Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 20:41:11 (12604): Detected: vboxwrapper 26206
2024-06-21 20:41:11 (12604): Detected: BOINC client v8.0.2
2024-06-21 20:41:11 (12604): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-21 20:41:11 (12604): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 20:41:12 (12604): Create VM. (boinc_a656ff88fe16ae77, slot#0)
2024-06-21 20:41:12 (12604): Setting Memory Size for VM. (4400MB)
2024-06-21 20:41:13 (12604): Setting CPU Count for VM. (4)
2024-06-21 20:41:13 (12604): Setting Chipset Options for VM.
2024-06-21 20:41:13 (12604): Setting Graphics Controller Options for VM.
2024-06-21 20:41:13 (12604): Setting Boot Options for VM.
2024-06-21 20:41:14 (12604): Setting Network Configuration for NAT.
2024-06-21 20:41:14 (12604): Enabling VM Network Access.
2024-06-21 20:41:14 (12604): Disabling USB Support for VM.
2024-06-21 20:41:15 (12604): Disabling COM Port Support for VM.
2024-06-21 20:41:15 (12604): Disabling LPT Port Support for VM.
2024-06-21 20:41:15 (12604): Disabling Audio Support for VM.
2024-06-21 20:41:15 (12604): Disabling Clipboard Support for VM.
2024-06-21 20:41:16 (12604): Disabling Drag and Drop Support for VM.
2024-06-21 20:41:16 (12604): Adding storage controller(s) to VM.
2024-06-21 20:41:16 (12604): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 20:41:17 (12604): Adding VirtualBox Guest Additions to VM.
2024-06-21 20:41:17 (12604): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 20:41:17 (12604): forwarding host port 52106 to guest port 80
2024-06-21 20:41:17 (12604): Enabling remote desktop for VM.
2024-06-21 20:41:18 (12604): Enabling shared directory for VM.
2024-06-21 20:41:19 (12604): Starting VM using VBoxManage interface. (boinc_a656ff88fe16ae77, slot#0)
2024-06-21 20:41:25 (12604): Successfully started VM. (PID = '8896')
2024-06-21 20:41:25 (12604): Reporting VM Process ID to BOINC.
2024-06-21 20:41:25 (12604): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-21 20:41:25 (12604): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 20:41:25 (12604): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 20:41:25 (12604): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 20:41:25 (12604): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 20:41:25 (12604): Detected: Web Application Enabled (http://localhost:52106)
2024-06-21 20:41:25 (12604): Detected: Remote Desktop Enabled (localhost:52107)
2024-06-21 20:41:25 (12604): Preference change detected
2024-06-21 20:41:25 (12604): Setting CPU throttle for VM. (100%)
2024-06-21 20:41:25 (12604): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 20:41:27 (12604): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 20:41:27 (12604): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 20:41:33 (12604): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 20:41:33 (12604): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 20:41:33 (12604): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 20:41:56 (12604): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 20:41:56 (12604): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 20:42:19 (12604): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000105 main     Log opened 2024-06-21T20:42:16.477912000Z
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000185 main     OS Product: Linux
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000212 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000233 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000257 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000257 main     Process ID: 1323
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.000258 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 20:42:19 (12604): Guest Log: 00:00:00.001184 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 20:42:19 (12604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 20:42:19 (12604): Guest Log: [INFO] Mounting shared directory
2024-06-21 20:42:19 (12604): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 20:42:24 (12604): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 20:42:24 (12604): Guest Log: [INFO] Detected branch: prod
2024-06-21 20:42:24 (12604): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 20:42:24 (12604): Guest Log: Copying input files
2024-06-21 20:42:29 (12604): Guest Log: 00:00:10.156259 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 219 104 000ns (GuestNow=1 718 995 348 329 457 000 ns GuestLast=1 719 002 536 548 561 000 ns fSetTimeLastLoop=true )
2024-06-21 20:42:29 (12604): Guest Log: Copied input files into RunAtlas.
2024-06-21 20:42:29 (12604): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 20:42:29 (12604): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 20:42:29 (12604): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 20:42:29 (12604): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 20:42:38 (12604): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 20:42:39 (12604): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 20:42:39 (12604): Guest Log: 2.6.3.0 1598 0 32200 134139 4 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-21 20:42:42 (12604): Guest Log: copied the webapp to /var/www
2024-06-21 20:42:42 (12604): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-21 20:42:42 (12604): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-21 20:42:42 (12604): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 20:42:43 (12604): Guest Log:  *** Starting ATLAS job. (PandaID=6239737933 taskID=38921013) ***
2024-06-21 22:35:57 (12604): Status Report: Elapsed Time: '6000.740349'
2024-06-21 22:35:57 (12604): Status Report: CPU Time: '21664.187500'
2024-06-22 00:37:18 (12604): Status Report: Elapsed Time: '12001.261690'
2024-06-22 00:37:18 (12604): Status Report: CPU Time: '49826.781250'
2024-06-22 02:49:00 (12604): Status Report: Elapsed Time: '18001.921589'
2024-06-22 02:49:00 (12604): Status Report: CPU Time: '80520.265625'
2024-06-22 04:54:31 (12604): Status Report: Elapsed Time: '24002.332411'
2024-06-22 04:54:31 (12604): Status Report: CPU Time: '109672.234375'
2024-06-22 07:03:45 (12604): Status Report: Elapsed Time: '30002.595848'
2024-06-22 07:03:45 (12604): Status Report: CPU Time: '139261.171875'
2024-06-22 07:04:39 (12604): Guest Log:  *** Job finished ***
2024-06-22 07:04:39 (12604): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:10,477 | INFO     | [data] queue_monitor thread has finished
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:16,343 | INFO     | job.realtimelogging is not enabled
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:17,344 | INFO     | [payload] run_realtimelog thread has finished
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:18,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536398575424)>', '<ExcThread(monitor, started 140535146735360)>']
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:19,216 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:19,216 | INFO     | [monitor] control thread has ended
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:23,981 | INFO     | all workflow threads have been joined
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:23,981 | INFO     | end of generic workflow (traces error code: 0)
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:23,981 | INFO     | traces error code: 0
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:23,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,066 [wrapper] ==== pilot stdout END ====
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,103 [wrapper] ==== wrapper stdout RESUME ====
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,122 [wrapper] pilotpid: 6473
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,142 [wrapper] Pilot exit status: 0
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,250 [wrapper] pandaids: 6239737933
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,288 [wrapper] cleanup supervisor_pilot 17546 6474
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,330 [wrapper] Test setup, not cleaning
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,334 [wrapper] ==== wrapper stdout END ====
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,338 [wrapper] ==== wrapper stderr END ====
2024-06-22 07:04:39 (12604): Guest Log: 2024-06-22 05:04:24,344 [wrapper] apfmon messages muted
2024-06-22 07:04:39 (12604): Guest Log:  *** Error codes and diagnostics ***
2024-06-22 07:04:39 (12604): Guest Log:     "exeErrorCode": 0,
2024-06-22 07:04:39 (12604): Guest Log:     "exeErrorDiag": "",
2024-06-22 07:04:39 (12604): Guest Log:     "pilotErrorCode": 0,
2024-06-22 07:04:39 (12604): Guest Log:     "pilotErrorDiag": "",
2024-06-22 07:04:39 (12604): Guest Log:  *** Listing of results directory ***
2024-06-22 07:04:39 (12604): Guest Log: total 346812
2024-06-22 07:04:39 (12604): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 12:42 pilot3.tar.gz
2024-06-22 07:04:39 (12604): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 13:10 runpilot2-wrapper.sh
2024-06-22 07:04:39 (12604): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 13:10 queuedata.json
2024-06-22 07:04:39 (12604): Guest Log: -rwxr-xr-x. 1 atlas atlas      9334 Jun 21 18:42 init_data.xml
2024-06-22 07:04:39 (12604): Guest Log: -rwxr-xr-x. 1 atlas atlas    482535 Jun 21 18:42 input.tar.gz
2024-06-22 07:04:39 (12604): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 21 18:42 start_atlas.sh
2024-06-22 07:04:39 (12604): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 18:42 EVNT.38776210._000503.pool.root.1 -> /data/./ATLAS.root_0
2024-06-22 07:04:39 (12604): Guest Log: -rw-r--r--. 1 atlas atlas      2646 Jun 21 18:42 pandaJob.out
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas       424 Jun 21 18:42 setup.sh.local
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas   1025648 Jun 21 18:43 agis_schedconf.cvmfs.json
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 21 18:43 cric_ddmendpoints.json
2024-06-22 07:04:39 (12604): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 18:44 pilot3
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas 344181970 Jun 22 05:03 HITS.38921013._051868.pool.root.1
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas      1024 Jun 22 05:03 memory_monitor_summary.json
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas         0 Jun 22 05:03 agis_ddmendpoints.agis.ALL.json
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas    516872 Jun 22 05:03 log.38921013._051868.job.log.tgz.1
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas        95 Jun 22 05:03 pilot_heartbeat.json
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas      7706 Jun 22 05:04 heartbeat.json
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 22 05:04 pilotlog.txt
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas   3225319 Jun 22 05:04 log.38921013._051868.job.log.1
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas       357 Jun 22 05:04 output.list
2024-06-22 07:04:39 (12604): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 22 05:04 runtime_log
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas   3758080 Jun 22 05:04 result.tar.gz
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas       651 Jun 22 05:04 t9FKDmtCte5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmG7XKDmTLbjIm.diag
2024-06-22 07:04:39 (12604): Guest Log: -rw-r--r--. 1 atlas atlas     10937 Jun 22 05:04 runtime_log.err
2024-06-22 07:04:39 (12604): Guest Log: Looking for outputfile HITS.38921013._051868.pool.root.1
2024-06-22 07:04:39 (12604): Guest Log: HITS file was successfully produced
2024-06-22 07:04:39 (12604): Guest Log: -rw-------. 1 atlas atlas 344181970 Jun 22 05:03 /home/atlas/RunAtlas/HITS.38921013._051868.pool.root.1
2024-06-22 07:04:41 (12604): Guest Log: Successfully finished the ATLAS job!
2024-06-22 07:04:41 (12604): Guest Log: Copying the results back to the shared directory!
2024-06-22 07:04:41 (12604): Guest Log:  *** Contents of shared directory: ***
2024-06-22 07:04:41 (12604): Guest Log: total 868312
2024-06-22 07:04:41 (12604): Guest Log: -rwxrwxrwx. 1 root root 540691835 Jun 21 18:41 ATLAS.root_0
2024-06-22 07:04:41 (12604): Guest Log: -rwxrwxrwx. 1 root root 344181970 Jun 22  2024 HITS.pool.root.1
2024-06-22 07:04:41 (12604): Guest Log: -rwxrwxrwx. 1 root root      9334 Jun 21 18:41 init_data.xml
2024-06-22 07:04:41 (12604): Guest Log: -rwxrwxrwx. 1 root root    482535 Jun 21 18:27 input.tar.gz
2024-06-22 07:04:41 (12604): Guest Log: -rwxrwxrwx. 1 root root   3758080 Jun 22  2024 result.tar.gz
2024-06-22 07:04:41 (12604): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 21 18:27 start_atlas.sh
2024-06-22 07:04:41 (12604): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-22 07:04:41 (12604): VM Completion File Detected.
2024-06-22 07:04:41 (12604): Powering off VM.
2024-06-22 07:04:42 (12604): Successfully stopped VM.
2024-06-22 07:04:42 (12604): Deregistering VM. (boinc_a656ff88fe16ae77, slot#0)
2024-06-22 07:04:42 (12604): Removing network bandwidth throttle group from VM.
2024-06-22 07:04:42 (12604): Removing VM from VirtualBox.
07:04:47 (12604): called boinc_finish(0)

</stderr_txt>
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