Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-22 14:18:53 (95701): Detected: vboxwrapper 26206
2024-06-22 14:18:53 (95701): Detected: BOINC client v7.24.1
2024-06-22 14:18:53 (95701): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-22 14:18:53 (95701): Successfully copied 'init_data.xml' to the shared directory.
2024-06-22 14:18:53 (95701): Create VM. (boinc_242e70b9de31cf23, slot#0)
2024-06-22 14:18:53 (95701): Setting Memory Size for VM. (4400MB)
2024-06-22 14:18:53 (95701): Setting CPU Count for VM. (4)
2024-06-22 14:18:53 (95701): Setting Chipset Options for VM.
2024-06-22 14:18:53 (95701): Setting Graphics Controller Options for VM.
2024-06-22 14:18:53 (95701): Setting Boot Options for VM.
2024-06-22 14:18:54 (95701): Setting Network Configuration for NAT.
2024-06-22 14:18:54 (95701): Enabling VM Network Access.
2024-06-22 14:18:54 (95701): Disabling USB Support for VM.
2024-06-22 14:18:54 (95701): Disabling COM Port Support for VM.
2024-06-22 14:18:54 (95701): Disabling LPT Port Support for VM.
2024-06-22 14:18:54 (95701): Disabling Audio Support for VM.
2024-06-22 14:18:54 (95701): Disabling Clipboard Support for VM.
2024-06-22 14:18:54 (95701): Disabling Drag and Drop Support for VM.
2024-06-22 14:18:54 (95701): Adding storage controller(s) to VM.
2024-06-22 14:18:55 (95701): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-22 14:18:56 (95701): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-22 14:18:56 (95701): forwarding host port 38703 to guest port 80
2024-06-22 14:18:56 (95701): Enabling remote desktop for VM.
2024-06-22 14:18:57 (95701): Required extension pack not installed, remote desktop not enabled.
2024-06-22 14:18:57 (95701): Enabling shared directory for VM.
2024-06-22 14:18:57 (95701): Starting VM using VBoxManage interface. (boinc_242e70b9de31cf23, slot#0)
2024-06-22 14:18:58 (95701): Successfully started VM. (PID = '95961')
2024-06-22 14:18:58 (95701): Reporting VM Process ID to BOINC.
2024-06-22 14:18:58 (95701): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-22 14:18:58 (95701): Guest Log: CPUID EDX: 0x178bfbff
2024-06-22 14:18:58 (95701): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-22 14:18:58 (95701): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-22 14:18:58 (95701): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-22 14:18:58 (95701): Detected: Web Application Enabled (http://localhost:38703)
2024-06-22 14:18:58 (95701): Preference change detected
2024-06-22 14:18:58 (95701): Setting CPU throttle for VM. (50%)
2024-06-22 14:18:58 (95701): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-22 14:19:00 (95701): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-22 14:19:00 (95701): Guest Log: BIOS: Booting from Hard Disk...
2024-06-22 14:19:04 (95701): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-22 14:19:04 (95701): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-22 14:19:04 (95701): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-22 14:19:13 (95701): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-22 14:19:13 (95701): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-22 14:19:26 (95701): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.000459 main     Log opened 2024-06-22T12:19:24.082683000Z
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.000816 main     OS Product: Linux
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.000919 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.000991 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.001060 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.001063 main     Process ID: 1294
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.001065 main     Package type: LINUX_64BITS_GENERIC
2024-06-22 14:19:26 (95701): Guest Log: 00:00:00.003985 main     5.2.32 r132073 started. Verbose level = 0
2024-06-22 14:19:28 (95701): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-22 14:19:28 (95701): Guest Log: [INFO] Mounting shared directory
2024-06-22 14:19:28 (95701): Guest Log: [INFO] Checking for init_data.xml
2024-06-22 14:19:34 (95701): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-22 14:19:34 (95701): Guest Log: [INFO] Detected branch: prod
2024-06-22 14:19:34 (95701): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-22 14:19:34 (95701): Guest Log: Copying input files
2024-06-22 14:19:41 (95701): Guest Log: Copied input files into RunAtlas.
2024-06-22 14:19:41 (95701): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-22 14:19:41 (95701): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-22 14:19:41 (95701): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-22 14:19:41 (95701): Guest Log: Further information can be found at the LHC@home message board.
2024-06-22 14:19:51 (95701): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-22 14:19:51 (95701): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-22 14:19:51 (95701): Guest Log: 2.6.3.0 1572 0 32260 134166 4 1 3117206 4096000 0 65024 0 0 n/a 1 3 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-22 14:19:55 (95701): Guest Log: copied the webapp to /var/www
2024-06-22 14:19:55 (95701): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-22 14:19:55 (95701): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-22 14:19:55 (95701): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-22 14:19:55 (95701): Guest Log:  *** Starting ATLAS job. (PandaID=6239800168 taskID=38921013) ***
2024-06-22 15:57:59 (95701): Status Report: Elapsed Time: '6000.000000'
2024-06-22 15:57:59 (95701): Status Report: CPU Time: '9926.000000'
2024-06-22 17:36:59 (95701): Status Report: Elapsed Time: '12000.000000'
2024-06-22 17:36:59 (95701): Status Report: CPU Time: '22225.630000'
2024-06-22 19:16:00 (95701): Status Report: Elapsed Time: '18000.000000'
2024-06-22 19:16:00 (95701): Status Report: CPU Time: '34554.450000'
2024-06-22 20:55:00 (95701): Status Report: Elapsed Time: '24000.000000'
2024-06-22 20:55:00 (95701): Status Report: CPU Time: '46884.780000'
2024-06-22 22:34:01 (95701): Status Report: Elapsed Time: '30000.000000'
2024-06-22 22:34:01 (95701): Status Report: CPU Time: '59220.360000'
2024-06-22 23:40:01 (95701): Guest Log:  *** Job finished ***
2024-06-22 23:40:01 (95701): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:46,316 | INFO     | [data] copytool_out thread has finished
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:46,660 | INFO     | [job] queue monitor thread has finished
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:50,277 | INFO     | [data] queue_monitor thread has finished
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:51,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500318426944)>', '<ExcThread(monitor, started 140499579037440)>']
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:52,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:52,790 | INFO     | [monitor] control thread has ended
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:56,972 | INFO     | all workflow threads have been joined
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:56,972 | INFO     | end of generic workflow (traces error code: 0)
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:56,973 | INFO     | traces error code: 0
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:56,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,050 [wrapper] ==== pilot stdout END ====
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,054 [wrapper] ==== wrapper stdout RESUME ====
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,058 [wrapper] pilotpid: 6470
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,062 [wrapper] Pilot exit status: 0
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,120 [wrapper] pandaids: 6239800168
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,210 [wrapper] cleanup supervisor_pilot  4310 6471
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,216 [wrapper] Test setup, not cleaning
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,221 [wrapper] ==== wrapper stdout END ====
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,227 [wrapper] ==== wrapper stderr END ====
2024-06-22 23:40:01 (95701): Guest Log: 2024-06-22 21:39:57,238 [wrapper] apfmon messages muted
2024-06-22 23:40:01 (95701): Guest Log:  *** Error codes and diagnostics ***
2024-06-22 23:40:01 (95701): Guest Log:     "exeErrorCode": 0,
2024-06-22 23:40:01 (95701): Guest Log:     "exeErrorDiag": "",
2024-06-22 23:40:01 (95701): Guest Log:     "pilotErrorCode": 0,
2024-06-22 23:40:01 (95701): Guest Log:     "pilotErrorDiag": "",
2024-06-22 23:40:01 (95701): Guest Log:  *** Listing of results directory ***
2024-06-22 23:40:01 (95701): Guest Log: total 351576
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 14:10 pilot3.tar.gz
2024-06-22 23:40:01 (95701): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 14:33 runpilot2-wrapper.sh
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 14:33 queuedata.json
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas      6656 Jun 22 12:19 init_data.xml
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas    482532 Jun 22 12:19 input.tar.gz
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 22 12:19 start_atlas.sh
2024-06-22 23:40:01 (95701): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 22 12:19 EVNT.38776210._000405.pool.root.1 -> /data/./ATLAS.root_0
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas      2644 Jun 22 12:19 pandaJob.out
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas       424 Jun 22 12:20 setup.sh.local
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas   1025938 Jun 22 12:21 agis_schedconf.cvmfs.json
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 22 12:21 cric_ddmendpoints.json
2024-06-22 23:40:01 (95701): Guest Log: drwx------. 4 atlas atlas      4096 Jun 22 12:21 pilot3
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas 351563578 Jun 22 21:38 HITS.38921013._051937.pool.root.1
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas        95 Jun 22 21:39 pilot_heartbeat.json
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas      1033 Jun 22 21:39 memory_monitor_summary.json
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas         0 Jun 22 21:39 agis_ddmendpoints.agis.ALL.json
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas    423778 Jun 22 21:39 log.38921013._051937.job.log.tgz.1
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas      7743 Jun 22 21:39 heartbeat.json
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas      4271 Jun 22 21:39 pilotlog.txt
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas   2069950 Jun 22 21:39 log.38921013._051937.job.log.1
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas       357 Jun 22 21:39 output.list
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 22 21:39 runtime_log
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas   2508800 Jun 22 21:39 result.tar.gz
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas       675 Jun 22 21:39 xl7KDmHVue5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmSpmKDmilaH4n.diag
2024-06-22 23:40:01 (95701): Guest Log: -rw-r--r--. 1 atlas atlas     11012 Jun 22 21:39 runtime_log.err
2024-06-22 23:40:01 (95701): Guest Log: Looking for outputfile HITS.38921013._051937.pool.root.1
2024-06-22 23:40:01 (95701): Guest Log: HITS file was successfully produced
2024-06-22 23:40:01 (95701): Guest Log: -rw-------. 1 atlas atlas 351563578 Jun 22 21:38 /home/atlas/RunAtlas/HITS.38921013._051937.pool.root.1
2024-06-22 23:40:02 (95701): Guest Log: Successfully finished the ATLAS job!
2024-06-22 23:40:02 (95701): Guest Log: Copying the results back to the shared directory!
2024-06-22 23:40:02 (95701): Guest Log:  *** Contents of shared directory: ***
2024-06-22 23:40:02 (95701): Guest Log: total 534044
2024-06-22 23:40:02 (95701): Guest Log: -rw-r--r--. 1 root root 543833568 Jun 22 12:18 ATLAS.root_0
2024-06-22 23:40:02 (95701): Guest Log: -rw-r--r--. 1 root root      6656 Jun 22 12:18 init_data.xml
2024-06-22 23:40:02 (95701): Guest Log: -rw-r--r--. 1 root root    482532 Jun 22 12:18 input.tar.gz
2024-06-22 23:40:02 (95701): Guest Log: -rw-r--r--. 1 root root   2508800 Jun 22 21:40 result.tar.gz
2024-06-22 23:40:02 (95701): Guest Log: -rw-r--r--. 1 root root     17537 Jun 22 12:18 start_atlas.sh
2024-06-22 23:40:02 (95701): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-22 23:40:02 (95701): VM Completion File Detected.
2024-06-22 23:40:02 (95701): Powering off VM.
2024-06-22 23:40:03 (95701): Successfully stopped VM.
2024-06-22 23:40:03 (95701): Deregistering VM. (boinc_242e70b9de31cf23, slot#0)
2024-06-22 23:40:03 (95701): Removing network bandwidth throttle group from VM.
2024-06-22 23:40:03 (95701): Removing VM from VirtualBox.
23:40:08 (95701): called boinc_finish(0)

</stderr_txt>
]]>

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