Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-22 00:17:56 (749294): Detected: vboxwrapper 26206
2024-06-22 00:17:56 (749294): Detected: BOINC client v8.0.3
2024-06-22 00:17:56 (749294): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2024-06-22 00:17:57 (749294): Successfully copied 'init_data.xml' to the shared directory.
2024-06-22 00:17:57 (749294): Create VM. (boinc_80fb2ad347fad1ec, slot#1)
2024-06-22 00:17:57 (749294): Setting Memory Size for VM. (4096MB)
2024-06-22 00:17:57 (749294): Setting CPU Count for VM. (1)
2024-06-22 00:17:57 (749294): Setting Chipset Options for VM.
2024-06-22 00:17:57 (749294): Setting Graphics Controller Options for VM.
2024-06-22 00:17:57 (749294): Setting Boot Options for VM.
2024-06-22 00:17:57 (749294): Setting Network Configuration for NAT.
2024-06-22 00:17:57 (749294): Enabling VM Network Access.
2024-06-22 00:17:58 (749294): Disabling USB Support for VM.
2024-06-22 00:17:58 (749294): Disabling COM Port Support for VM.
2024-06-22 00:17:58 (749294): Disabling LPT Port Support for VM.
2024-06-22 00:17:58 (749294): Disabling Audio Support for VM.
2024-06-22 00:17:58 (749294): Disabling Clipboard Support for VM.
2024-06-22 00:17:58 (749294): Disabling Drag and Drop Support for VM.
2024-06-22 00:17:58 (749294): Adding storage controller(s) to VM.
2024-06-22 00:17:58 (749294): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-22 00:17:58 (749294): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-22 00:17:58 (749294): forwarding host port 37755 to guest port 80
2024-06-22 00:17:59 (749294): Enabling remote desktop for VM.
2024-06-22 00:17:59 (749294): Enabling shared directory for VM.
2024-06-22 00:17:59 (749294): Starting VM using VBoxManage interface. (boinc_80fb2ad347fad1ec, slot#1)
2024-06-22 00:18:00 (749294): Successfully started VM. (PID = '749682')
2024-06-22 00:18:00 (749294): Reporting VM Process ID to BOINC.
2024-06-22 00:18:00 (749294): Guest Log: BIOS: VirtualBox 7.0.16
2024-06-22 00:18:00 (749294): Guest Log: CPUID EDX: 0x178bfbff
2024-06-22 00:18:00 (749294): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-22 00:18:00 (749294): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-22 00:18:00 (749294): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-22 00:18:00 (749294): Detected: Web Application Enabled (http://localhost:37755)
2024-06-22 00:18:00 (749294): Detected: Remote Desktop Enabled (localhost:57883)
2024-06-22 00:18:00 (749294): Preference change detected
2024-06-22 00:18:00 (749294): Setting CPU throttle for VM. (100%)
2024-06-22 00:18:00 (749294): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-22 00:18:02 (749294): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-22 00:18:02 (749294): Guest Log: BIOS: Booting from Hard Disk...
2024-06-22 00:18:05 (749294): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-22 00:18:05 (749294): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-22 00:18:05 (749294): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-22 00:18:11 (749294): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-22 00:18:11 (749294): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-22 00:18:23 (749294): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000282 main     Log opened 2024-06-21T22:18:21.758899000Z
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000484 main     OS Product: Linux
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000564 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000630 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000697 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000698 main     Process ID: 1234
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.000699 main     Package type: LINUX_64BITS_GENERIC
2024-06-22 00:18:23 (749294): Guest Log: 00:00:00.003120 main     5.2.32 r132073 started. Verbose level = 0
2024-06-22 00:18:23 (749294): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-22 00:18:23 (749294): Guest Log: [INFO] Mounting shared directory
2024-06-22 00:18:23 (749294): Guest Log: [INFO] Checking for init_data.xml
2024-06-22 00:18:27 (749294): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-22 00:18:27 (749294): Guest Log: [INFO] Detected branch: prod
2024-06-22 00:18:27 (749294): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-22 00:18:27 (749294): Guest Log: Copying input files
2024-06-22 00:18:32 (749294): Guest Log: Copied input files into RunAtlas.
2024-06-22 00:18:32 (749294): Guest Log: Detected user-configured HTTP proxy at http://localhost:3128 - will set in /etc/cvmfs/default.local
2024-06-22 00:18:55 (749294): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-22 00:18:55 (749294): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-22 00:18:55 (749294): Guest Log: 2.6.3.0 1503 0 29524 134146 3 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2024-06-22 00:18:56 (749294): Guest Log: copied the webapp to /var/www
2024-06-22 00:18:56 (749294): Guest Log: core_number=1
2024-06-22 00:18:56 (749294): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-22 00:18:56 (749294): Guest Log:  *** Starting ATLAS job. (PandaID=6239737932 taskID=38920995) ***
2024-06-22 01:57:01 (749294): Status Report: Elapsed Time: '6000.000000'
2024-06-22 01:57:01 (749294): Status Report: CPU Time: '5276.070000'
2024-06-22 03:36:01 (749294): Status Report: Elapsed Time: '12000.000000'
2024-06-22 03:36:01 (749294): Status Report: CPU Time: '11205.040000'
2024-06-22 05:15:02 (749294): Status Report: Elapsed Time: '18000.000000'
2024-06-22 05:15:02 (749294): Status Report: CPU Time: '17152.550000'
2024-06-22 06:54:03 (749294): Status Report: Elapsed Time: '24000.000000'
2024-06-22 06:54:03 (749294): Status Report: CPU Time: '23101.190000'
2024-06-22 08:33:03 (749294): Status Report: Elapsed Time: '30000.000000'
2024-06-22 08:33:03 (749294): Status Report: CPU Time: '29044.080000'
2024-06-22 10:12:04 (749294): Status Report: Elapsed Time: '36000.000000'
2024-06-22 10:12:04 (749294): Status Report: CPU Time: '34991.810000'
2024-06-22 11:51:04 (749294): Status Report: Elapsed Time: '42000.000000'
2024-06-22 11:51:04 (749294): Status Report: CPU Time: '40940.290000'
2024-06-22 13:30:05 (749294): Status Report: Elapsed Time: '48000.000000'
2024-06-22 13:30:05 (749294): Status Report: CPU Time: '46877.850000'
2024-06-22 15:09:06 (749294): Status Report: Elapsed Time: '54000.000000'
2024-06-22 15:09:06 (749294): Status Report: CPU Time: '52825.640000'
2024-06-22 16:48:06 (749294): Status Report: Elapsed Time: '60000.000000'
2024-06-22 16:48:06 (749294): Status Report: CPU Time: '58764.370000'
2024-06-22 18:27:07 (749294): Status Report: Elapsed Time: '66000.000000'
2024-06-22 18:27:07 (749294): Status Report: CPU Time: '64712.740000'
2024-06-22 20:06:07 (749294): Status Report: Elapsed Time: '72000.000000'
2024-06-22 20:06:07 (749294): Status Report: CPU Time: '70660.510000'
2024-06-22 21:45:08 (749294): Status Report: Elapsed Time: '78000.000000'
2024-06-22 21:45:08 (749294): Status Report: CPU Time: '76608.230000'
2024-06-22 23:24:09 (749294): Status Report: Elapsed Time: '84000.000000'
2024-06-22 23:24:09 (749294): Status Report: CPU Time: '82556.580000'
2024-06-23 01:03:09 (749294): Status Report: Elapsed Time: '90000.000000'
2024-06-23 01:03:09 (749294): Status Report: CPU Time: '88504.340000'
2024-06-23 02:35:15 (749294): Guest Log:  *** Job finished ***
2024-06-23 02:35:15 (749294): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:04,168 | INFO     | [data] queue_monitor thread has finished
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:07,453 | INFO     | job.realtimelogging is not enabled
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:08,454 | INFO     | [payload] run_realtimelog thread has finished
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:09,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636357453632)>', '<ExcThread(monitor, started 140635910678272)>']
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:09,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:09,883 | INFO     | [monitor] control thread has ended
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,049 | INFO     | all workflow threads have been joined
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,049 | INFO     | end of generic workflow (traces error code: 0)
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,050 | INFO     | traces error code: 0
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,169 [wrapper] ==== pilot stdout END ====
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,175 [wrapper] ==== wrapper stdout RESUME ====
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,179 [wrapper] pilotpid: 6344
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,185 [wrapper] Pilot exit status: 0
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,343 [wrapper] pandaids: 6239737932
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,381 [wrapper] cleanup supervisor_pilot 24020 6345
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,386 [wrapper] Test setup, not cleaning
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,391 [wrapper] ==== wrapper stdout END ====
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,396 [wrapper] ==== wrapper stderr END ====
2024-06-23 02:35:15 (749294): Guest Log: 2024-06-23 00:35:14,406 [wrapper] apfmon messages muted
2024-06-23 02:35:15 (749294): Guest Log:  *** Error codes and diagnostics ***
2024-06-23 02:35:15 (749294): Guest Log:     "exeErrorCode": 0,
2024-06-23 02:35:15 (749294): Guest Log:     "exeErrorDiag": "",
2024-06-23 02:35:15 (749294): Guest Log:     "pilotErrorCode": 0,
2024-06-23 02:35:15 (749294): Guest Log:     "pilotErrorDiag": "",
2024-06-23 02:35:15 (749294): Guest Log:  *** Listing of results directory ***
2024-06-23 02:35:15 (749294): Guest Log: total 376304
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 12:42 pilot3.tar.gz
2024-06-23 02:35:15 (749294): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 13:10 runpilot2-wrapper.sh
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 13:10 queuedata.json
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas      9682 Jun 21 22:18 init_data.xml
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas    482527 Jun 21 22:18 input.tar.gz
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 21 22:18 start_atlas.sh
2024-06-23 02:35:15 (749294): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 22:18 EVNT.38776180._000701.pool.root.1 -> /data/./ATLAS.root_0
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas      2614 Jun 21 22:18 pandaJob.out
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas       456 Jun 21 22:19 setup.sh.local
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas   1025632 Jun 21 22:20 agis_schedconf.cvmfs.json
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 21 22:20 cric_ddmendpoints.json
2024-06-23 02:35:15 (749294): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 22:20 pilot3
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas 348911748 Jun 23 00:33 HITS.38920995._057491.pool.root.1
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas        95 Jun 23 00:34 pilot_heartbeat.json
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas      1021 Jun 23 00:34 memory_monitor_summary.json
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas         0 Jun 23 00:34 agis_ddmendpoints.agis.ALL.json
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas   1681655 Jun 23 00:34 log.38920995._057491.job.log.tgz.1
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas      7719 Jun 23 00:34 heartbeat.json
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas      4466 Jun 23 00:35 pilotlog.txt
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas  14792150 Jun 23 00:35 log.38920995._057491.job.log.1
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas       357 Jun 23 00:35 output.list
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 23 00:35 runtime_log
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas  16496640 Jun 23 00:35 result.tar.gz
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 atlas atlas     11143 Jun 23 00:35 runtime_log.err
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas       647 Jun 23 00:35 RaDODmsCte5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm96XKDm4IafQo.diag
2024-06-23 02:35:15 (749294): Guest Log: Looking for outputfile HITS.38920995._057491.pool.root.1
2024-06-23 02:35:15 (749294): Guest Log: HITS file was successfully produced
2024-06-23 02:35:15 (749294): Guest Log: -rw-------. 1 atlas atlas 348911748 Jun 23 00:33 /home/atlas/RunAtlas/HITS.38920995._057491.pool.root.1
2024-06-23 02:35:15 (749294): Guest Log: Successfully finished the ATLAS job!
2024-06-23 02:35:15 (749294): Guest Log: Copying the results back to the shared directory!
2024-06-23 02:35:15 (749294): Guest Log:  *** Contents of shared directory: ***
2024-06-23 02:35:15 (749294): Guest Log: total 632624
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 root root 630786164 Jun 21 22:17 ATLAS.root_0
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 root root      9682 Jun 21 22:17 init_data.xml
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 root root    482527 Jun 21 22:17 input.tar.gz
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 root root  16496640 Jun 23  2024 result.tar.gz
2024-06-23 02:35:15 (749294): Guest Log: -rw-r--r--. 1 root root     17537 Jun 21 22:17 start_atlas.sh
2024-06-23 02:35:15 (749294): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-23 02:35:15 (749294): VM Completion File Detected.
2024-06-23 02:35:15 (749294): Powering off VM.
2024-06-23 02:35:16 (749294): Successfully stopped VM.
2024-06-23 02:35:16 (749294): Deregistering VM. (boinc_80fb2ad347fad1ec, slot#1)
2024-06-23 02:35:16 (749294): Removing network bandwidth throttle group from VM.
2024-06-23 02:35:16 (749294): Removing VM from VirtualBox.
02:35:21 (749294): called boinc_finish(0)

</stderr_txt>
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