Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:55 (27399): wrapper (7.7.26015): starting
12:19:55 (27399): wrapper: running run_atlas (--nthreads 8)
[2024-06-21 12:19:55] Arguments: --nthreads 8
[2024-06-21 12:19:55] Threads: 8
[2024-06-21 12:19:55] Checking for CVMFS
[2024-06-21 12:19:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 12:19:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 12:19:55] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 12:19:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 12:19:56] 2.11.2.0 2604 15503 116848 134133 3 343 11531273 18432000 22390 130560 0 7911842 99.009 15988766 56197 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-21 12:19:56] CVMFS is ok
[2024-06-21 12:19:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 12:19:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 12:19:56] Further information can be found at the LHC@home message board.
[2024-06-21 12:19:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 12:19:56] Checking for apptainer binary...
[2024-06-21 12:19:56] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 12:19:56] Running /usr/bin/apptainer --version
[2024-06-21 12:19:56] apptainer version 1.3.1-1.el7
[2024-06-21 12:19:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 12:20:04] c-212-5.aglt2.org
[2024-06-21 12:20:04] apptainer works
[2024-06-21 12:20:04] Set ATHENA_PROC_NUMBER=8
[2024-06-21 12:20:04] Set ATHENA_CORE_NUMBER=8
[2024-06-21 12:20:04] Starting ATLAS job with PandaID=6239621016
[2024-06-21 12:20:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 22:34:49]  *** The last 200 lines of the pilot log: ***
[2024-06-21 22:34:49] 2024-06-22 02:34:22,119 | INFO     | monitor loop #2633: job 0:6239621016 is in state 'finished'
[2024-06-21 22:34:49] 2024-06-22 02:34:22,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 22:34:49] 2024-06-22 02:34:24,625 | INFO     | monitor loop #2634: job 0:6239621016 is in state 'finished'
[2024-06-21 22:34:49] 2024-06-22 02:34:24,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,610 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-21 22:34:49] 2024-06-22 02:34:25,610 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6239621016/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,611 | INFO     | extracted standard info from prmon json
[2024-06-21 22:34:49] 2024-06-22 02:34:25,611 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 22:34:49] 2024-06-22 02:34:25,611 | WARNING  | GPU info not found in prmon json
[2024-06-21 22:34:49] 2024-06-22 02:34:25,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 22:34:49] 2024-06-22 02:34:25,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 22:34:49] 2024-06-22 02:34:25,638 | INFO     | fitting pss+swap vs Time
[2024-06-21 22:34:49] 2024-06-22 02:34:25,639 | INFO     | model: linear, x: [1718987090.0, 1718987151.0, 1718987212.0, 1718987273.0, 1718987334.0, 1718987395.0, 1718987456.0, 1718987517.0, 1718987578.0, 1718987639.0, 1718
[2024-06-21 22:34:49] 2024-06-22 02:34:25,639 | INFO     | sum of square deviations: 66643526407.67263
[2024-06-21 22:34:49] 2024-06-22 02:34:25,647 | INFO     | sum of deviations: 1161772898882.4087
[2024-06-21 22:34:49] 2024-06-22 02:34:25,647 | INFO     | mean x: 1719005329.0233722
[2024-06-21 22:34:49] 2024-06-22 02:34:25,648 | INFO     | mean y: 2442599.470784641
[2024-06-21 22:34:49] 2024-06-22 02:34:25,648 | INFO     | -- intersect: -29964366060.64039
[2024-06-21 22:34:49] 2024-06-22 02:34:25,648 | INFO     | intersect: -29964366060.64039
[2024-06-21 22:34:49] 2024-06-22 02:34:25,648 | INFO     | chi2: 14.867093004956297
[2024-06-21 22:34:49] 2024-06-22 02:34:25,649 | INFO     | model: linear, x: [1718987090.0, 1718987151.0, 1718987212.0, 1718987273.0, 1718987334.0, 1718987395.0, 1718987456.0, 1718987517.0, 1718987578.0, 1718987639.0, 1718
[2024-06-21 22:34:49] 2024-06-22 02:34:25,649 | INFO     | sum of square deviations: 64988550810.17011
[2024-06-21 22:34:49] 2024-06-22 02:34:25,654 | INFO     | sum of deviations: 1150302087855.025
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | mean x: 1719005176.523569
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | mean y: 2441542.4983164985
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | -- intersect: -30424075419.920483
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | intersect: -30424075419.920483
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | chi2: 14.860343130277423
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | current chi2=14.860343130277423 (change=0.045401442478526934 %)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,655 | INFO     | right removable region: 593
[2024-06-21 22:34:49] 2024-06-22 02:34:25,656 | INFO     | model: linear, x: [1718987395.0, 1718987456.0, 1718987517.0, 1718987578.0, 1718987639.0, 1718987700.0, 1718987761.0, 1718987822.0, 1718987883.0, 1718987944.0, 1718
[2024-06-21 22:34:49] 2024-06-22 02:34:25,656 | INFO     | sum of square deviations: 64988542270.17011
[2024-06-21 22:34:49] 2024-06-22 02:34:25,661 | INFO     | sum of deviations: 970027099320.239
[2024-06-21 22:34:49] 2024-06-22 02:34:25,662 | INFO     | mean x: 1719005481.523569
[2024-06-21 22:34:49] 2024-06-22 02:34:25,662 | INFO     | mean y: 2460260.34006734
[2024-06-21 22:34:49] 2024-06-22 02:34:25,662 | INFO     | -- intersect: -25655630269.308205
[2024-06-21 22:34:49] 2024-06-22 02:34:25,662 | INFO     | intersect: -25655630269.308205
[2024-06-21 22:34:49] 2024-06-22 02:34:25,662 | INFO     | chi2: 10.805327849779179
[2024-06-21 22:34:49] 2024-06-22 02:34:25,662 | INFO     | current chi2=10.805327849779179 (change=27.32050679862589 %)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,663 | INFO     | model: linear, x: [1718987700.0, 1718987761.0, 1718987822.0, 1718987883.0, 1718987944.0, 1718988005.0, 1718988066.0, 1718988127.0, 1718988188.0, 1718988249.0, 1718
[2024-06-21 22:34:49] 2024-06-22 02:34:25,663 | INFO     | sum of square deviations: 63361186557.667145
[2024-06-21 22:34:49] 2024-06-22 02:34:25,668 | INFO     | sum of deviations: 834504785743.9596
[2024-06-21 22:34:49] 2024-06-22 02:34:25,668 | INFO     | mean x: 1719005634.0237691
[2024-06-21 22:34:49] 2024-06-22 02:34:25,669 | INFO     | mean y: 2472960.2886247877
[2024-06-21 22:34:49] 2024-06-22 02:34:25,669 | INFO     | -- intersect: -22637861071.462208
[2024-06-21 22:34:49] 2024-06-22 02:34:25,669 | INFO     | intersect: -22637861071.462208
[2024-06-21 22:34:49] 2024-06-22 02:34:25,669 | INFO     | chi2: 8.95422083324704
[2024-06-21 22:34:49] 2024-06-22 02:34:25,669 | INFO     | current chi2=8.95422083324704 (change=17.13142851625708 %)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,669 | INFO     | left removable region: 20
[2024-06-21 22:34:49] 2024-06-22 02:34:25,670 | INFO     | model: linear, x: [1718988310.0, 1718988371.0, 1718988432.0, 1718988493.0, 1718988554.0, 1718988615.0, 1718988676.0, 1718988737.0, 1718988798.0, 1718988859.0, 1718
[2024-06-21 22:34:49] 2024-06-22 02:34:25,670 | INFO     | sum of square deviations: 58336612653.65783
[2024-06-21 22:34:49] 2024-06-22 02:34:25,675 | INFO     | sum of deviations: 582662080964.9116
[2024-06-21 22:34:49] 2024-06-22 02:34:25,675 | INFO     | mean x: 1719005756.024433
[2024-06-21 22:34:49] 2024-06-22 02:34:25,675 | INFO     | mean y: 2495690.64921466
[2024-06-21 22:34:49] 2024-06-22 02:34:25,676 | INFO     | -- intersect: -17166815749.188988
[2024-06-21 22:34:49] 2024-06-22 02:34:25,676 | INFO     | intersect: -17166815749.188988
[2024-06-21 22:34:49] 2024-06-22 02:34:25,676 | INFO     | chi2: 5.941744106554257
[2024-06-21 22:34:49] 2024-06-22 02:34:25,676 | INFO     | -- intersect: -17166815749.188988
[2024-06-21 22:34:49] 2024-06-22 02:34:25,676 | INFO     | current memory leak: 9.99 B/s (using 573 data points, chi2=5.94)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | ..............................
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . Timing measurements:
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . get job = 0 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . initial setup = 2 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . payload setup = 54 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . stage-in = 0 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . payload execution = 36600 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . stage-out = 4 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | . log creation = 1 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,678 | INFO     | ..............................
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | 
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | job summary report
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | --------------------------------------------------
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | PanDA job id: 6239621016
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | task id: 38921007
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | errors: (none)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | pilot state: finished 
[2024-06-21 22:34:49] 2024-06-22 02:34:25,768 | INFO     | transexitcode: 0
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | exeerrorcode: 0
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | exeerrordiag: 
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | exitcode: 0
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | exitmsg: OK
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | cpuconsumptiontime: 129634 s
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | nevents: 400
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | neventsw: 0
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | pid: 67267
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | pgrp: 67267
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | corecount: 8
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | event service: False
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | sizes: {0: 2386917, 1: 2387116, 11: 2387116, 22: 2387144, 33: 2387406, 43: 2387406, 36656: 2427349, 36661: 2436309, 36664: 2436365, 36699: 2436535}
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | --------------------------------------------------
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | 
[2024-06-21 22:34:49] 2024-06-22 02:34:25,769 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-06-21 22:34:49] 2024-06-22 02:34:25,862 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,862 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,862 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,864 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,864 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 22:34:49] 2024-06-22 02:34:25,864 | INFO     | job 6239621016 has completed (purged errors)
[2024-06-21 22:34:49] 2024-06-22 02:34:25,864 | INFO     | overall cleanup function is called
[2024-06-21 22:34:49] 2024-06-22 02:34:26,884 | INFO     | --- collectZombieJob: --- 10, [67267]
[2024-06-21 22:34:49] 2024-06-22 02:34:26,884 | INFO     | zombie collector waiting for pid 67267
[2024-06-21 22:34:49] 2024-06-22 02:34:26,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 22:34:49] 2024-06-22 02:34:27,890 | INFO     | collected zombie processes
[2024-06-21 22:34:49] 2024-06-22 02:34:27,890 | INFO     | will now attempt to kill all subprocesses of pid=67267
[2024-06-21 22:34:49] 2024-06-22 02:34:28,046 | INFO     | process IDs to be killed: [67267] (in reverse order)
[2024-06-21 22:34:49] 2024-06-22 02:34:28,402 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 22:34:49] 2024-06-22 02:34:28,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 22:34:49] 2024-06-22 02:34:28,412 | INFO     | did not find any defunct processes belonging to 67267
[2024-06-21 22:34:49] 2024-06-22 02:34:28,421 | INFO     | did not find any defunct processes belonging to 67267
[2024-06-21 22:34:49] 2024-06-22 02:34:28,421 | INFO     | ready for new job
[2024-06-21 22:34:49] 2024-06-22 02:34:28,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 22:34:49] 2024-06-22 02:34:28,424 | INFO     | *************************************
[2024-06-21 22:34:49] 2024-06-22 02:34:28,424 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 22:34:49] 2024-06-22 02:34:28,424 | INFO     | *************************************
[2024-06-21 22:34:49] 2024-06-22 02:34:28,424 | INFO     | 
[2024-06-21 22:34:49] 2024-06-22 02:34:28,428 | INFO     | architecture information:
[2024-06-21 22:34:49] 2024-06-22 02:34:28,429 | INFO     | executing command: cat /etc/os-release
[2024-06-21 22:34:49] 2024-06-22 02:34:28,565 | INFO     | cat /etc/os-release:
[2024-06-21 22:34:49] NAME="CentOS Linux"
[2024-06-21 22:34:49] VERSION="7 (Core)"
[2024-06-21 22:34:49] ID="centos"
[2024-06-21 22:34:49] ID_LIKE="rhel fedora"
[2024-06-21 22:34:49] VERSION_ID="7"
[2024-06-21 22:34:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 22:34:49] ANSI_COLOR="0;31"
[2024-06-21 22:34:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 22:34:49] HOME_URL="https://www.centos.org/"
[2024-06-21 22:34:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 22:34:49] 
[2024-06-21 22:34:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 22:34:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 22:34:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 22:34:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 22:34:49] 
[2024-06-21 22:34:49] 2024-06-22 02:34:28,565 | INFO     | *************************************
[2024-06-21 22:34:49] 2024-06-22 02:34:29,068 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-06-21 22:34:49] 2024-06-22 02:34:29,113 | INFO     | sufficient remaining disk space (99538173952 B)
[2024-06-21 22:34:49] 2024-06-22 02:34:29,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 22:34:49] 2024-06-22 02:34:29,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 22:34:49] 2024-06-22 02:34:29,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 22:34:49] 2024-06-22 02:34:29,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 22:34:49] 2024-06-22 02:34:29,115 | INFO     | aborting loop
[2024-06-21 22:34:49] 2024-06-22 02:34:29,452 | INFO     | all job control threads have been joined
[2024-06-21 22:34:49] 2024-06-22 02:34:29,592 | INFO     | all data control threads have been joined
[2024-06-21 22:34:49] 2024-06-22 02:34:29,686 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 22:34:49] 2024-06-22 02:34:29,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 22:34:49] 2024-06-22 02:34:29,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 22:34:49] 2024-06-22 02:34:30,120 | INFO     | [job] retrieve thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,121 | INFO     | [job] job monitor thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,193 | INFO     | [data] copytool_in thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,276 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,333 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,391 | INFO     | [payload] validate_post thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,406 | INFO     | all payload control threads have been joined
[2024-06-21 22:34:49] 2024-06-22 02:34:30,458 | INFO     | [job] control thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,598 | INFO     | [data] control thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:30,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 22:34:49] 2024-06-22 02:34:31,116 | INFO     | [data] copytool_out thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:31,150 | INFO     | [job] validate thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:31,166 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:31,414 | INFO     | [payload] control thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:31,516 | INFO     | [payload] failed_post thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:31,794 | INFO     | [job] queue monitor thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:32,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 22:34:49] 2024-06-22 02:34:36,201 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:39,211 | INFO     | job.realtimelogging is not enabled
[2024-06-21 22:34:49] 2024-06-22 02:34:40,216 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 22:34:49] 2024-06-22 02:34:42,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386306688832)>', '<ExcThread(monitor, started 140385502361344)>']
[2024-06-21 22:34:49] 2024-06-22 02:34:42,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 22:34:49] 2024-06-22 02:34:42,762 | INFO     | [monitor] control thread has ended
[2024-06-21 22:34:49] 2024-06-22 02:34:47,117 | INFO     | all workflow threads have been joined
[2024-06-21 22:34:49] 2024-06-22 02:34:47,117 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 22:34:49] 2024-06-22 02:34:47,118 | INFO     | traces error code: 0
[2024-06-21 22:34:49] 2024-06-22 02:34:47,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 22:34:49] 2024-06-22 02:34:47,307 [wrapper] ==== pilot stdout END ====
[2024-06-21 22:34:49] 2024-06-22 02:34:47,311 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 22:34:49] 2024-06-22 02:34:47,318 [wrapper] pilotpid: 45888
[2024-06-21 22:34:49] 2024-06-22 02:34:47,320 [wrapper] Pilot exit status: 0
[2024-06-21 22:34:49] 2024-06-22 02:34:47,367 [wrapper] pandaids: 6239621016
[2024-06-21 22:34:49] 2024-06-22 02:34:47,566 [wrapper] cleanup supervisor_pilot 49309 45889
[2024-06-21 22:34:49] 2024-06-22 02:34:47,603 [wrapper] Test setup, not cleaning
[2024-06-21 22:34:49] 2024-06-22 02:34:47,641 [wrapper] ==== wrapper stdout END ====
[2024-06-21 22:34:49] 2024-06-22 02:34:47,686 [wrapper] ==== wrapper stderr END ====
[2024-06-21 22:34:49] 2024-06-22 02:34:47,695 [wrapper] apfmon messages muted
[2024-06-21 22:34:49]  *** Error codes and diagnostics ***
[2024-06-21 22:34:49]     "exeErrorCode": 0,
[2024-06-21 22:34:49]     "exeErrorDiag": "",
[2024-06-21 22:34:49]     "pilotErrorCode": 0,
[2024-06-21 22:34:49]     "pilotErrorDiag": "",
[2024-06-21 22:34:49]  *** Listing of results directory ***
[2024-06-21 22:34:49] total 929860
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas    469766 Jun 21 07:42 pilot3.tar.gz
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas      5654 Jun 21 07:53 queuedata.json
[2024-06-21 22:34:49] -rwx------ 1 boincer umatlas     32308 Jun 21 07:54 runpilot2-wrapper.sh
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas       100 Jun 21 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 22:34:49] -rwxr-xr-x 1 boincer umatlas      7986 Jun 21 12:19 run_atlas
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas       105 Jun 21 12:19 job.xml
[2024-06-21 22:34:49] drwxrwx--x 2 boincer umatlas      4096 Jun 21 12:19 shared
[2024-06-21 22:34:49] -rw-r--r-- 2 boincer umatlas    482534 Jun 21 12:19 input.tar.gz
[2024-06-21 22:34:49] -rw-r--r-- 2 boincer umatlas 583361795 Jun 21 12:19 EVNT.38776201._000787.pool.root.1
[2024-06-21 22:34:49] -rw-r--r-- 2 boincer umatlas     17537 Jun 21 12:19 start_atlas.sh
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas         0 Jun 21 12:19 boinc_lockfile
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas      2630 Jun 21 12:20 pandaJob.out
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas       467 Jun 21 12:20 setup.sh.local
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas   1023047 Jun 21 12:21 agis_schedconf.cvmfs.json
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas   1321307 Jun 21 12:21 cric_ddmendpoints.json
[2024-06-21 22:34:49] drwx------ 4 boincer umatlas      4096 Jun 21 12:21 pilot3
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas      6388 Jun 21 22:31 init_data.xml
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas 356698468 Jun 21 22:32 HITS.38921007._052700.pool.root.1
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas       533 Jun 21 22:32 boinc_task_state.xml
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas      1094 Jun 21 22:33 memory_monitor_summary.json
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas         0 Jun 21 22:33 agis_ddmendpoints.agis.ALL.json
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas    644657 Jun 21 22:33 log.38921007._052700.job.log.tgz.1
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas        95 Jun 21 22:34 pilot_heartbeat.json
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas      7772 Jun 21 22:34 heartbeat.json
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas      4283 Jun 21 22:34 pilotlog.txt
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas      8192 Jun 21 22:34 boinc_mmap_file
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas        29 Jun 21 22:34 wrapper_checkpoint.txt
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas   3642568 Jun 21 22:34 log.38921007._052700.job.log.1
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas       357 Jun 21 22:34 output.list
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas       620 Jun 21 22:34 runtime_log
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas   4311040 Jun 21 22:34 result.tar.gz
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas     11400 Jun 21 22:34 runtime_log.err
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas       654 Jun 21 22:34 GerNDmY1re5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmo3XKDmhYWuan.diag
[2024-06-21 22:34:49] -rw-r--r-- 1 boincer umatlas     21674 Jun 21 22:34 stderr.txt
[2024-06-21 22:34:49] HITS file was successfully produced:
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas 356698468 Jun 21 22:32 shared/HITS.pool.root.1
[2024-06-21 22:34:49]  *** Contents of shared directory: ***
[2024-06-21 22:34:49] total 922744
[2024-06-21 22:34:49] -rw-r--r-- 2 boincer umatlas    482534 Jun 21 12:19 input.tar.gz
[2024-06-21 22:34:49] -rw-r--r-- 2 boincer umatlas 583361795 Jun 21 12:19 ATLAS.root_0
[2024-06-21 22:34:49] -rw-r--r-- 2 boincer umatlas     17537 Jun 21 12:19 start_atlas.sh
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas 356698468 Jun 21 22:32 HITS.pool.root.1
[2024-06-21 22:34:49] -rw------- 1 boincer umatlas   4311040 Jun 21 22:34 result.tar.gz
22:34:50 (27399): run_atlas exited; CPU time 127004.224537
22:34:50 (27399): called boinc_finish(0)

</stderr_txt>
]]>

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