Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:13:18 (845668): wrapper (7.7.26015): starting
03:13:18 (845668): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 03:13:18] Arguments: --nthreads 4
[2024-06-22 03:13:18] Threads: 4
[2024-06-22 03:13:18] Checking for CVMFS
[2024-06-22 03:13:18] No cvmfs_config command found, will try listing directly
[2024-06-22 03:13:18] CVMFS is ok
[2024-06-22 03:13:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 03:13:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 03:13:18] Further information can be found at the LHC@home message board.
[2024-06-22 03:13:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 03:13:18] Checking for apptainer binary...
[2024-06-22 03:13:18] which: no apptainer in ((null))
[2024-06-22 03:13:18] apptainer is not installed, using version from CVMFS
[2024-06-22 03:13:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 03:13:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-06-22 03:13:20] apptainer works
[2024-06-22 03:13:20] Set ATHENA_PROC_NUMBER=4
[2024-06-22 03:13:20] Set ATHENA_CORE_NUMBER=4
[2024-06-22 03:13:20] Starting ATLAS job with PandaID=6239656837
[2024-06-22 03:13:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 07:55:29]  *** The last 200 lines of the pilot log: ***
[2024-06-22 07:55:29] 2024-06-22 05:55:08,219 | INFO     | fitting pss+swap vs Time
[2024-06-22 07:55:29] 2024-06-22 05:55:08,220 | INFO     | model: linear, x: [1719018854.0, 1719018915.0, 1719018976.0, 1719019037.0, 1719019098.0, 1719019159.0, 1719019220.0, 1719019281.0, 1719019342.0, 1719019403.0, 1719
[2024-06-22 07:55:29] 2024-06-22 05:55:08,220 | INFO     | sum of square deviations: 6590404498.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,223 | INFO     | sum of deviations: 107536001652.99997
[2024-06-22 07:55:29] 2024-06-22 05:55:08,224 | INFO     | mean x: 1719027272.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,224 | INFO     | mean y: 2314620.4223826714
[2024-06-22 07:55:29] 2024-06-22 05:55:08,224 | INFO     | -- intersect: -28047150267.422203
[2024-06-22 07:55:29] 2024-06-22 05:55:08,224 | INFO     | intersect: -28047150267.422203
[2024-06-22 07:55:29] 2024-06-22 05:55:08,225 | INFO     | chi2: 4.9908636492694445
[2024-06-22 07:55:29] 2024-06-22 05:55:08,225 | INFO     | model: linear, x: [1719018854.0, 1719018915.0, 1719018976.0, 1719019037.0, 1719019098.0, 1719019159.0, 1719019220.0, 1719019281.0, 1719019342.0, 1719019403.0, 1719
[2024-06-22 07:55:29] 2024-06-22 05:55:08,225 | INFO     | sum of square deviations: 6239923508.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,228 | INFO     | sum of deviations: 122533107761.50002
[2024-06-22 07:55:29] 2024-06-22 05:55:08,228 | INFO     | mean x: 1719027119.5
[2024-06-22 07:55:29] 2024-06-22 05:55:08,228 | INFO     | mean y: 2321036.1727941176
[2024-06-22 07:55:29] 2024-06-22 05:55:08,228 | INFO     | -- intersect: -33754140082.07373
[2024-06-22 07:55:29] 2024-06-22 05:55:08,228 | INFO     | intersect: -33754140082.07373
[2024-06-22 07:55:29] 2024-06-22 05:55:08,229 | INFO     | chi2: 4.254025859398704
[2024-06-22 07:55:29] 2024-06-22 05:55:08,229 | INFO     | current chi2=4.254025859398704 (change=14.763733126201476 %)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,229 | INFO     | right removable region: 271
[2024-06-22 07:55:29] 2024-06-22 05:55:08,229 | INFO     | model: linear, x: [1719019159.0, 1719019220.0, 1719019281.0, 1719019342.0, 1719019403.0, 1719019464.0, 1719019525.0, 1719019586.0, 1719019647.0, 1719019708.0, 1719
[2024-06-22 07:55:29] 2024-06-22 05:55:08,229 | INFO     | sum of square deviations: 6239923508.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,231 | INFO     | sum of deviations: 42608037376.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,232 | INFO     | mean x: 1719027424.5
[2024-06-22 07:55:29] 2024-06-22 05:55:08,232 | INFO     | mean y: 2342809.6838235296
[2024-06-22 07:55:29] 2024-06-22 05:55:08,232 | INFO     | -- intersect: -11735683250.981955
[2024-06-22 07:55:29] 2024-06-22 05:55:08,232 | INFO     | intersect: -11735683250.981955
[2024-06-22 07:55:29] 2024-06-22 05:55:08,232 | INFO     | chi2: 2.5034436236591535
[2024-06-22 07:55:29] 2024-06-22 05:55:08,232 | INFO     | current chi2=2.5034436236591535 (change=49.83947068909398 %)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,233 | INFO     | model: linear, x: [1719019464.0, 1719019525.0, 1719019586.0, 1719019647.0, 1719019708.0, 1719019769.0, 1719019830.0, 1719019891.0, 1719019952.0, 1719020013.0, 1719
[2024-06-22 07:55:29] 2024-06-22 05:55:08,233 | INFO     | sum of square deviations: 5902093918.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,235 | INFO     | sum of deviations: -12345344822.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,235 | INFO     | mean x: 1719027577.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,235 | INFO     | mean y: 2367616.284644195
[2024-06-22 07:55:29] 2024-06-22 05:55:08,235 | INFO     | -- intersect: 3598038659.7206144
[2024-06-22 07:55:29] 2024-06-22 05:55:08,236 | INFO     | intersect: 3598038659.7206144
[2024-06-22 07:55:29] 2024-06-22 05:55:08,236 | INFO     | chi2: 0.8721537376842055
[2024-06-22 07:55:29] 2024-06-22 05:55:08,236 | INFO     | current chi2=0.8721537376842055 (change=65.1618382997807 %)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,237 | INFO     | model: linear, x: [1719019769.0, 1719019830.0, 1719019891.0, 1719019952.0, 1719020013.0, 1719020074.0, 1719020135.0, 1719020196.0, 1719020257.0, 1719020318.0, 1719
[2024-06-22 07:55:29] 2024-06-22 05:55:08,237 | INFO     | sum of square deviations: 5576683165.5
[2024-06-22 07:55:29] 2024-06-22 05:55:08,239 | INFO     | sum of deviations: -21349421353.999947
[2024-06-22 07:55:29] 2024-06-22 05:55:08,239 | INFO     | mean x: 1719027729.5
[2024-06-22 07:55:29] 2024-06-22 05:55:08,239 | INFO     | mean y: 2371794.7862595418
[2024-06-22 07:55:29] 2024-06-22 05:55:08,239 | INFO     | -- intersect: 6583388902.473215
[2024-06-22 07:55:29] 2024-06-22 05:55:08,239 | INFO     | intersect: 6583388902.473215
[2024-06-22 07:55:29] 2024-06-22 05:55:08,240 | INFO     | chi2: 0.7809058544683122
[2024-06-22 07:55:29] 2024-06-22 05:55:08,240 | INFO     | current chi2=0.7809058544683122 (change=10.462362227349972 %)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,240 | INFO     | left removable region: 30
[2024-06-22 07:55:29] 2024-06-22 05:55:08,240 | INFO     | model: linear, x: [1719020684.0, 1719020745.0, 1719020806.0, 1719020867.0, 1719020928.0, 1719020989.0, 1719021050.0, 1719021111.0, 1719021172.0, 1719021233.0, 1719
[2024-06-22 07:55:29] 2024-06-22 05:55:08,241 | INFO     | sum of square deviations: 4340323240.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,243 | INFO     | sum of deviations: -2683314238.0000005
[2024-06-22 07:55:29] 2024-06-22 05:55:08,243 | INFO     | mean x: 1719028004.0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,243 | INFO     | mean y: 2378489.2987551866
[2024-06-22 07:55:29] 2024-06-22 05:55:08,243 | INFO     | -- intersect: 1065131667.7127024
[2024-06-22 07:55:29] 2024-06-22 05:55:08,243 | INFO     | intersect: 1065131667.7127024
[2024-06-22 07:55:29] 2024-06-22 05:55:08,243 | INFO     | chi2: 0.00919753567902562
[2024-06-22 07:55:29] 2024-06-22 05:55:08,244 | INFO     | -- intersect: 1065131667.7127024
[2024-06-22 07:55:29] 2024-06-22 05:55:08,244 | INFO     | current memory leak: -0.62 B/s (using 241 data points, chi2=0.01)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | ..............................
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . Timing measurements:
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . get job = 0 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . initial setup = 1 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . payload setup = 10 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . stage-in = 0 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . payload execution = 16847 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . stage-out = 1 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | . log creation = 0 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,245 | INFO     | ..............................
[2024-06-22 07:55:29] 2024-06-22 05:55:08,384 | WARNING  | process 859296 is no longer using CPU - aborting
[2024-06-22 07:55:29] 2024-06-22 05:55:08,384 | INFO     | aborting job monitoring since job object (job id=6239656837) has expired
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | 
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | job summary report
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | --------------------------------------------------
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | PanDA job id: 6239656837
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | task id: 40024014
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | errors: (none)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | pilot state: finished 
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | transexitcode: 0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,722 | INFO     | exeerrorcode: 0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | exeerrordiag: 
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | exitcode: 0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | exitmsg: OK
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | cpuconsumptiontime: 64111 s
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | nevents: 400
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | neventsw: 0
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | pid: 859296
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | pgrp: 859296
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | corecount: 4
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | event service: False
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | sizes: {0: 2386848, 1: 2386848, 9: 2387082, 11: 2387110, 16862: 2418740, 16863: 2427906, 16872: 2428020}
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | --------------------------------------------------
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | 
[2024-06-22 07:55:29] 2024-06-22 05:55:08,723 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-06-22 07:55:29] 2024-06-22 05:55:08,764 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,764 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,764 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,764 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,765 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,766 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 07:55:29] 2024-06-22 05:55:08,766 | INFO     | job 6239656837 has completed (purged errors)
[2024-06-22 07:55:29] 2024-06-22 05:55:08,766 | INFO     | overall cleanup function is called
[2024-06-22 07:55:29] 2024-06-22 05:55:09,769 | INFO     | --- collectZombieJob: --- 10, [859296]
[2024-06-22 07:55:29] 2024-06-22 05:55:09,769 | INFO     | zombie collector waiting for pid 859296
[2024-06-22 07:55:29] 2024-06-22 05:55:09,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 07:55:29] 2024-06-22 05:55:10,774 | INFO     | collected zombie processes
[2024-06-22 07:55:29] 2024-06-22 05:55:10,774 | INFO     | will now attempt to kill all subprocesses of pid=859296
[2024-06-22 07:55:29] 2024-06-22 05:55:10,963 | INFO     | process IDs to be killed: [859296] (in reverse order)
[2024-06-22 07:55:29] 2024-06-22 05:55:11,091 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 07:55:29] 2024-06-22 05:55:11,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 07:55:29] 2024-06-22 05:55:11,098 | INFO     | did not find any defunct processes belonging to 859296
[2024-06-22 07:55:29] 2024-06-22 05:55:11,104 | INFO     | did not find any defunct processes belonging to 859296
[2024-06-22 07:55:29] 2024-06-22 05:55:11,104 | INFO     | ready for new job
[2024-06-22 07:55:29] 2024-06-22 05:55:11,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 07:55:29] 2024-06-22 05:55:11,105 | INFO     | *************************************
[2024-06-22 07:55:29] 2024-06-22 05:55:11,106 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 07:55:29] 2024-06-22 05:55:11,106 | INFO     | *************************************
[2024-06-22 07:55:29] 2024-06-22 05:55:11,106 | INFO     | 
[2024-06-22 07:55:29] 2024-06-22 05:55:11,108 | INFO     | architecture information:
[2024-06-22 07:55:29] 2024-06-22 05:55:11,109 | INFO     | executing command: cat /etc/os-release
[2024-06-22 07:55:29] 2024-06-22 05:55:11,131 | INFO     | cat /etc/os-release:
[2024-06-22 07:55:29] NAME="CentOS Linux"
[2024-06-22 07:55:29] VERSION="7 (Core)"
[2024-06-22 07:55:29] ID="centos"
[2024-06-22 07:55:29] ID_LIKE="rhel fedora"
[2024-06-22 07:55:29] VERSION_ID="7"
[2024-06-22 07:55:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 07:55:29] ANSI_COLOR="0;31"
[2024-06-22 07:55:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 07:55:29] HOME_URL="https://www.centos.org/"
[2024-06-22 07:55:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 07:55:29] 
[2024-06-22 07:55:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 07:55:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 07:55:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 07:55:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 07:55:29] 
[2024-06-22 07:55:29] 2024-06-22 05:55:11,131 | INFO     | *************************************
[2024-06-22 07:55:29] 2024-06-22 05:55:11,634 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-06-22 07:55:29] 2024-06-22 05:55:11,654 | INFO     | sufficient remaining disk space (654150991872 B)
[2024-06-22 07:55:29] 2024-06-22 05:55:11,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 07:55:29] 2024-06-22 05:55:11,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 07:55:29] 2024-06-22 05:55:11,891 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:55:29] 2024-06-22 05:55:11,891 | INFO     | aborting loop
[2024-06-22 07:55:29] 2024-06-22 05:55:12,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 07:55:29] 2024-06-22 05:55:12,264 | INFO     | all job control threads have been joined
[2024-06-22 07:55:29] 2024-06-22 05:55:12,306 | INFO     | all payload control threads have been joined
[2024-06-22 07:55:29] 2024-06-22 05:55:12,412 | INFO     | all data control threads have been joined
[2024-06-22 07:55:29] 2024-06-22 05:55:12,593 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 07:55:29] 2024-06-22 05:55:12,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 07:55:29] 2024-06-22 05:55:12,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 07:55:29] 2024-06-22 05:55:12,659 | INFO     | [job] retrieve thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:12,891 | INFO     | [job] job monitor thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,034 | INFO     | [data] copytool_in thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,269 | INFO     | [job] control thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,288 | INFO     | [payload] validate_post thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,313 | INFO     | [payload] control thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,334 | INFO     | [payload] failed_post thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 07:55:29] 2024-06-22 05:55:13,344 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,418 | INFO     | [data] control thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,540 | INFO     | [job] validate thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,594 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:13,793 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:14,039 | INFO     | [data] copytool_out thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:14,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 07:55:29] 2024-06-22 05:55:14,346 | INFO     | [job] queue monitor thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:18,121 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:21,740 | INFO     | job.realtimelogging is not enabled
[2024-06-22 07:55:29] 2024-06-22 05:55:22,745 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 07:55:29] 2024-06-22 05:55:23,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47983412421696)>', '<ExcThread(monitor, started 47983596898048)>']
[2024-06-22 07:55:29] 2024-06-22 05:55:23,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 07:55:29] 2024-06-22 05:55:23,649 | INFO     | [monitor] control thread has ended
[2024-06-22 07:55:29] 2024-06-22 05:55:28,620 | INFO     | all workflow threads have been joined
[2024-06-22 07:55:29] 2024-06-22 05:55:28,620 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 07:55:29] 2024-06-22 05:55:28,620 | INFO     | traces error code: 0
[2024-06-22 07:55:29] 2024-06-22 05:55:28,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 07:55:29] 2024-06-22 05:55:28,758 [wrapper] ==== pilot stdout END ====
[2024-06-22 07:55:29] 2024-06-22 05:55:28,764 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 07:55:29] 2024-06-22 05:55:28,767 [wrapper] pilotpid: 850009
[2024-06-22 07:55:29] 2024-06-22 05:55:28,773 [wrapper] Pilot exit status: 0
[2024-06-22 07:55:29] 2024-06-22 05:55:28,838 [wrapper] pandaids: 6239656837
[2024-06-22 07:55:29] 2024-06-22 05:55:28,930 [wrapper] cleanup supervisor_pilot 1481073 850010
[2024-06-22 07:55:29] 2024-06-22 05:55:28,933 [wrapper] Test setup, not cleaning
[2024-06-22 07:55:29] 2024-06-22 05:55:28,936 [wrapper] ==== wrapper stdout END ====
[2024-06-22 07:55:29] 2024-06-22 05:55:28,941 [wrapper] ==== wrapper stderr END ====
[2024-06-22 07:55:29] 2024-06-22 05:55:28,978 [wrapper] apfmon messages muted
[2024-06-22 07:55:29]  *** Error codes and diagnostics ***
[2024-06-22 07:55:29]     "exeErrorCode": 0,
[2024-06-22 07:55:29]     "exeErrorDiag": "",
[2024-06-22 07:55:29]     "pilotErrorCode": 0,
[2024-06-22 07:55:29]     "pilotErrorDiag": "",
[2024-06-22 07:55:29]  *** Listing of results directory ***
[2024-06-22 07:55:30] total 850212
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc    469766 Jun 21 13:59 pilot3.tar.gz
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc      5654 Jun 21 14:09 queuedata.json
[2024-06-22 07:55:30] -rwx------ 1 boinc boinc     32308 Jun 21 14:11 runpilot2-wrapper.sh
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc       100 Jun 22 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 07:55:30] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 03:13 run_atlas
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc       105 Jun 22 03:13 job.xml
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc      6661 Jun 22 03:13 init_data.xml
[2024-06-22 07:55:30] -rw-r--r-- 2 boinc boinc 598499977 Jun 22 03:13 EVNT.40024012._000004.pool.root.1
[2024-06-22 07:55:30] -rw-r--r-- 2 boinc boinc     17537 Jun 22 03:13 start_atlas.sh
[2024-06-22 07:55:30] drwxrwx--x 2 boinc boinc      4096 Jun 22 03:13 shared
[2024-06-22 07:55:30] -rw-r--r-- 2 boinc boinc    482493 Jun 22 03:13 input.tar.gz
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc         0 Jun 22 03:13 boinc_lockfile
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc      2505 Jun 22 03:13 pandaJob.out
[2024-06-22 07:55:30] -rw------- 1 boinc boinc       424 Jun 22 03:13 setup.sh.local
[2024-06-22 07:55:30] -rw------- 1 boinc boinc   1025937 Jun 22 03:13 agis_schedconf.cvmfs.json
[2024-06-22 07:55:30] -rw------- 1 boinc boinc   1321363 Jun 22 03:13 cric_ddmendpoints.json
[2024-06-22 07:55:30] drwx------ 4 boinc boinc      4096 Jun 22 03:13 pilot3
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc       532 Jun 22 07:54 boinc_task_state.xml
[2024-06-22 07:55:30] -rw------- 1 boinc boinc 264363556 Jun 22 07:54 HITS.40024014._001221.pool.root.1
[2024-06-22 07:55:30] -rw------- 1 boinc boinc        95 Jun 22 07:54 pilot_heartbeat.json
[2024-06-22 07:55:30] -rw------- 1 boinc boinc      1048 Jun 22 07:54 memory_monitor_summary.json
[2024-06-22 07:55:30] -rw------- 1 boinc boinc         0 Jun 22 07:54 agis_ddmendpoints.agis.ALL.json
[2024-06-22 07:55:30] -rw------- 1 boinc boinc    376592 Jun 22 07:54 log.40024014._001221.job.log.tgz.1
[2024-06-22 07:55:30] -rw------- 1 boinc boinc      7756 Jun 22 07:55 heartbeat.json
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc        28 Jun 22 07:55 wrapper_checkpoint.txt
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc      8192 Jun 22 07:55 boinc_mmap_file
[2024-06-22 07:55:30] -rw------- 1 boinc boinc      4293 Jun 22 07:55 pilotlog.txt
[2024-06-22 07:55:30] -rw------- 1 boinc boinc   1732541 Jun 22 07:55 log.40024014._001221.job.log.1
[2024-06-22 07:55:30] -rw------- 1 boinc boinc       357 Jun 22 07:55 output.list
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc       620 Jun 22 07:55 runtime_log
[2024-06-22 07:55:30] -rw------- 1 boinc boinc   2129920 Jun 22 07:55 result.tar.gz
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc     11410 Jun 22 07:55 runtime_log.err
[2024-06-22 07:55:30] -rw------- 1 boinc boinc       659 Jun 22 07:55 UpzNDmjHse5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm0hmKDmIjzPOo.diag
[2024-06-22 07:55:30] -rw-r--r-- 1 boinc boinc     21301 Jun 22 07:55 stderr.txt
[2024-06-22 07:55:30] HITS file was successfully produced:
[2024-06-22 07:55:30] -rw------- 1 boinc boinc 264363556 Jun 22 07:54 shared/HITS.pool.root.1
[2024-06-22 07:55:30]  *** Contents of shared directory: ***
[2024-06-22 07:55:30] total 845224
[2024-06-22 07:55:30] -rw-r--r-- 2 boinc boinc 598499977 Jun 22 03:13 ATLAS.root_0
[2024-06-22 07:55:30] -rw-r--r-- 2 boinc boinc     17537 Jun 22 03:13 start_atlas.sh
[2024-06-22 07:55:30] -rw-r--r-- 2 boinc boinc    482493 Jun 22 03:13 input.tar.gz
[2024-06-22 07:55:30] -rw------- 1 boinc boinc 264363556 Jun 22 07:54 HITS.pool.root.1
[2024-06-22 07:55:30] -rw------- 1 boinc boinc   2129920 Jun 22 07:55 result.tar.gz
07:55:31 (845668): run_atlas exited; CPU time 63804.637237
07:55:31 (845668): called boinc_finish(0)

</stderr_txt>
]]>

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