 1175690 1175682
[2024-06-22 19:08:01] 2024-06-22 17:08:00,943 [wrapper] Test setup, not cleaning
[2024-06-22 19:08:01] 2024-06-22 17:08:00,945 [wrapper] ==== wrapper stdout END ====
[2024-06-22 19:08:01] 2024-06-22 17:08:00,948 [wrapper] ==== wrapper stderr END ====
[2024-06-22 19:08:01] 2024-06-22 17:08:00,952 [wrapper] apfmon messages muted
[2024-06-22 19:08:01]  *** Error codes and diagnostics ***
[2024-06-22 19:08:01]     "exeErrorCode": 65,
[2024-06-22 19:08:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 19:08:01]     "pilotErrorCode": 1305,
[2024-06-22 19:08:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 19:02:33,501 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 19:08:01]  *** Listing of results directory ***
[2024-06-22 19:08:01] total 622108
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc    469766 Jun 21 19:14 pilot3.tar.gz
[2024-06-22 19:08:01] -rwx------ 1 boinc boinc     32308 Jun 21 19:26 runpilot2-wrapper.sh
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc      5654 Jun 21 19:26 queuedata.json
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc       100 Jun 22 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 19:08:01] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 18:01 run_atlas
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc       105 Jun 22 18:01 job.xml
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc      6644 Jun 22 19:01 init_data.xml
[2024-06-22 19:08:01] -rw-r--r-- 2 boinc boinc 634321179 Jun 22 19:01 EVNT.38776180._000978.pool.root.1
[2024-06-22 19:08:01] -rw-r--r-- 2 boinc boinc     17537 Jun 22 19:01 start_atlas.sh
[2024-06-22 19:08:01] drwxrwx--x 2 boinc boinc      4096 Jun 22 19:01 shared
[2024-06-22 19:08:01] -rw-r--r-- 2 boinc boinc    482511 Jun 22 19:01 input.tar.gz
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc         0 Jun 22 19:01 boinc_lockfile
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc      2613 Jun 22 19:01 pandaJob.out
[2024-06-22 19:08:01] -rw------- 1 boinc boinc       424 Jun 22 19:01 setup.sh.local
[2024-06-22 19:08:01] -rw------- 1 boinc boinc         0 Jun 22 19:02 agis_schedconf.cvmfs.json
[2024-06-22 19:08:01] -rw------- 1 boinc boinc         0 Jun 22 19:02 agis_schedconf.agis.BOINC_MCORE.json
[2024-06-22 19:08:01] -rw------- 1 boinc boinc         0 Jun 22 19:02 agis_ddmendpoints.agis.ALL.json
[2024-06-22 19:08:01] -rw------- 1 boinc boinc   1321363 Jun 22 19:02 cric_ddmendpoints.json
[2024-06-22 19:08:01] drwx------ 4 boinc boinc      4096 Jun 22 19:02 pilot3
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc       523 Jun 22 19:02 boinc_task_state.xml
[2024-06-22 19:08:01] -rw------- 1 boinc boinc       982 Jun 22 19:02 memory_monitor_summary.json
[2024-06-22 19:08:01] -rw------- 1 boinc boinc     19936 Jun 22 19:03 log.38920995._057612.job.log.tgz.1
[2024-06-22 19:08:01] -rw------- 1 boinc boinc        96 Jun 22 19:07 pilot_heartbeat.json
[2024-06-22 19:08:01] -rw------- 1 boinc boinc      8372 Jun 22 19:07 heartbeat.json
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc      8192 Jun 22 19:07 boinc_mmap_file
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc        22 Jun 22 19:07 wrapper_checkpoint.txt
[2024-06-22 19:08:01] -rw------- 1 boinc boinc      4223 Jun 22 19:08 pilotlog.txt
[2024-06-22 19:08:01] -rw------- 1 boinc boinc     86805 Jun 22 19:08 log.38920995._057612.job.log.1
[2024-06-22 19:08:01] -rw------- 1 boinc boinc       188 Jun 22 19:08 output.list
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc       620 Jun 22 19:08 runtime_log
[2024-06-22 19:08:01] -rw------- 1 boinc boinc    122880 Jun 22 19:08 result.tar.gz
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc     11275 Jun 22 19:08 runtime_log.err
[2024-06-22 19:08:01] -rw------- 1 boinc boinc       635 Jun 22 19:08 QnLODmhCxe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmJNrKDmw2STmm.diag
[2024-06-22 19:08:01] -rw-r--r-- 1 boinc boinc     21352 Jun 22 19:08 stderr.txt
[2024-06-22 19:08:01] No HITS result produced
[2024-06-22 19:08:01]  *** Contents of shared directory: ***
[2024-06-22 19:08:01] total 620072
[2024-06-22 19:08:01] -rw-r--r-- 2 boinc boinc 634321179 Jun 22 19:01 ATLAS.root_0
[2024-06-22 19:08:01] -rw-r--r-- 2 boinc boinc     17537 Jun 22 19:01 start_atlas.sh
[2024-06-22 19:08:01] -rw-r--r-- 2 boinc boinc    482511 Jun 22 19:01 input.tar.gz
[2024-06-22 19:08:01] -rw------- 1 boinc boinc    122880 Jun 22 19:08 result.tar.gz
19:08:02 (1170460): run_atlas exited; CPU time 20.975031
19:08:02 (1170460): called boinc_finish(0)

</stderr_txt>
]]>

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