Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:23:55 (879500): wrapper (7.7.26015): starting
06:23:55 (879500): wrapper: running run_atlas (--nthreads 4)
[2024-06-24 06:23:55] Arguments: --nthreads 4
[2024-06-24 06:23:55] Threads: 4
[2024-06-24 06:23:55] Checking for CVMFS
[2024-06-24 06:23:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-24 06:23:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-24 06:23:55] Running cvmfs_config stat atlas.cern.ch
[2024-06-24 06:23:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-24 06:23:56] 2.11.2.0 7702 19886 59636 134225 0 55 3297952 6144001 915 130560 0 25335471 99.986 3358230 6224 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-24 06:23:56] CVMFS is ok
[2024-06-24 06:23:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-24 06:23:56] Checking for apptainer binary...
[2024-06-24 06:23:56] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-24 06:23:56] Running /usr/bin/apptainer --version
[2024-06-24 06:23:56] apptainer version 1.3.0
[2024-06-24 06:23:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-24 06:23:56] Opti7020b
[2024-06-24 06:23:56] apptainer works
[2024-06-24 06:23:56] Set ATHENA_PROC_NUMBER=4
[2024-06-24 06:23:56] Set ATHENA_CORE_NUMBER=4
[2024-06-24 06:23:56] Starting ATLAS job with PandaID=6239789894
[2024-06-24 06:23:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 10:01:04]  *** The last 200 lines of the pilot log: ***
[2024-06-24 10:01:04] 2024-06-24 08:00:49,107 | INFO     | total number of processed events: 400 (read)
[2024-06-24 10:01:04] 2024-06-24 08:00:49,108 | INFO     | executing command: lscpu
[2024-06-24 10:01:04] 2024-06-24 08:00:49,122 | INFO     | found 4 cores (4 cores per socket, 1 sockets)
[2024-06-24 10:01:04] 2024-06-24 08:00:49,123 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-24 10:01:04] 2024-06-24 08:00:49,142 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-24 10:01:04] 2024-06-24 08:00:51,324 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-24 10:01:04] 2024-06-24 08:00:51,325 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6239789894/memory_monitor_summary.json (trf name=prmon)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,325 | INFO     | extracted standard info from prmon json
[2024-06-24 10:01:04] 2024-06-24 08:00:51,325 | INFO     | extracted standard memory fields from prmon json
[2024-06-24 10:01:04] 2024-06-24 08:00:51,326 | WARNING  | GPU info not found in prmon json
[2024-06-24 10:01:04] 2024-06-24 08:00:51,326 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 10:01:04] 2024-06-24 08:00:51,326 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 10:01:04] 2024-06-24 08:00:51,329 | INFO     | fitting pss+swap vs Time
[2024-06-24 10:01:04] 2024-06-24 08:00:51,329 | INFO     | model: linear, x: [1719203066.0, 1719203127.0, 1719203188.0, 1719203249.0, 1719203310.0, 1719203371.0, 1719203432.0, 1719203493.0, 1719203554.0, 1719203615.0, 1719
[2024-06-24 10:01:04] 2024-06-24 08:00:51,330 | INFO     | sum of square deviations: 2954447953.0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,331 | INFO     | sum of deviations: -34904408284.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,331 | INFO     | mean x: 1719209501.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,331 | INFO     | mean y: 2479589.8443396227
[2024-06-24 10:01:04] 2024-06-24 08:00:51,331 | INFO     | -- intersect: 20313546605.262405
[2024-06-24 10:01:04] 2024-06-24 08:00:51,331 | INFO     | intersect: 20313546605.262405
[2024-06-24 10:01:04] 2024-06-24 08:00:51,331 | INFO     | chi2: 2.250334826417497
[2024-06-24 10:01:04] 2024-06-24 08:00:51,332 | INFO     | model: linear, x: [1719203066.0, 1719203127.0, 1719203188.0, 1719203249.0, 1719203310.0, 1719203371.0, 1719203432.0, 1719203493.0, 1719203554.0, 1719203615.0, 1719
[2024-06-24 10:01:04] 2024-06-24 08:00:51,332 | INFO     | sum of square deviations: 2750295288.0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,333 | INFO     | sum of deviations: -33385032636.999996
[2024-06-24 10:01:04] 2024-06-24 08:00:51,333 | INFO     | mean x: 1719209349.0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,333 | INFO     | mean y: 2480725.0096618356
[2024-06-24 10:01:04] 2024-06-24 08:00:51,333 | INFO     | -- intersect: 20871461767.382927
[2024-06-24 10:01:04] 2024-06-24 08:00:51,333 | INFO     | intersect: 20871461767.382927
[2024-06-24 10:01:04] 2024-06-24 08:00:51,333 | INFO     | chi2: 2.247493140906128
[2024-06-24 10:01:04] 2024-06-24 08:00:51,334 | INFO     | current chi2=2.247493140906128 (change=0.1262783421386684 %)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,334 | INFO     | right removable region: 206
[2024-06-24 10:01:04] 2024-06-24 08:00:51,334 | INFO     | model: linear, x: [1719203371.0, 1719203432.0, 1719203493.0, 1719203554.0, 1719203615.0, 1719203676.0, 1719203737.0, 1719203798.0, 1719203859.0, 1719203920.0, 1719
[2024-06-24 10:01:04] 2024-06-24 08:00:51,334 | INFO     | sum of square deviations: 2750295288.0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,335 | INFO     | sum of deviations: -75632382015.00002
[2024-06-24 10:01:04] 2024-06-24 08:00:51,335 | INFO     | mean x: 1719209654.0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,335 | INFO     | mean y: 2509816.033816425
[2024-06-24 10:01:04] 2024-06-24 08:00:51,335 | INFO     | -- intersect: 47280313724.049675
[2024-06-24 10:01:04] 2024-06-24 08:00:51,335 | INFO     | intersect: 47280313724.049675
[2024-06-24 10:01:04] 2024-06-24 08:00:51,336 | INFO     | chi2: 0.38333048078041276
[2024-06-24 10:01:04] 2024-06-24 08:00:51,336 | INFO     | current chi2=0.38333048078041276 (change=82.96562465814611 %)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,336 | INFO     | model: linear, x: [1719203676.0, 1719203737.0, 1719203798.0, 1719203859.0, 1719203920.0, 1719203981.0, 1719204042.0, 1719204103.0, 1719204164.0, 1719204225.0, 1719
[2024-06-24 10:01:04] 2024-06-24 08:00:51,336 | INFO     | sum of square deviations: 2555770710.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,337 | INFO     | sum of deviations: -74197884451.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,337 | INFO     | mean x: 1719209806.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,337 | INFO     | mean y: 2508652.1831683167
[2024-06-24 10:01:04] 2024-06-24 08:00:51,337 | INFO     | -- intersect: 49913766358.71547
[2024-06-24 10:01:04] 2024-06-24 08:00:51,338 | INFO     | intersect: 49913766358.71547
[2024-06-24 10:01:04] 2024-06-24 08:00:51,338 | INFO     | chi2: 0.35975085511327437
[2024-06-24 10:01:04] 2024-06-24 08:00:51,338 | INFO     | current chi2=0.35975085511327437 (change=6.1512524699661855 %)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,338 | INFO     | left removable region: 20
[2024-06-24 10:01:04] 2024-06-24 08:00:51,338 | INFO     | model: linear, x: [1719204286.0, 1719204347.0, 1719204408.0, 1719204469.0, 1719204530.0, 1719204591.0, 1719204652.0, 1719204713.0, 1719204774.0, 1719204835.0, 1719
[2024-06-24 10:01:04] 2024-06-24 08:00:51,338 | INFO     | sum of square deviations: 1995283922.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,339 | INFO     | sum of deviations: -56400052830.0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,339 | INFO     | mean x: 1719209928.5
[2024-06-24 10:01:04] 2024-06-24 08:00:51,339 | INFO     | mean y: 2497485.1612903224
[2024-06-24 10:01:04] 2024-06-24 08:00:51,339 | INFO     | -- intersect: 48598854975.86349
[2024-06-24 10:01:04] 2024-06-24 08:00:51,339 | INFO     | intersect: 48598854975.86349
[2024-06-24 10:01:04] 2024-06-24 08:00:51,340 | INFO     | chi2: 0.3392556098194569
[2024-06-24 10:01:04] 2024-06-24 08:00:51,340 | INFO     | -- intersect: 48598854975.86349
[2024-06-24 10:01:04] 2024-06-24 08:00:51,340 | INFO     | current memory leak: -28.27 B/s (using 186 data points, chi2=0.34)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,340 | INFO     | ..............................
[2024-06-24 10:01:04] 2024-06-24 08:00:51,340 | INFO     | . Timing measurements:
[2024-06-24 10:01:04] 2024-06-24 08:00:51,340 | INFO     | . get job = 0 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | . initial setup = 1 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | . payload setup = 3 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | . stage-in = 0 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | . payload execution = 12924 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | . stage-out = 0 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | . log creation = 0 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,341 | INFO     | ..............................
[2024-06-24 10:01:04] 2024-06-24 08:00:51,512 | INFO     | 
[2024-06-24 10:01:04] 2024-06-24 08:00:51,512 | INFO     | job summary report
[2024-06-24 10:01:04] 2024-06-24 08:00:51,512 | INFO     | --------------------------------------------------
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | PanDA job id: 6239789894
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | task id: 40024058
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | errors: (none)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | pilot state: finished 
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | transexitcode: 0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | exeerrorcode: 0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | exeerrordiag: 
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | exitcode: 0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | exitmsg: OK
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | cpuconsumptiontime: 49503 s
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | nevents: 400
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | neventsw: 0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,513 | INFO     | pid: 890128
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | pgrp: 890128
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | corecount: 4
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | event service: False
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | sizes: {0: 2386821, 1: 2387020, 3: 2387226, 11: 2387254, 12990: 2417360, 12991: 2426504, 12995: 2426448}
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | --------------------------------------------------
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | 
[2024-06-24 10:01:04] 2024-06-24 08:00:51,514 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 10:01:04] 2024-06-24 08:00:51,529 | INFO     | job 6239789894 has completed (purged errors)
[2024-06-24 10:01:04] 2024-06-24 08:00:51,530 | INFO     | overall cleanup function is called
[2024-06-24 10:01:04] 2024-06-24 08:00:52,533 | INFO     | --- collectZombieJob: --- 10, [890128]
[2024-06-24 10:01:04] 2024-06-24 08:00:52,534 | INFO     | zombie collector waiting for pid 890128
[2024-06-24 10:01:04] 2024-06-24 08:00:52,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 10:01:04] 2024-06-24 08:00:53,539 | INFO     | collected zombie processes
[2024-06-24 10:01:04] 2024-06-24 08:00:53,539 | INFO     | will now attempt to kill all subprocesses of pid=890128
[2024-06-24 10:01:04] 2024-06-24 08:00:53,590 | INFO     | process IDs to be killed: [890128] (in reverse order)
[2024-06-24 10:01:04] 2024-06-24 08:00:53,620 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 10:01:04] 2024-06-24 08:00:53,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 10:01:04] 2024-06-24 08:00:53,623 | INFO     | did not find any defunct processes belonging to 890128
[2024-06-24 10:01:04] 2024-06-24 08:00:53,625 | INFO     | did not find any defunct processes belonging to 890128
[2024-06-24 10:01:04] 2024-06-24 08:00:53,625 | INFO     | ready for new job
[2024-06-24 10:01:04] 2024-06-24 08:00:53,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 10:01:04] 2024-06-24 08:00:53,626 | INFO     | *************************************
[2024-06-24 10:01:04] 2024-06-24 08:00:53,627 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 10:01:04] 2024-06-24 08:00:53,627 | INFO     | *************************************
[2024-06-24 10:01:04] 2024-06-24 08:00:53,627 | INFO     | 
[2024-06-24 10:01:04] 2024-06-24 08:00:53,627 | INFO     | architecture information:
[2024-06-24 10:01:04] 2024-06-24 08:00:53,627 | INFO     | executing command: cat /etc/os-release
[2024-06-24 10:01:04] 2024-06-24 08:00:53,638 | INFO     | cat /etc/os-release:
[2024-06-24 10:01:04] NAME="CentOS Linux"
[2024-06-24 10:01:04] VERSION="7 (Core)"
[2024-06-24 10:01:04] ID="centos"
[2024-06-24 10:01:04] ID_LIKE="rhel fedora"
[2024-06-24 10:01:04] VERSION_ID="7"
[2024-06-24 10:01:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 10:01:04] ANSI_COLOR="0;31"
[2024-06-24 10:01:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 10:01:04] HOME_URL="https://www.centos.org/"
[2024-06-24 10:01:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 10:01:04] 
[2024-06-24 10:01:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 10:01:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 10:01:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 10:01:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 10:01:04] 
[2024-06-24 10:01:04] 2024-06-24 08:00:53,638 | INFO     | *************************************
[2024-06-24 10:01:04] 2024-06-24 08:00:54,140 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-24 10:01:04] 2024-06-24 08:00:54,151 | INFO     | sufficient remaining disk space (175049277440 B)
[2024-06-24 10:01:04] 2024-06-24 08:00:54,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 10:01:04] 2024-06-24 08:00:54,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 10:01:04] 2024-06-24 08:00:54,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 10:01:04] 2024-06-24 08:00:54,364 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 10:01:04] 2024-06-24 08:00:54,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 10:01:04] 2024-06-24 08:00:54,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 10:01:04] 2024-06-24 08:00:54,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 10:01:04] 2024-06-24 08:00:54,864 | INFO     | aborting loop
[2024-06-24 10:01:04] 2024-06-24 08:00:54,986 | INFO     | all data control threads have been joined
[2024-06-24 10:01:04] 2024-06-24 08:00:55,155 | INFO     | [job] retrieve thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,182 | INFO     | [payload] failed_post thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,254 | INFO     | [data] copytool_in thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,514 | INFO     | all payload control threads have been joined
[2024-06-24 10:01:04] 2024-06-24 08:00:55,543 | INFO     | [job] validate thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 10:01:04] 2024-06-24 08:00:55,659 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,738 | INFO     | all job control threads have been joined
[2024-06-24 10:01:04] 2024-06-24 08:00:55,764 | INFO     | [payload] validate_post thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,869 | INFO     | [job] job monitor thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,877 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,915 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:55,991 | INFO     | [data] control thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:56,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 10:01:04] 2024-06-24 08:00:56,434 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:56,520 | INFO     | [payload] control thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:56,744 | INFO     | [job] control thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:57,434 | INFO     | [job] queue monitor thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:57,658 | INFO     | [data] copytool_out thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:58,157 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 10:01:04] 2024-06-24 08:00:58,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139866489780032)>', '<ExcThread(monitor, started 139865853249280)>']
[2024-06-24 10:01:04] 2024-06-24 08:00:59,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 10:01:04] 2024-06-24 08:00:59,384 | INFO     | [monitor] control thread has ended
[2024-06-24 10:01:04] 2024-06-24 08:01:03,936 | INFO     | all workflow threads have been joined
[2024-06-24 10:01:04] 2024-06-24 08:01:03,936 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 10:01:04] 2024-06-24 08:01:03,936 | INFO     | traces error code: 0
[2024-06-24 10:01:04] 2024-06-24 08:01:03,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 10:01:04] 2024-06-24 08:01:04,022 [wrapper] ==== pilot stdout END ====
[2024-06-24 10:01:04] 2024-06-24 08:01:04,024 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 10:01:04] 2024-06-24 08:01:04,026 [wrapper] pilotpid: 883685
[2024-06-24 10:01:04] 2024-06-24 08:01:04,027 [wrapper] Pilot exit status: 0
[2024-06-24 10:01:04] 2024-06-24 08:01:04,033 [wrapper] pandaids: 6239789894
[2024-06-24 10:01:04] 2024-06-24 08:01:04,052 [wrapper] cleanup supervisor_pilot  952159 883686
[2024-06-24 10:01:04] 2024-06-24 08:01:04,054 [wrapper] Test setup, not cleaning
[2024-06-24 10:01:04] 2024-06-24 08:01:04,056 [wrapper] ==== wrapper stdout END ====
[2024-06-24 10:01:04] 2024-06-24 08:01:04,057 [wrapper] ==== wrapper stderr END ====
[2024-06-24 10:01:04] 2024-06-24 08:01:04,061 [wrapper] apfmon messages muted
[2024-06-24 10:01:04]  *** Error codes and diagnostics ***
[2024-06-24 10:01:04]     "exeErrorCode": 0,
[2024-06-24 10:01:04]     "exeErrorDiag": "",
[2024-06-24 10:01:04]     "pilotErrorCode": 0,
[2024-06-24 10:01:04]     "pilotErrorDiag": "",
[2024-06-24 10:01:04]  *** Listing of results directory ***
[2024-06-24 10:01:04] insgesamt 878940
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc    469766 21. Jun 15:53 pilot3.tar.gz
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc      5654 21. Jun 16:05 queuedata.json
[2024-06-24 10:01:04] -rwx------ 1 boinc boinc     32308 21. Jun 16:05 runpilot2-wrapper.sh
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc       100 24. Jun 06:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 10:01:04] -rwxr-xr-x 1 boinc boinc      7986 24. Jun 06:23 run_atlas
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc       105 24. Jun 06:23 job.xml
[2024-06-24 10:01:04] -rw-r--r-- 2 boinc boinc 616001870 24. Jun 06:23 EVNT.40024055._000008.pool.root.1
[2024-06-24 10:01:04] drwxrwx--x 2 boinc boinc      4096 24. Jun 06:23 shared
[2024-06-24 10:01:04] -rw-r--r-- 2 boinc boinc    482509 24. Jun 06:23 input.tar.gz
[2024-06-24 10:01:04] -rw-r--r-- 2 boinc boinc     17537 24. Jun 06:23 start_atlas.sh
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc         0 24. Jun 06:23 boinc_lockfile
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc      2554 24. Jun 06:23 pandaJob.out
[2024-06-24 10:01:04] -rw------- 1 boinc boinc       461 24. Jun 06:23 setup.sh.local
[2024-06-24 10:01:04] -rw------- 1 boinc boinc   1024686 24. Jun 06:24 agis_schedconf.cvmfs.json
[2024-06-24 10:01:04] -rw------- 1 boinc boinc   1321363 24. Jun 06:24 cric_ddmendpoints.json
[2024-06-24 10:01:04] drwx------ 4 boinc boinc      4096 24. Jun 06:24 pilot3
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc      6575 24. Jun 06:25 init_data.xml
[2024-06-24 10:01:04] -rw------- 1 boinc boinc 277364504 24. Jun 09:59 HITS.40024058._001482.pool.root.1
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc       531 24. Jun 09:59 boinc_task_state.xml
[2024-06-24 10:01:04] -rw------- 1 boinc boinc      1024 24. Jun 09:59 memory_monitor_summary.json
[2024-06-24 10:01:04] -rw------- 1 boinc boinc        95 24. Jun 10:00 pilot_heartbeat.json
[2024-06-24 10:01:04] -rw------- 1 boinc boinc         0 24. Jun 10:00 agis_ddmendpoints.agis.ALL.json
[2024-06-24 10:01:04] -rw------- 1 boinc boinc    323445 24. Jun 10:00 log.40024058._001482.job.log.tgz.1
[2024-06-24 10:01:04] -rw------- 1 boinc boinc      7677 24. Jun 10:00 heartbeat.json
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc      8192 24. Jun 10:00 boinc_mmap_file
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc        28 24. Jun 10:00 wrapper_checkpoint.txt
[2024-06-24 10:01:04] -rw------- 1 boinc boinc      4212 24. Jun 10:01 pilotlog.txt
[2024-06-24 10:01:04] -rw------- 1 boinc boinc   1241005 24. Jun 10:01 log.40024058._001482.job.log.1
[2024-06-24 10:01:04] -rw------- 1 boinc boinc       357 24. Jun 10:01 output.list
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc       620 24. Jun 10:01 runtime_log
[2024-06-24 10:01:04] -rw------- 1 boinc boinc   1587200 24. Jun 10:01 result.tar.gz
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc     11344 24. Jun 10:01 runtime_log.err
[2024-06-24 10:01:04] -rw------- 1 boinc boinc       639 24. Jun 10:01 OsnLDm14te5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmznmKDmuIbVWo.diag
[2024-06-24 10:01:04] -rw-r--r-- 1 boinc boinc     21288 24. Jun 10:01 stderr.txt
[2024-06-24 10:01:04] HITS file was successfully produced:
[2024-06-24 10:01:04] -rw------- 1 boinc boinc 277364504 24. Jun 09:59 shared/HITS.pool.root.1
[2024-06-24 10:01:04]  *** Contents of shared directory: ***
[2024-06-24 10:01:04] insgesamt 874484
[2024-06-24 10:01:04] -rw-r--r-- 2 boinc boinc 616001870 24. Jun 06:23 ATLAS.root_0
[2024-06-24 10:01:04] -rw-r--r-- 2 boinc boinc    482509 24. Jun 06:23 input.tar.gz
[2024-06-24 10:01:04] -rw-r--r-- 2 boinc boinc     17537 24. Jun 06:23 start_atlas.sh
[2024-06-24 10:01:04] -rw------- 1 boinc boinc 277364504 24. Jun 09:59 HITS.pool.root.1
[2024-06-24 10:01:04] -rw------- 1 boinc boinc   1587200 24. Jun 10:01 result.tar.gz
10:01:05 (879500): run_atlas exited; CPU time 49485.173605
10:01:05 (879500): called boinc_finish(0)

</stderr_txt>
]]>

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