Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:47:04 (2636694): wrapper (7.7.26015): starting
17:47:04 (2636694): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 17:47:04] Arguments: --nthreads 4
[2024-06-23 17:47:04] Threads: 4
[2024-06-23 17:47:04] Checking for CVMFS
[2024-06-23 17:47:04] No cvmfs_config command found, will try listing directly
[2024-06-23 17:47:04] CVMFS is ok
[2024-06-23 17:47:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 17:47:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 17:47:04] Further information can be found at the LHC@home message board.
[2024-06-23 17:47:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 17:47:04] Checking for apptainer binary...
[2024-06-23 17:47:04] which: no apptainer in ((null))
[2024-06-23 17:47:04] apptainer is not installed, using version from CVMFS
[2024-06-23 17:47:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 17:47:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-06-23 17:47:05] apptainer works
[2024-06-23 17:47:05] Set ATHENA_PROC_NUMBER=4
[2024-06-23 17:47:05] Set ATHENA_CORE_NUMBER=4
[2024-06-23 17:47:05] Starting ATLAS job with PandaID=6239686477
[2024-06-23 17:47:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-24 05:58:25]  *** The last 200 lines of the pilot log: ***
[2024-06-24 05:58:25] 2024-06-24 03:58:09,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-24 05:58:25] 2024-06-24 03:58:09,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-24 05:58:25] 2024-06-24 03:58:09,589 | INFO     | fitting pss+swap vs Time
[2024-06-24 05:58:25] 2024-06-24 03:58:09,591 | INFO     | model: linear, x: [1719157740.0, 1719157801.0, 1719157862.0, 1719157923.0, 1719157984.0, 1719158045.0, 1719158106.0, 1719158167.0, 1719158228.0, 1719158289.0, 1719
[2024-06-24 05:58:25] 2024-06-24 03:58:09,591 | INFO     | sum of square deviations: 114297056518.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,606 | INFO     | sum of deviations: 329984938271.9999
[2024-06-24 05:58:25] 2024-06-24 03:58:09,607 | INFO     | mean x: 1719179578.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,607 | INFO     | mean y: 2369235.9874476986
[2024-06-24 05:58:25] 2024-06-24 03:58:09,607 | INFO     | -- intersect: -4961042633.11411
[2024-06-24 05:58:25] 2024-06-24 03:58:09,607 | INFO     | intersect: -4961042633.11411
[2024-06-24 05:58:25] 2024-06-24 03:58:09,608 | INFO     | chi2: 4.156771020135865
[2024-06-24 05:58:25] 2024-06-24 03:58:09,609 | INFO     | model: linear, x: [1719157740.0, 1719157801.0, 1719157862.0, 1719157923.0, 1719157984.0, 1719158045.0, 1719158106.0, 1719158167.0, 1719158228.0, 1719158289.0, 1719
[2024-06-24 05:58:25] 2024-06-24 03:58:09,610 | INFO     | sum of square deviations: 111922537578.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,626 | INFO     | sum of deviations: 374764867990.50006
[2024-06-24 05:58:25] 2024-06-24 03:58:09,626 | INFO     | mean x: 1719179425.5
[2024-06-24 05:58:25] 2024-06-24 03:58:09,626 | INFO     | mean y: 2372094.757022472
[2024-06-24 05:58:25] 2024-06-24 03:58:09,627 | INFO     | -- intersect: -5754181182.106273
[2024-06-24 05:58:25] 2024-06-24 03:58:09,627 | INFO     | intersect: -5754181182.106273
[2024-06-24 05:58:25] 2024-06-24 03:58:09,628 | INFO     | chi2: 3.3294077677317127
[2024-06-24 05:58:25] 2024-06-24 03:58:09,628 | INFO     | current chi2=3.3294077677317127 (change=19.90398913955838 %)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,628 | INFO     | right removable region: 711
[2024-06-24 05:58:25] 2024-06-24 03:58:09,629 | INFO     | model: linear, x: [1719158045.0, 1719158106.0, 1719158167.0, 1719158228.0, 1719158289.0, 1719158350.0, 1719158411.0, 1719158472.0, 1719158533.0, 1719158594.0, 1719
[2024-06-24 05:58:25] 2024-06-24 03:58:09,630 | INFO     | sum of square deviations: 111922537578.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,647 | INFO     | sum of deviations: 169246834531.00006
[2024-06-24 05:58:25] 2024-06-24 03:58:09,647 | INFO     | mean x: 1719179730.5
[2024-06-24 05:58:25] 2024-06-24 03:58:09,647 | INFO     | mean y: 2379547.9775280897
[2024-06-24 05:58:25] 2024-06-24 03:58:09,647 | INFO     | -- intersect: -2597326763.847342
[2024-06-24 05:58:25] 2024-06-24 03:58:09,647 | INFO     | intersect: -2597326763.847342
[2024-06-24 05:58:25] 2024-06-24 03:58:09,649 | INFO     | chi2: 2.017331235094825
[2024-06-24 05:58:25] 2024-06-24 03:58:09,649 | INFO     | current chi2=2.017331235094825 (change=51.46879091192067 %)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,650 | INFO     | model: linear, x: [1719158350.0, 1719158411.0, 1719158472.0, 1719158533.0, 1719158594.0, 1719158655.0, 1719158716.0, 1719158777.0, 1719158838.0, 1719158899.0, 1719
[2024-06-24 05:58:25] 2024-06-24 03:58:09,650 | INFO     | sum of square deviations: 109581135538.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,666 | INFO     | sum of deviations: 50788598963.00001
[2024-06-24 05:58:25] 2024-06-24 03:58:09,667 | INFO     | mean x: 1719179883.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,667 | INFO     | mean y: 2387263.2220650637
[2024-06-24 05:58:25] 2024-06-24 03:58:09,667 | INFO     | -- intersect: -794417197.6394095
[2024-06-24 05:58:25] 2024-06-24 03:58:09,667 | INFO     | intersect: -794417197.6394095
[2024-06-24 05:58:25] 2024-06-24 03:58:09,668 | INFO     | chi2: 0.9792255561230018
[2024-06-24 05:58:25] 2024-06-24 03:58:09,669 | INFO     | current chi2=0.9792255561230018 (change=51.459356842954286 %)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,669 | INFO     | model: linear, x: [1719158655.0, 1719158716.0, 1719158777.0, 1719158838.0, 1719158899.0, 1719158960.0, 1719159021.0, 1719159082.0, 1719159143.0, 1719159204.0, 1719
[2024-06-24 05:58:25] 2024-06-24 03:58:09,670 | INFO     | sum of square deviations: 107272617835.5
[2024-06-24 05:58:25] 2024-06-24 03:58:09,685 | INFO     | sum of deviations: 40585755616.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,685 | INFO     | mean x: 1719180035.5
[2024-06-24 05:58:25] 2024-06-24 03:58:09,685 | INFO     | mean y: 2387932.638176638
[2024-06-24 05:58:25] 2024-06-24 03:58:09,685 | INFO     | -- intersect: -648050382.2699791
[2024-06-24 05:58:25] 2024-06-24 03:58:09,686 | INFO     | intersect: -648050382.2699791
[2024-06-24 05:58:25] 2024-06-24 03:58:09,687 | INFO     | chi2: 0.9447161155551842
[2024-06-24 05:58:25] 2024-06-24 03:58:09,687 | INFO     | current chi2=0.9447161155551842 (change=3.524156447105921 %)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,687 | INFO     | left removable region: 30
[2024-06-24 05:58:25] 2024-06-24 03:58:09,688 | INFO     | model: linear, x: [1719159570.0, 1719159631.0, 1719159692.0, 1719159753.0, 1719159814.0, 1719159875.0, 1719159936.0, 1719159997.0, 1719160058.0, 1719160119.0, 1719
[2024-06-24 05:58:25] 2024-06-24 03:58:09,689 | INFO     | sum of square deviations: 97930691980.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,702 | INFO     | sum of deviations: 123214913453.99998
[2024-06-24 05:58:25] 2024-06-24 03:58:09,703 | INFO     | mean x: 1719180310.0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,703 | INFO     | mean y: 2388439.9089574157
[2024-06-24 05:58:25] 2024-06-24 03:58:09,703 | INFO     | -- intersect: -2160658188.5344706
[2024-06-24 05:58:25] 2024-06-24 03:58:09,703 | INFO     | intersect: -2160658188.5344706
[2024-06-24 05:58:25] 2024-06-24 03:58:09,704 | INFO     | chi2: 0.010033974464755617
[2024-06-24 05:58:25] 2024-06-24 03:58:09,704 | INFO     | -- intersect: -2160658188.5344706
[2024-06-24 05:58:25] 2024-06-24 03:58:09,704 | INFO     | current memory leak: 1.26 B/s (using 681 data points, chi2=0.01)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | ..............................
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . Timing measurements:
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . get job = 0 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . initial setup = 1 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . payload setup = 23 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . stage-in = 0 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . payload execution = 43737 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,706 | INFO     | . stage-out = 1 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,707 | INFO     | . log creation = 0 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,707 | INFO     | ..............................
[2024-06-24 05:58:25] 2024-06-24 03:58:09,827 | INFO     | 
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | job summary report
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | --------------------------------------------------
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | PanDA job id: 6239686477
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | task id: 38921001
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | errors: (none)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-24 05:58:25] 2024-06-24 03:58:09,828 | INFO     | pilot state: finished 
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | transexitcode: 0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | exeerrorcode: 0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | exeerrordiag: 
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | exitcode: 0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | exitmsg: OK
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | cpuconsumptiontime: 167673 s
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | nevents: 400
[2024-06-24 05:58:25] 2024-06-24 03:58:09,829 | INFO     | neventsw: 0
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | pid: 2648139
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | pgrp: 2648139
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | corecount: 4
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | event service: False
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | sizes: {0: 2386972, 1: 2387171, 12: 2387171, 16: 2387405, 22: 2387433, 43765: 2431420, 43766: 2431547, 43769: 2440585, 43772: 2440641, 43791: 2440811}
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | --------------------------------------------------
[2024-06-24 05:58:25] 2024-06-24 03:58:09,830 | INFO     | 
[2024-06-24 05:58:25] 2024-06-24 03:58:09,831 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-24 05:58:25] 2024-06-24 03:58:09,857 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,857 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,858 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,858 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,860 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,860 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,860 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,860 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-24 05:58:25] 2024-06-24 03:58:09,860 | INFO     | job 6239686477 has completed (purged errors)
[2024-06-24 05:58:25] 2024-06-24 03:58:09,861 | INFO     | overall cleanup function is called
[2024-06-24 05:58:25] 2024-06-24 03:58:10,868 | INFO     | --- collectZombieJob: --- 10, [2648139]
[2024-06-24 05:58:25] 2024-06-24 03:58:10,869 | INFO     | zombie collector waiting for pid 2648139
[2024-06-24 05:58:25] 2024-06-24 03:58:10,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-24 05:58:25] 2024-06-24 03:58:11,873 | INFO     | collected zombie processes
[2024-06-24 05:58:25] 2024-06-24 03:58:11,874 | INFO     | will now attempt to kill all subprocesses of pid=2648139
[2024-06-24 05:58:25] 2024-06-24 03:58:12,053 | INFO     | process IDs to be killed: [2648139] (in reverse order)
[2024-06-24 05:58:25] 2024-06-24 03:58:12,147 | WARNING  | found no corresponding commands to process id(s)
[2024-06-24 05:58:25] 2024-06-24 03:58:12,147 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-24 05:58:25] 2024-06-24 03:58:12,154 | INFO     | did not find any defunct processes belonging to 2648139
[2024-06-24 05:58:25] 2024-06-24 03:58:12,159 | INFO     | did not find any defunct processes belonging to 2648139
[2024-06-24 05:58:25] 2024-06-24 03:58:12,160 | INFO     | ready for new job
[2024-06-24 05:58:25] 2024-06-24 03:58:12,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-24 05:58:25] 2024-06-24 03:58:12,163 | INFO     | *************************************
[2024-06-24 05:58:25] 2024-06-24 03:58:12,163 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-24 05:58:25] 2024-06-24 03:58:12,163 | INFO     | *************************************
[2024-06-24 05:58:25] 2024-06-24 03:58:12,164 | INFO     | 
[2024-06-24 05:58:25] 2024-06-24 03:58:12,166 | INFO     | architecture information:
[2024-06-24 05:58:25] 2024-06-24 03:58:12,166 | INFO     | executing command: cat /etc/os-release
[2024-06-24 05:58:25] 2024-06-24 03:58:12,181 | INFO     | cat /etc/os-release:
[2024-06-24 05:58:25] NAME="CentOS Linux"
[2024-06-24 05:58:25] VERSION="7 (Core)"
[2024-06-24 05:58:25] ID="centos"
[2024-06-24 05:58:25] ID_LIKE="rhel fedora"
[2024-06-24 05:58:25] VERSION_ID="7"
[2024-06-24 05:58:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-24 05:58:25] ANSI_COLOR="0;31"
[2024-06-24 05:58:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-24 05:58:25] HOME_URL="https://www.centos.org/"
[2024-06-24 05:58:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-24 05:58:25] 
[2024-06-24 05:58:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-24 05:58:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-24 05:58:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-24 05:58:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-24 05:58:25] 
[2024-06-24 05:58:25] 2024-06-24 03:58:12,181 | INFO     | *************************************
[2024-06-24 05:58:25] 2024-06-24 03:58:12,684 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-24 05:58:25] 2024-06-24 03:58:12,702 | INFO     | sufficient remaining disk space (1672396931072 B)
[2024-06-24 05:58:25] 2024-06-24 03:58:12,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-24 05:58:25] 2024-06-24 03:58:12,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-24 05:58:25] 2024-06-24 03:58:12,703 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-24 05:58:25] 2024-06-24 03:58:12,703 | INFO     | found 0 job(s) in 20 queues
[2024-06-24 05:58:25] 2024-06-24 03:58:12,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-24 05:58:25] 2024-06-24 03:58:12,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-24 05:58:25] 2024-06-24 03:58:12,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-24 05:58:25] 2024-06-24 03:58:12,903 | INFO     | aborting loop
[2024-06-24 05:58:25] 2024-06-24 03:58:12,977 | INFO     | all data control threads have been joined
[2024-06-24 05:58:25] 2024-06-24 03:58:13,245 | INFO     | all payload control threads have been joined
[2024-06-24 05:58:25] 2024-06-24 03:58:13,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-24 05:58:25] 2024-06-24 03:58:13,668 | INFO     | all job control threads have been joined
[2024-06-24 05:58:25] 2024-06-24 03:58:13,708 | INFO     | [job] retrieve thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:13,779 | INFO     | [data] copytool_in thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:13,908 | INFO     | [job] job monitor thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:13,982 | INFO     | [job] create_data_payload thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:13,982 | INFO     | [data] control thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:13,995 | INFO     | [payload] validate_pre thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,087 | INFO     | [payload] failed_post thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,250 | INFO     | [payload] control thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,398 | INFO     | [payload] validate_post thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,506 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,674 | INFO     | [job] control thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-24 05:58:25] 2024-06-24 03:58:14,878 | INFO     | [job] validate thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:14,977 | INFO     | [payload] execute_payloads thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:15,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-24 05:58:25] 2024-06-24 03:58:15,328 | INFO     | [data] copytool_out thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:15,843 | INFO     | [job] queue monitor thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:19,073 | INFO     | [data] queue_monitor thread has finished
[2024-06-24 05:58:25] 2024-06-24 03:58:19,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47983623476288)>', '<ExcThread(monitor, started 47983805851392)>']
[2024-06-24 05:58:25] 2024-06-24 03:58:19,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-24 05:58:25] 2024-06-24 03:58:19,740 | INFO     | [monitor] control thread has ended
[2024-06-24 05:58:25] 2024-06-24 03:58:24,302 | INFO     | all workflow threads have been joined
[2024-06-24 05:58:25] 2024-06-24 03:58:24,303 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-24 05:58:25] 2024-06-24 03:58:24,303 | INFO     | traces error code: 0
[2024-06-24 05:58:25] 2024-06-24 03:58:24,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-24 05:58:25] 2024-06-24 03:58:24,422 [wrapper] ==== pilot stdout END ====
[2024-06-24 05:58:25] 2024-06-24 03:58:24,429 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-24 05:58:25] 2024-06-24 03:58:24,434 [wrapper] pilotpid: 2641091
[2024-06-24 05:58:25] 2024-06-24 03:58:24,443 [wrapper] Pilot exit status: 0
[2024-06-24 05:58:25] 2024-06-24 03:58:24,490 [wrapper] pandaids: 6239686477
[2024-06-24 05:58:25] 2024-06-24 03:58:24,549 [wrapper] cleanup supervisor_pilot 3623013 2641092
[2024-06-24 05:58:25] 2024-06-24 03:58:24,551 [wrapper] Test setup, not cleaning
[2024-06-24 05:58:25] 2024-06-24 03:58:24,553 [wrapper] ==== wrapper stdout END ====
[2024-06-24 05:58:25] 2024-06-24 03:58:24,555 [wrapper] ==== wrapper stderr END ====
[2024-06-24 05:58:25] 2024-06-24 03:58:24,563 [wrapper] apfmon messages muted
[2024-06-24 05:58:25]  *** Error codes and diagnostics ***
[2024-06-24 05:58:25]     "exeErrorCode": 0,
[2024-06-24 05:58:25]     "exeErrorDiag": "",
[2024-06-24 05:58:25]     "pilotErrorCode": 0,
[2024-06-24 05:58:25]     "pilotErrorDiag": "",
[2024-06-24 05:58:25]  *** Listing of results directory ***
[2024-06-24 05:58:25] total 967204
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc    469766 Jun 21 14:26 pilot3.tar.gz
[2024-06-24 05:58:25] -rwx------ 1 boinc boinc     32308 Jun 21 14:30 runpilot2-wrapper.sh
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc      5654 Jun 21 14:30 queuedata.json
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc       100 Jun 23 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-24 05:58:25] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 17:46 run_atlas
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc       105 Jun 23 17:46 job.xml
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc      6454 Jun 23 17:47 init_data.xml
[2024-06-24 05:58:25] -rw-r--r-- 2 boinc boinc 613458217 Jun 23 17:47 EVNT.38776190._000658.pool.root.1
[2024-06-24 05:58:25] -rw-r--r-- 2 boinc boinc     17537 Jun 23 17:47 start_atlas.sh
[2024-06-24 05:58:25] drwxrwx--x 2 boinc boinc      4096 Jun 23 17:47 shared
[2024-06-24 05:58:25] -rw-r--r-- 2 boinc boinc    482538 Jun 23 17:47 input.tar.gz
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc         0 Jun 23 17:47 boinc_lockfile
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc      2654 Jun 23 17:47 pandaJob.out
[2024-06-24 05:58:25] -rw------- 1 boinc boinc       424 Jun 23 17:47 setup.sh.local
[2024-06-24 05:58:25] -rw------- 1 boinc boinc   1025352 Jun 23 17:47 agis_schedconf.cvmfs.json
[2024-06-24 05:58:25] -rw------- 1 boinc boinc   1321363 Jun 23 17:47 cric_ddmendpoints.json
[2024-06-24 05:58:25] drwx------ 4 boinc boinc      4096 Jun 23 17:47 pilot3
[2024-06-24 05:58:25] -rw------- 1 boinc boinc 361718694 Jun 24 05:56 HITS.38921001._063892.pool.root.1
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc       533 Jun 24 05:56 boinc_task_state.xml
[2024-06-24 05:58:25] -rw------- 1 boinc boinc        95 Jun 24 05:57 pilot_heartbeat.json
[2024-06-24 05:58:25] -rw------- 1 boinc boinc      1053 Jun 24 05:57 memory_monitor_summary.json
[2024-06-24 05:58:25] -rw------- 1 boinc boinc         0 Jun 24 05:57 agis_ddmendpoints.agis.ALL.json
[2024-06-24 05:58:25] -rw------- 1 boinc boinc    678132 Jun 24 05:57 log.38921001._063892.job.log.tgz.1
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc      8192 Jun 24 05:58 boinc_mmap_file
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc        29 Jun 24 05:58 wrapper_checkpoint.txt
[2024-06-24 05:58:25] -rw------- 1 boinc boinc      7767 Jun 24 05:58 heartbeat.json
[2024-06-24 05:58:25] -rw------- 1 boinc boinc      4345 Jun 24 05:58 pilotlog.txt
[2024-06-24 05:58:25] -rw------- 1 boinc boinc   5169393 Jun 24 05:58 log.38921001._063892.job.log.1
[2024-06-24 05:58:25] -rw------- 1 boinc boinc       357 Jun 24 05:58 output.list
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc       620 Jun 24 05:58 runtime_log
[2024-06-24 05:58:25] -rw------- 1 boinc boinc   5867520 Jun 24 05:58 result.tar.gz
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc     11410 Jun 24 05:58 runtime_log.err
[2024-06-24 05:58:25] -rw------- 1 boinc boinc       660 Jun 24 05:58 dCILDmiase5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm34XKDmSqPSFm.diag
[2024-06-24 05:58:25] -rw-r--r-- 1 boinc boinc     21382 Jun 24 05:58 stderr.txt
[2024-06-24 05:58:25] HITS file was successfully produced:
[2024-06-24 05:58:25] -rw------- 1 boinc boinc 361718694 Jun 24 05:56 shared/HITS.pool.root.1
[2024-06-24 05:58:25]  *** Contents of shared directory: ***
[2024-06-24 05:58:25] total 958560
[2024-06-24 05:58:25] -rw-r--r-- 2 boinc boinc 613458217 Jun 23 17:47 ATLAS.root_0
[2024-06-24 05:58:25] -rw-r--r-- 2 boinc boinc     17537 Jun 23 17:47 start_atlas.sh
[2024-06-24 05:58:25] -rw-r--r-- 2 boinc boinc    482538 Jun 23 17:47 input.tar.gz
[2024-06-24 05:58:25] -rw------- 1 boinc boinc 361718694 Jun 24 05:56 HITS.pool.root.1
[2024-06-24 05:58:25] -rw------- 1 boinc boinc   5867520 Jun 24 05:58 result.tar.gz
05:58:26 (2636694): run_atlas exited; CPU time 167287.399711
05:58:26 (2636694): called boinc_finish(0)

</stderr_txt>
]]>

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