Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-22 13:43:49 (849918): Detected: vboxwrapper 26206
2024-06-22 13:43:49 (849918): Detected: BOINC client v7.24.1
2024-06-22 13:43:50 (849918): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-22 13:43:50 (849918): Successfully copied 'init_data.xml' to the shared directory.
2024-06-22 13:43:50 (849918): Create VM. (boinc_ee3b661db37d0670, slot#0)
2024-06-22 13:43:50 (849918): Setting Memory Size for VM. (4800MB)
2024-06-22 13:43:50 (849918): Setting CPU Count for VM. (8)
2024-06-22 13:43:50 (849918): Setting Chipset Options for VM.
2024-06-22 13:43:50 (849918): Setting Graphics Controller Options for VM.
2024-06-22 13:43:50 (849918): Setting Boot Options for VM.
2024-06-22 13:43:50 (849918): Setting Network Configuration for NAT.
2024-06-22 13:43:50 (849918): Enabling VM Network Access.
2024-06-22 13:43:50 (849918): Disabling USB Support for VM.
2024-06-22 13:43:50 (849918): Disabling COM Port Support for VM.
2024-06-22 13:43:50 (849918): Disabling LPT Port Support for VM.
2024-06-22 13:43:50 (849918): Disabling Audio Support for VM.
2024-06-22 13:43:50 (849918): Disabling Clipboard Support for VM.
2024-06-22 13:43:50 (849918): Disabling Drag and Drop Support for VM.
2024-06-22 13:43:50 (849918): Adding storage controller(s) to VM.
2024-06-22 13:43:50 (849918): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-22 13:43:51 (849918): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-22 13:43:51 (849918): forwarding host port 57953 to guest port 80
2024-06-22 13:43:51 (849918): Enabling remote desktop for VM.
2024-06-22 13:43:52 (849918): Required extension pack not installed, remote desktop not enabled.
2024-06-22 13:43:52 (849918): Enabling shared directory for VM.
2024-06-22 13:43:52 (849918): Starting VM using VBoxManage interface. (boinc_ee3b661db37d0670, slot#0)
2024-06-22 13:43:53 (849918): Successfully started VM. (PID = '850172')
2024-06-22 13:43:53 (849918): Reporting VM Process ID to BOINC.
2024-06-22 13:43:53 (849918): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-22 13:43:53 (849918): Guest Log: CPUID EDX: 0x178bfbff
2024-06-22 13:43:53 (849918): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-22 13:43:53 (849918): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-22 13:43:53 (849918): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-22 13:43:53 (849918): Detected: Web Application Enabled (http://localhost:57953)
2024-06-22 13:43:54 (849918): VM state change detected. (old = 'running', new = 'paused')
2024-06-22 13:44:12 (849918): Preference change detected
2024-06-22 13:44:12 (849918): Setting CPU throttle for VM. (50%)
2024-06-22 13:44:12 (849918): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-22 13:44:13 (849918): VM state change detected. (old = 'paused', new = 'running')
2024-06-22 13:44:14 (849918): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-22 13:44:14 (849918): Guest Log: BIOS: Booting from Hard Disk...
2024-06-22 13:44:17 (849918): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-22 13:44:17 (849918): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-22 13:44:17 (849918): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-22 13:44:25 (849918): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-22 13:44:25 (849918): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-22 13:44:31 (849918): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000074 main     Log opened 2024-06-22T11:44:10.899271000Z
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000134 main     OS Product: Linux
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000148 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000159 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000172 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000173 main     Process ID: 1360
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000173 main     Package type: LINUX_64BITS_GENERIC
2024-06-22 13:44:31 (849918): Guest Log: 00:00:00.000606 main     5.2.32 r132073 started. Verbose level = 0
2024-06-22 13:44:31 (849918): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-22 13:44:31 (849918): Guest Log: [INFO] Mounting shared directory
2024-06-22 13:44:31 (849918): Guest Log: [INFO] Checking for init_data.xml
2024-06-22 13:44:33 (849918): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-22 13:44:33 (849918): Guest Log: [INFO] Detected branch: prod
2024-06-22 13:44:33 (849918): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-22 13:44:33 (849918): Guest Log: Copying input files
2024-06-22 13:44:35 (849918): Guest Log: Copied input files into RunAtlas.
2024-06-22 13:44:35 (849918): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-22 13:44:35 (849918): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-22 13:44:35 (849918): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-22 13:44:35 (849918): Guest Log: Further information can be found at the LHC@home message board.
2024-06-22 13:45:48 (849918): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-22 13:45:48 (849918): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-22 13:45:48 (849918): Guest Log: 2.6.3.0 1636 1 32104 134165 4 1 3117206 4096000 0 65024 0 0 n/a 1 3 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-22 13:45:49 (849918): Guest Log: copied the webapp to /var/www
2024-06-22 13:45:49 (849918): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-22 13:45:49 (849918): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-22 13:45:49 (849918): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-22 13:45:49 (849918): Guest Log:  *** Starting ATLAS job. (PandaID=6239867577 taskID=40024031) ***
2024-06-22 15:23:12 (849918): Status Report: Elapsed Time: '6000.000000'
2024-06-22 15:23:12 (849918): Status Report: CPU Time: '18745.950000'
2024-06-22 16:02:05 (849918): Guest Log:  *** Job finished ***
2024-06-22 16:02:05 (849918): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:38,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:38,926 | INFO     | [job] queue monitor thread has finished
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:42,455 | INFO     | [data] queue_monitor thread has finished
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:43,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836982998848)>', '<ExcThread(monitor, started 139836367279872)>']
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:43,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:43,902 | INFO     | [monitor] control thread has ended
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,108 | INFO     | all workflow threads have been joined
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,108 | INFO     | end of generic workflow (traces error code: 0)
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,108 | INFO     | traces error code: 0
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,154 [wrapper] ==== pilot stdout END ====
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,157 [wrapper] ==== wrapper stdout RESUME ====
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,159 [wrapper] pilotpid: 6581
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,161 [wrapper] Pilot exit status: 0
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,173 [wrapper] pandaids: 6239867577
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,188 [wrapper] cleanup supervisor_pilot  5073 6582
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,190 [wrapper] Test setup, not cleaning
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,192 [wrapper] ==== wrapper stdout END ====
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,195 [wrapper] ==== wrapper stderr END ====
2024-06-22 16:02:05 (849918): Guest Log: 2024-06-22 14:01:48,199 [wrapper] apfmon messages muted
2024-06-22 16:02:06 (849918): Guest Log:  *** Error codes and diagnostics ***
2024-06-22 16:02:06 (849918): Guest Log:     "exeErrorCode": 0,
2024-06-22 16:02:06 (849918): Guest Log:     "exeErrorDiag": "",
2024-06-22 16:02:06 (849918): Guest Log:     "pilotErrorCode": 0,
2024-06-22 16:02:06 (849918): Guest Log:     "pilotErrorDiag": "",
2024-06-22 16:02:06 (849918): Guest Log:  *** Listing of results directory ***
2024-06-22 16:02:06 (849918): Guest Log: total 262296
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 16:12 pilot3.tar.gz
2024-06-22 16:02:06 (849918): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 16:15 runpilot2-wrapper.sh
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 16:15 queuedata.json
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas    482532 Jun 22 11:44 input.tar.gz
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas      6880 Jun 22 11:44 init_data.xml
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 22 11:44 start_atlas.sh
2024-06-22 16:02:06 (849918): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 22 11:44 EVNT.40024029._000011.pool.root.1 -> /data/./ATLAS.root_0
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas      2571 Jun 22 11:45 pandaJob.out
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas       424 Jun 22 11:45 setup.sh.local
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas   1025930 Jun 22 11:46 agis_schedconf.cvmfs.json
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas         0 Jun 22 11:46 agis_ddmendpoints.agis.ALL.json
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 22 11:46 cric_ddmendpoints.json
2024-06-22 16:02:06 (849918): Guest Log: drwx------. 4 atlas atlas      4096 Jun 22 11:46 pilot3
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas 263617353 Jun 22 14:00 HITS.40024031._001226.pool.root.1
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas        95 Jun 22 14:01 pilot_heartbeat.json
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas      1029 Jun 22 14:01 memory_monitor_summary.json
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas    306266 Jun 22 14:01 log.40024031._001226.job.log.tgz.1
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas      7727 Jun 22 14:01 heartbeat.json
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas      4271 Jun 22 14:01 pilotlog.txt
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas    449917 Jun 22 14:01 log.40024031._001226.job.log.1
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas       357 Jun 22 14:01 output.list
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 22 14:01 runtime_log
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas    778240 Jun 22 14:01 result.tar.gz
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas       671 Jun 22 14:01 wWZNDmB6ve5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmwumKDmIwkBAo.diag
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 atlas atlas     11014 Jun 22 14:01 runtime_log.err
2024-06-22 16:02:06 (849918): Guest Log: Looking for outputfile HITS.40024031._001226.pool.root.1
2024-06-22 16:02:06 (849918): Guest Log: HITS file was successfully produced
2024-06-22 16:02:06 (849918): Guest Log: -rw-------. 1 atlas atlas 263617353 Jun 22 14:00 /home/atlas/RunAtlas/HITS.40024031._001226.pool.root.1
2024-06-22 16:02:06 (849918): Guest Log: Successfully finished the ATLAS job!
2024-06-22 16:02:06 (849918): Guest Log: Copying the results back to the shared directory!
2024-06-22 16:02:06 (849918): Guest Log:  *** Contents of shared directory: ***
2024-06-22 16:02:06 (849918): Guest Log: total 583628
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 root root 596340305 Jun 22 11:43 ATLAS.root_0
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 root root      6880 Jun 22 11:43 init_data.xml
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 root root    482532 Jun 22 11:43 input.tar.gz
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 root root    778240 Jun 22  2024 result.tar.gz
2024-06-22 16:02:06 (849918): Guest Log: -rw-r--r--. 1 root root     17537 Jun 22 11:43 start_atlas.sh
2024-06-22 16:02:06 (849918): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-22 16:02:06 (849918): VM Completion File Detected.
2024-06-22 16:02:06 (849918): Powering off VM.
2024-06-22 16:02:06 (849918): Successfully stopped VM.
2024-06-22 16:02:06 (849918): Deregistering VM. (boinc_ee3b661db37d0670, slot#0)
2024-06-22 16:02:06 (849918): Removing network bandwidth throttle group from VM.
2024-06-22 16:02:06 (849918): Removing VM from VirtualBox.
16:02:11 (849918): called boinc_finish(0)

</stderr_txt>
]]>

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