Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:47:01 (3948376): wrapper (7.7.26015): starting
11:47:01 (3948376): wrapper: running run_atlas (--nthreads 6)
[2024-06-23 11:47:01] Arguments: --nthreads 6
[2024-06-23 11:47:01] Threads: 6
[2024-06-23 11:47:01] Checking for CVMFS
[2024-06-23 11:47:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 11:47:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 11:47:01] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 11:47:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 11:47:02] 2.11.2.0 1957927 5247 62340 134197 3 56 4831756 6144001 915 130560 0 8657573 99.995 786981 6722 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-23 11:47:02] CVMFS is ok
[2024-06-23 11:47:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 11:47:02] Checking for apptainer binary...
[2024-06-23 11:47:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 11:47:02] Running /usr/bin/apptainer --version
[2024-06-23 11:47:02] apptainer version 1.3.0
[2024-06-23 11:47:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 11:47:02] Ryzen8
[2024-06-23 11:47:02] apptainer works
[2024-06-23 11:47:02] Set ATHENA_PROC_NUMBER=6
[2024-06-23 11:47:02] Set ATHENA_CORE_NUMBER=6
[2024-06-23 11:47:02] Starting ATLAS job with PandaID=6239866224
[2024-06-23 11:47:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 15:26:37]  *** The last 200 lines of the pilot log: ***
[2024-06-23 15:26:37] 2024-06-23 13:26:16,334 | INFO     | fitting pss+swap vs Time
[2024-06-23 15:26:37] 2024-06-23 13:26:16,334 | INFO     | model: linear, x: [1719136046.0, 1719136107.0, 1719136168.0, 1719136229.0, 1719136290.0, 1719136351.0, 1719136412.0, 1719136473.0, 1719136534.0, 1719136595.0, 1719
[2024-06-23 15:26:37] 2024-06-23 13:26:16,334 | INFO     | sum of square deviations: 3124858590.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,334 | INFO     | sum of deviations: 14435444277.500008
[2024-06-23 15:26:37] 2024-06-23 13:26:16,334 | INFO     | mean x: 1719142603.5
[2024-06-23 15:26:37] 2024-06-23 13:26:16,335 | INFO     | mean y: 2482278.337962963
[2024-06-23 15:26:37] 2024-06-23 13:26:16,335 | INFO     | -- intersect: -7939185014.165196
[2024-06-23 15:26:37] 2024-06-23 13:26:16,335 | INFO     | intersect: -7939185014.165196
[2024-06-23 15:26:37] 2024-06-23 13:26:16,335 | INFO     | chi2: 2.5838575619139994
[2024-06-23 15:26:37] 2024-06-23 13:26:16,335 | INFO     | model: linear, x: [1719136046.0, 1719136107.0, 1719136168.0, 1719136229.0, 1719136290.0, 1719136351.0, 1719136412.0, 1719136473.0, 1719136534.0, 1719136595.0, 1719
[2024-06-23 15:26:37] 2024-06-23 13:26:16,335 | INFO     | sum of square deviations: 2912836010.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | sum of deviations: 27256739800.000004
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | mean x: 1719142451.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | mean y: 2491320.1990521327
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | -- intersect: -16084311474.456474
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | intersect: -16084311474.456474
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | chi2: 1.9219767011209306
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | current chi2=1.9219767011209306 (change=25.61599642910575 %)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | model: linear, x: [1719136046.0, 1719136107.0, 1719136168.0, 1719136229.0, 1719136290.0, 1719136351.0, 1719136412.0, 1719136473.0, 1719136534.0, 1719136595.0, 1719
[2024-06-23 15:26:37] 2024-06-23 13:26:16,336 | INFO     | sum of square deviations: 2710627567.5
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | sum of deviations: 26595730928.999996
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | mean x: 1719142298.5
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | mean y: 2490821.7378640776
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | -- intersect: -16865132952.094576
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | intersect: -16865132952.094576
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | chi2: 1.9234965317764423
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | current chi2=1.9234965317764423 (change=-0.07907643493416772 %)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | right removable region: 205
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | model: linear, x: [1719136351.0, 1719136412.0, 1719136473.0, 1719136534.0, 1719136595.0, 1719136656.0, 1719136717.0, 1719136778.0, 1719136839.0, 1719136900.0, 1719
[2024-06-23 15:26:37] 2024-06-23 13:26:16,337 | INFO     | sum of square deviations: 2912836010.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | sum of deviations: -26986265129.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | mean x: 1719142756.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | mean y: 2511883.4265402844
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | -- intersect: 15929684593.714394
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | intersect: 15929684593.714394
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | chi2: 0.853651998598034
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | current chi2=0.853651998598034 (change=66.96211079198619 %)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | model: linear, x: [1719136656.0, 1719136717.0, 1719136778.0, 1719136839.0, 1719136900.0, 1719136961.0, 1719137022.0, 1719137083.0, 1719137144.0, 1719137205.0, 1719
[2024-06-23 15:26:37] 2024-06-23 13:26:16,338 | INFO     | sum of square deviations: 2710627567.5
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | sum of deviations: -22410173472.999996
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | mean x: 1719142908.5
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | mean y: 2508400.2524271845
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | -- intersect: 14215560486.893528
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | intersect: 14215560486.893528
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | chi2: 0.8369104179651056
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | current chi2=0.8369104179651056 (change=1.9611716086207691 %)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | left removable region: 20
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | model: linear, x: [1719137266.0, 1719137327.0, 1719137388.0, 1719137449.0, 1719137510.0, 1719137571.0, 1719137632.0, 1719137693.0, 1719137754.0, 1719137815.0, 1719
[2024-06-23 15:26:37] 2024-06-23 13:26:16,339 | INFO     | sum of square deviations: 1963274020.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | sum of deviations: 7753671142.999994
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | mean x: 1719142878.0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | mean y: 2503502.762162162
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | -- intersect: -6787006462.760919
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | intersect: -6787006462.760919
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | chi2: 0.00477425161380729
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | -- intersect: -6787006462.760919
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | current memory leak: 3.95 B/s (using 185 data points, chi2=0.00)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | ..............................
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . Timing measurements:
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . get job = 0 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . initial setup = 1 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . payload setup = 2 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . stage-in = 0 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . payload execution = 13124 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . stage-out = 0 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | . log creation = 0 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,340 | INFO     | ..............................
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | 
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | job summary report
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | --------------------------------------------------
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | PanDA job id: 6239866224
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | task id: 38921013
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | errors: (none)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | pilot state: finished 
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | transexitcode: 0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | exeerrorcode: 0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | exeerrordiag: 
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | exitcode: 0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | exitmsg: OK
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | cpuconsumptiontime: 75373 s
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | nevents: 400
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | neventsw: 0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | pid: 3959036
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | pgrp: 3959036
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | corecount: 6
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | event service: False
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | sizes: {0: 2387031, 2: 2387237, 11: 2387265, 13131: 2417394, 13132: 2417393, 13133: 2426593, 13136: 2426707}
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | --------------------------------------------------
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | 
[2024-06-23 15:26:37] 2024-06-23 13:26:16,386 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,399 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,399 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 15:26:37] 2024-06-23 13:26:16,399 | INFO     | job 6239866224 has completed (purged errors)
[2024-06-23 15:26:37] 2024-06-23 13:26:16,399 | INFO     | overall cleanup function is called
[2024-06-23 15:26:37] 2024-06-23 13:26:17,403 | INFO     | --- collectZombieJob: --- 10, [3959036]
[2024-06-23 15:26:37] 2024-06-23 13:26:17,403 | INFO     | zombie collector waiting for pid 3959036
[2024-06-23 15:26:37] 2024-06-23 13:26:17,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 15:26:37] 2024-06-23 13:26:17,585 | WARNING  | process 3959036 is no longer using CPU - aborting
[2024-06-23 15:26:37] 2024-06-23 13:26:17,585 | INFO     | aborting job monitoring since job object (job id=6239866224) has expired
[2024-06-23 15:26:37] 2024-06-23 13:26:18,408 | INFO     | collected zombie processes
[2024-06-23 15:26:37] 2024-06-23 13:26:18,409 | INFO     | will now attempt to kill all subprocesses of pid=3959036
[2024-06-23 15:26:37] 2024-06-23 13:26:18,446 | INFO     | process IDs to be killed: [3959036] (in reverse order)
[2024-06-23 15:26:37] 2024-06-23 13:26:18,472 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 15:26:37] 2024-06-23 13:26:18,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 15:26:37] 2024-06-23 13:26:18,474 | INFO     | did not find any defunct processes belonging to 3959036
[2024-06-23 15:26:37] 2024-06-23 13:26:18,476 | INFO     | did not find any defunct processes belonging to 3959036
[2024-06-23 15:26:37] 2024-06-23 13:26:18,476 | INFO     | ready for new job
[2024-06-23 15:26:37] 2024-06-23 13:26:18,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 15:26:37] 2024-06-23 13:26:18,477 | INFO     | *************************************
[2024-06-23 15:26:37] 2024-06-23 13:26:18,477 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 15:26:37] 2024-06-23 13:26:18,477 | INFO     | *************************************
[2024-06-23 15:26:37] 2024-06-23 13:26:18,477 | INFO     | 
[2024-06-23 15:26:37] 2024-06-23 13:26:18,477 | INFO     | architecture information:
[2024-06-23 15:26:37] 2024-06-23 13:26:18,478 | INFO     | executing command: cat /etc/os-release
[2024-06-23 15:26:37] 2024-06-23 13:26:18,486 | INFO     | cat /etc/os-release:
[2024-06-23 15:26:37] NAME="CentOS Linux"
[2024-06-23 15:26:37] VERSION="7 (Core)"
[2024-06-23 15:26:37] ID="centos"
[2024-06-23 15:26:37] ID_LIKE="rhel fedora"
[2024-06-23 15:26:37] VERSION_ID="7"
[2024-06-23 15:26:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 15:26:37] ANSI_COLOR="0;31"
[2024-06-23 15:26:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 15:26:37] HOME_URL="https://www.centos.org/"
[2024-06-23 15:26:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 15:26:37] 
[2024-06-23 15:26:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 15:26:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 15:26:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 15:26:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 15:26:37] 
[2024-06-23 15:26:37] 2024-06-23 13:26:18,486 | INFO     | *************************************
[2024-06-23 15:26:37] 2024-06-23 13:26:18,989 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | INFO     | sufficient remaining disk space (94809096192 B)
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 15:26:37] 2024-06-23 13:26:18,999 | INFO     | aborting loop
[2024-06-23 15:26:37] 2024-06-23 13:26:19,760 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 15:26:37] 2024-06-23 13:26:19,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 15:26:37] 2024-06-23 13:26:19,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 15:26:37] 2024-06-23 13:26:19,815 | INFO     | all data control threads have been joined
[2024-06-23 15:26:37] 2024-06-23 13:26:19,879 | INFO     | all job control threads have been joined
[2024-06-23 15:26:37] 2024-06-23 13:26:20,003 | INFO     | [job] retrieve thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:20,003 | INFO     | [job] job monitor thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:20,361 | INFO     | [payload] failed_post thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:20,397 | INFO     | all payload control threads have been joined
[2024-06-23 15:26:37] 2024-06-23 13:26:20,820 | INFO     | [data] control thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:20,881 | INFO     | [job] control thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:20,926 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,005 | INFO     | [data] copytool_out thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,020 | INFO     | [payload] validate_post thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,022 | INFO     | [job] validate thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,026 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 15:26:37] 2024-06-23 13:26:21,402 | INFO     | [payload] control thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,416 | INFO     | [data] copytool_in thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:21,480 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:22,398 | INFO     | [job] queue monitor thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:23,005 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:29,960 | INFO     | job.realtimelogging is not enabled
[2024-06-23 15:26:37] 2024-06-23 13:26:30,965 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 15:26:37] 2024-06-23 13:26:32,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649727817536)>', '<ExcThread(monitor, started 140649105979136)>']
[2024-06-23 15:26:37] 2024-06-23 13:26:33,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 15:26:37] 2024-06-23 13:26:33,820 | INFO     | [monitor] control thread has ended
[2024-06-23 15:26:37] 2024-06-23 13:26:37,883 | INFO     | all workflow threads have been joined
[2024-06-23 15:26:37] 2024-06-23 13:26:37,883 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 15:26:37] 2024-06-23 13:26:37,883 | INFO     | traces error code: 0
[2024-06-23 15:26:37] 2024-06-23 13:26:37,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 15:26:37] 2024-06-23 13:26:37,940 [wrapper] ==== pilot stdout END ====
[2024-06-23 15:26:37] 2024-06-23 13:26:37,941 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 15:26:37] 2024-06-23 13:26:37,942 [wrapper] pilotpid: 3952577
[2024-06-23 15:26:37] 2024-06-23 13:26:37,944 [wrapper] Pilot exit status: 0
[2024-06-23 15:26:37] 2024-06-23 13:26:37,948 [wrapper] pandaids: 6239866224
[2024-06-23 15:26:37] 2024-06-23 13:26:37,964 [wrapper] cleanup supervisor_pilot 4018498 3952578
[2024-06-23 15:26:37] 2024-06-23 13:26:37,965 [wrapper] Test setup, not cleaning
[2024-06-23 15:26:37] 2024-06-23 13:26:37,966 [wrapper] ==== wrapper stdout END ====
[2024-06-23 15:26:37] 2024-06-23 13:26:37,968 [wrapper] ==== wrapper stderr END ====
[2024-06-23 15:26:37] 2024-06-23 13:26:37,970 [wrapper] apfmon messages muted
[2024-06-23 15:26:37]  *** Error codes and diagnostics ***
[2024-06-23 15:26:37]     "exeErrorCode": 0,
[2024-06-23 15:26:37]     "exeErrorDiag": "",
[2024-06-23 15:26:37]     "pilotErrorCode": 0,
[2024-06-23 15:26:37]     "pilotErrorDiag": "",
[2024-06-23 15:26:37]  *** Listing of results directory ***
[2024-06-23 15:26:37] insgesamt 870028
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc    469766 21. Jun 18:12 pilot3.tar.gz
[2024-06-23 15:26:37] -rwx------ 1 boinc boinc     32308 21. Jun 18:15 runpilot2-wrapper.sh
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc      5654 21. Jun 18:15 queuedata.json
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc       100 23. Jun 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 15:26:37] -rwxr-xr-x 1 boinc boinc      7986 23. Jun 11:46 run_atlas
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc       105 23. Jun 11:46 job.xml
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc      7135 23. Jun 11:47 init_data.xml
[2024-06-23 15:26:37] -rw-r--r-- 2 boinc boinc 540338944 23. Jun 11:47 EVNT.38776210._000618.pool.root.1
[2024-06-23 15:26:37] -rw-r--r-- 2 boinc boinc     17537 23. Jun 11:47 start_atlas.sh
[2024-06-23 15:26:37] drwxrwx--x 2 boinc boinc      4096 23. Jun 11:47 shared
[2024-06-23 15:26:37] -rw-r--r-- 2 boinc boinc    482517 23. Jun 11:47 input.tar.gz
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc         0 23. Jun 11:47 boinc_lockfile
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc      2645 23. Jun 11:47 pandaJob.out
[2024-06-23 15:26:37] -rw------- 1 boinc boinc       461 23. Jun 11:47 setup.sh.local
[2024-06-23 15:26:37] -rw------- 1 boinc boinc   1025254 23. Jun 11:47 agis_schedconf.cvmfs.json
[2024-06-23 15:26:37] -rw------- 1 boinc boinc   1321363 23. Jun 11:47 cric_ddmendpoints.json
[2024-06-23 15:26:37] drwx------ 4 boinc boinc      4096 23. Jun 11:47 pilot3
[2024-06-23 15:26:37] -rw------- 1 boinc boinc        95 23. Jun 15:25 pilot_heartbeat.json
[2024-06-23 15:26:37] -rw------- 1 boinc boinc 343747431 23. Jun 15:25 HITS.38921013._052025.pool.root.1
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc       531 23. Jun 15:25 boinc_task_state.xml
[2024-06-23 15:26:37] -rw------- 1 boinc boinc      1021 23. Jun 15:26 memory_monitor_summary.json
[2024-06-23 15:26:37] -rw------- 1 boinc boinc         0 23. Jun 15:26 agis_ddmendpoints.agis.ALL.json
[2024-06-23 15:26:37] -rw------- 1 boinc boinc    365570 23. Jun 15:26 log.38921013._052025.job.log.tgz.1
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc        28 23. Jun 15:26 wrapper_checkpoint.txt
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc      8192 23. Jun 15:26 boinc_mmap_file
[2024-06-23 15:26:37] -rw------- 1 boinc boinc      7677 23. Jun 15:26 heartbeat.json
[2024-06-23 15:26:37] -rw------- 1 boinc boinc      4283 23. Jun 15:26 pilotlog.txt
[2024-06-23 15:26:37] -rw------- 1 boinc boinc   1278293 23. Jun 15:26 log.38921013._052025.job.log.1
[2024-06-23 15:26:37] -rw------- 1 boinc boinc       357 23. Jun 15:26 output.list
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc       620 23. Jun 15:26 runtime_log
[2024-06-23 15:26:37] -rw------- 1 boinc boinc   1658880 23. Jun 15:26 result.tar.gz
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc     11329 23. Jun 15:26 runtime_log.err
[2024-06-23 15:26:37] -rw------- 1 boinc boinc       635 23. Jun 15:26 0kwNDmU6ve5n7Olcko1bjSoqABFKDmABFKDmOtvXDm8KrKDmAc1oan.diag
[2024-06-23 15:26:37] -rw-r--r-- 1 boinc boinc     21220 23. Jun 15:26 stderr.txt
[2024-06-23 15:26:38] HITS file was successfully produced:
[2024-06-23 15:26:38] -rw------- 1 boinc boinc 343747431 23. Jun 15:25 shared/HITS.pool.root.1
[2024-06-23 15:26:38]  *** Contents of shared directory: ***
[2024-06-23 15:26:38] insgesamt 865488
[2024-06-23 15:26:38] -rw-r--r-- 2 boinc boinc 540338944 23. Jun 11:47 ATLAS.root_0
[2024-06-23 15:26:38] -rw-r--r-- 2 boinc boinc     17537 23. Jun 11:47 start_atlas.sh
[2024-06-23 15:26:38] -rw-r--r-- 2 boinc boinc    482517 23. Jun 11:47 input.tar.gz
[2024-06-23 15:26:38] -rw------- 1 boinc boinc 343747431 23. Jun 15:25 HITS.pool.root.1
[2024-06-23 15:26:38] -rw------- 1 boinc boinc   1658880 23. Jun 15:26 result.tar.gz
15:26:39 (3948376): run_atlas exited; CPU time 75340.095671
15:26:39 (3948376): called boinc_finish(0)

</stderr_txt>
]]>

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