Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
18:02:20 (59345): wrapper (7.7.26015): starting
18:02:20 (59345): wrapper: running run_atlas (--nthreads 12)
[2024-06-22 18:02:20] Arguments: --nthreads 12
[2024-06-22 18:02:20] Threads: 12
[2024-06-22 18:02:20] Checking for CVMFS
[2024-06-22 18:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-22 18:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-22 18:02:20] Running cvmfs_config stat atlas.cern.ch
[2024-06-22 18:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-22 18:02:20] 2.10.1.0 2811 224813 125236 134184 1 301 39656092 45568001 12379 130560 0 1342529583 99.759 858162868 16944 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-22 18:02:20] CVMFS is ok
[2024-06-22 18:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 18:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 18:02:20] Further information can be found at the LHC@home message board.
[2024-06-22 18:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 18:02:20] Checking for apptainer binary...
[2024-06-22 18:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-22 18:02:20] Running /usr/bin/apptainer --version
[2024-06-22 18:02:20] apptainer version 1.3.2-1.el7
[2024-06-22 18:02:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 18:02:22] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0133.triumf.lcg
[2024-06-22 18:02:22] apptainer works
[2024-06-22 18:02:22] Set ATHENA_PROC_NUMBER=12
[2024-06-22 18:02:22] Set ATHENA_CORE_NUMBER=12
[2024-06-22 18:02:22] Starting ATLAS job with PandaID=6239602958
[2024-06-22 18:02:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 00:57:13]  *** The last 200 lines of the pilot log: ***
[2024-06-23 00:57:13] 2024-06-23 07:56:50,768 | INFO     | model: linear, x: [1719105501.0, 1719105562.0, 1719105623.0, 1719105685.0, 1719105747.0, 1719105808.0, 1719105868.0, 1719105928.0, 1719105990.0, 1719106054.0, 1719
[2024-06-23 00:57:13] 2024-06-23 07:56:50,768 | INFO     | sum of square deviations: 18678098320.997597
[2024-06-23 00:57:13] 2024-06-23 07:56:50,771 | INFO     | sum of deviations: 84594190873.11223
[2024-06-23 00:57:13] 2024-06-23 07:56:50,771 | INFO     | mean x: 1719117428.247449
[2024-06-23 00:57:13] 2024-06-23 07:56:50,772 | INFO     | mean y: 2754586.112244898
[2024-06-23 00:57:13] 2024-06-23 07:56:50,772 | INFO     | -- intersect: -7783227978.021257
[2024-06-23 00:57:13] 2024-06-23 07:56:50,772 | INFO     | intersect: -7783227978.021257
[2024-06-23 00:57:13] 2024-06-23 07:56:50,772 | INFO     | chi2: 0.5512729938134685
[2024-06-23 00:57:13] 2024-06-23 07:56:50,772 | INFO     | current chi2=0.5512729938134685 (change=76.19368105871764 %)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,772 | INFO     | model: linear, x: [1719105808.0, 1719105868.0, 1719105928.0, 1719105990.0, 1719106054.0, 1719106112.0, 1719106172.0, 1719106234.0, 1719106294.0, 1719106356.0, 1719
[2024-06-23 00:57:13] 2024-06-23 07:56:50,773 | INFO     | sum of square deviations: 17972310072.12897
[2024-06-23 00:57:13] 2024-06-23 07:56:50,775 | INFO     | sum of deviations: 40093700114.08527
[2024-06-23 00:57:13] 2024-06-23 07:56:50,775 | INFO     | mean x: 1719117580.7622738
[2024-06-23 00:57:13] 2024-06-23 07:56:50,775 | INFO     | mean y: 2764189.403100775
[2024-06-23 00:57:13] 2024-06-23 07:56:50,775 | INFO     | -- intersect: -3832345736.2164683
[2024-06-23 00:57:13] 2024-06-23 07:56:50,775 | INFO     | intersect: -3832345736.2164683
[2024-06-23 00:57:13] 2024-06-23 07:56:50,776 | INFO     | chi2: 0.18773652343497416
[2024-06-23 00:57:13] 2024-06-23 07:56:50,776 | INFO     | current chi2=0.18773652343497416 (change=65.94490832277235 %)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,776 | INFO     | model: linear, x: [1719106112.0, 1719106172.0, 1719106234.0, 1719106294.0, 1719106356.0, 1719106416.0, 1719106477.0, 1719106538.0, 1719106599.0, 1719106660.0, 1719
[2024-06-23 00:57:13] 2024-06-23 07:56:50,776 | INFO     | sum of square deviations: 17284640318.295746
[2024-06-23 00:57:13] 2024-06-23 07:56:50,779 | INFO     | sum of deviations: 10770091926.685863
[2024-06-23 00:57:13] 2024-06-23 07:56:50,779 | INFO     | mean x: 1719117733.2643979
[2024-06-23 00:57:13] 2024-06-23 07:56:50,779 | INFO     | mean y: 2770682.329842932
[2024-06-23 00:57:13] 2024-06-23 07:56:50,779 | INFO     | -- intersect: -1068414814.1051193
[2024-06-23 00:57:13] 2024-06-23 07:56:50,779 | INFO     | intersect: -1068414814.1051193
[2024-06-23 00:57:13] 2024-06-23 07:56:50,780 | INFO     | chi2: 0.01767279608485402
[2024-06-23 00:57:13] 2024-06-23 07:56:50,780 | INFO     | current chi2=0.01767279608485402 (change=90.58638363942256 %)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,780 | INFO     | model: linear, x: [1719106416.0, 1719106477.0, 1719106538.0, 1719106599.0, 1719106660.0, 1719106721.0, 1719106782.0, 1719106847.0, 1719106908.0, 1719106967.0, 1719
[2024-06-23 00:57:13] 2024-06-23 07:56:50,780 | INFO     | sum of square deviations: 16614622318.726692
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | sum of deviations: 4074253254.068966
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | mean x: 1719117885.779841
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | mean y: 2772204.4827586208
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | -- intersect: -418791494.4026613
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | intersect: -418791494.4026613
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | chi2: 0.009289623145549633
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | current chi2=0.009289623145549633 (change=47.435464648907214 %)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,783 | INFO     | model: linear, x: [1719106721.0, 1719106782.0, 1719106847.0, 1719106908.0, 1719106967.0, 1719107031.0, 1719107088.0, 1719107149.0, 1719107216.0, 1719107277.0, 1719
[2024-06-23 00:57:13] 2024-06-23 07:56:50,784 | INFO     | sum of square deviations: 15962070532.674604
[2024-06-23 00:57:13] 2024-06-23 07:56:50,786 | INFO     | sum of deviations: 2358059162.5134425
[2024-06-23 00:57:13] 2024-06-23 07:56:50,786 | INFO     | mean x: 1719118038.3037634
[2024-06-23 00:57:13] 2024-06-23 07:56:50,786 | INFO     | mean y: 2772602.561827957
[2024-06-23 00:57:13] 2024-06-23 07:56:50,786 | INFO     | -- intersect: -251190818.62254596
[2024-06-23 00:57:13] 2024-06-23 07:56:50,786 | INFO     | intersect: -251190818.62254596
[2024-06-23 00:57:13] 2024-06-23 07:56:50,787 | INFO     | chi2: 0.008155097542641935
[2024-06-23 00:57:13] 2024-06-23 07:56:50,787 | INFO     | current chi2=0.008155097542641935 (change=12.21282699127805 %)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,787 | INFO     | left removable region: 70
[2024-06-23 00:57:13] 2024-06-23 07:56:50,787 | INFO     | model: linear, x: [1719108856.0, 1719108917.0, 1719108978.0, 1719109039.0, 1719109100.0, 1719109161.0, 1719109227.0, 1719109283.0, 1719109344.0, 1719109405.0, 1719
[2024-06-23 00:57:13] 2024-06-23 07:56:50,787 | INFO     | sum of square deviations: 11245489602.42891
[2024-06-23 00:57:13] 2024-06-23 07:56:50,789 | INFO     | sum of deviations: 11415703898.274925
[2024-06-23 00:57:13] 2024-06-23 07:56:50,789 | INFO     | mean x: 1719118922.7220545
[2024-06-23 00:57:13] 2024-06-23 07:56:50,789 | INFO     | mean y: 2769942.9486404834
[2024-06-23 00:57:13] 2024-06-23 07:56:50,789 | INFO     | -- intersect: -1742369955.9382484
[2024-06-23 00:57:13] 2024-06-23 07:56:50,789 | INFO     | intersect: -1742369955.9382484
[2024-06-23 00:57:13] 2024-06-23 07:56:50,789 | INFO     | chi2: 0.003113419019808358
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | -- intersect: -1742369955.9382484
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | current memory leak: 1.02 B/s (using 331 data points, chi2=0.00)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | ..............................
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | . Timing measurements:
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | . get job = 0 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | . initial setup = 2 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | . payload setup = 5 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | . stage-in = 0 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,790 | INFO     | . payload execution = 24828 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,791 | INFO     | . stage-out = 2 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,791 | INFO     | . log creation = 0 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,791 | INFO     | ..............................
[2024-06-23 00:57:13] 2024-06-23 07:56:50,846 | INFO     | 
[2024-06-23 00:57:13] 2024-06-23 07:56:50,847 | INFO     | job summary report
[2024-06-23 00:57:13] 2024-06-23 07:56:50,847 | INFO     | --------------------------------------------------
[2024-06-23 00:57:13] 2024-06-23 07:56:50,847 | INFO     | PanDA job id: 6239602958
[2024-06-23 00:57:13] 2024-06-23 07:56:50,847 | INFO     | task id: 38921001
[2024-06-23 00:57:13] 2024-06-23 07:56:50,847 | INFO     | errors: (none)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,848 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 00:57:13] 2024-06-23 07:56:50,848 | INFO     | pilot state: finished 
[2024-06-23 00:57:13] 2024-06-23 07:56:50,848 | INFO     | transexitcode: 0
[2024-06-23 00:57:13] 2024-06-23 07:56:50,848 | INFO     | exeerrorcode: 0
[2024-06-23 00:57:13] 2024-06-23 07:56:50,848 | INFO     | exeerrordiag: 
[2024-06-23 00:57:13] 2024-06-23 07:56:50,848 | INFO     | exitcode: 0
[2024-06-23 00:57:13] 2024-06-23 07:56:50,853 | INFO     | exitmsg: OK
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | cpuconsumptiontime: 86485 s
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | nevents: 400
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | neventsw: 0
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | pid: 81686
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | pgrp: 81686
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | corecount: 12
[2024-06-23 00:57:13] 2024-06-23 07:56:50,854 | INFO     | event service: False
[2024-06-23 00:57:13] 2024-06-23 07:56:50,855 | INFO     | sizes: {0: 2386955, 1: 2387154, 4: 2387360, 11: 2387388, 24838: 2422032, 24840: 2430986, 24841: 2431170, 24845: 2431340}
[2024-06-23 00:57:13] 2024-06-23 07:56:50,855 | INFO     | --------------------------------------------------
[2024-06-23 00:57:13] 2024-06-23 07:56:50,855 | INFO     | 
[2024-06-23 00:57:13] 2024-06-23 07:56:50,856 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-23 00:57:13] 2024-06-23 07:56:50,886 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,886 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,889 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 00:57:13] 2024-06-23 07:56:50,889 | INFO     | job 6239602958 has completed (purged errors)
[2024-06-23 00:57:13] 2024-06-23 07:56:50,889 | INFO     | overall cleanup function is called
[2024-06-23 00:57:13] 2024-06-23 07:56:51,899 | INFO     | --- collectZombieJob: --- 10, [81686]
[2024-06-23 00:57:13] 2024-06-23 07:56:51,899 | INFO     | zombie collector waiting for pid 81686
[2024-06-23 00:57:13] 2024-06-23 07:56:51,900 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 00:57:13] 2024-06-23 07:56:52,900 | INFO     | collected zombie processes
[2024-06-23 00:57:13] 2024-06-23 07:56:52,900 | INFO     | will now attempt to kill all subprocesses of pid=81686
[2024-06-23 00:57:13] 2024-06-23 07:56:53,193 | INFO     | process IDs to be killed: [81686] (in reverse order)
[2024-06-23 00:57:13] 2024-06-23 07:56:53,611 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 00:57:13] 2024-06-23 07:56:53,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 00:57:13] 2024-06-23 07:56:53,619 | INFO     | did not find any defunct processes belonging to 81686
[2024-06-23 00:57:13] 2024-06-23 07:56:53,625 | INFO     | did not find any defunct processes belonging to 81686
[2024-06-23 00:57:13] 2024-06-23 07:56:53,626 | INFO     | ready for new job
[2024-06-23 00:57:13] 2024-06-23 07:56:53,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 00:57:13] 2024-06-23 07:56:53,628 | INFO     | *************************************
[2024-06-23 00:57:13] 2024-06-23 07:56:53,629 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 00:57:13] 2024-06-23 07:56:53,629 | INFO     | *************************************
[2024-06-23 00:57:13] 2024-06-23 07:56:53,629 | INFO     | 
[2024-06-23 00:57:13] 2024-06-23 07:56:53,632 | INFO     | architecture information:
[2024-06-23 00:57:13] 2024-06-23 07:56:53,632 | INFO     | executing command: cat /etc/os-release
[2024-06-23 00:57:13] 2024-06-23 07:56:53,646 | INFO     | cat /etc/os-release:
[2024-06-23 00:57:13] NAME="CentOS Linux"
[2024-06-23 00:57:13] VERSION="7 (Core)"
[2024-06-23 00:57:13] ID="centos"
[2024-06-23 00:57:13] ID_LIKE="rhel fedora"
[2024-06-23 00:57:13] VERSION_ID="7"
[2024-06-23 00:57:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 00:57:13] ANSI_COLOR="0;31"
[2024-06-23 00:57:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 00:57:13] HOME_URL="https://www.centos.org/"
[2024-06-23 00:57:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 00:57:13] 
[2024-06-23 00:57:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 00:57:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 00:57:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 00:57:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 00:57:13] 
[2024-06-23 00:57:13] 2024-06-23 07:56:53,646 | INFO     | *************************************
[2024-06-23 00:57:13] 2024-06-23 07:56:54,149 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-23 00:57:13] 2024-06-23 07:56:54,167 | INFO     | sufficient remaining disk space (1783112925184 B)
[2024-06-23 00:57:13] 2024-06-23 07:56:54,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 00:57:13] 2024-06-23 07:56:54,167 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 00:57:13] 2024-06-23 07:56:54,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 00:57:13] 2024-06-23 07:56:54,168 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 00:57:13] 2024-06-23 07:56:54,168 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 00:57:13] 2024-06-23 07:56:54,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 00:57:13] 2024-06-23 07:56:54,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 00:57:13] 2024-06-23 07:56:54,340 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-23 00:57:13] 2024-06-23 07:56:54,340 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-23 00:57:13] 2024-06-23 07:56:54,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 00:57:13] 2024-06-23 07:56:54,340 | INFO     | will abort loop
[2024-06-23 00:57:13] 2024-06-23 07:56:54,597 | INFO     | all payload control threads have been joined
[2024-06-23 00:57:13] 2024-06-23 07:56:55,091 | INFO     | all data control threads have been joined
[2024-06-23 00:57:13] 2024-06-23 07:56:55,173 | INFO     | [job] retrieve thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,197 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,347 | INFO     | [job] job monitor thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,452 | INFO     | [data] copytool_in thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,562 | INFO     | [payload] failed_post thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,598 | INFO     | [payload] control thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,740 | INFO     | all job control threads have been joined
[2024-06-23 00:57:13] 2024-06-23 07:56:55,804 | INFO     | [job] validate thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:55,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 00:57:13] 2024-06-23 07:56:56,096 | INFO     | [data] control thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:56,157 | INFO     | [payload] validate_post thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:56,174 | INFO     | [data] copytool_out thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:56,453 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:56,460 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:56,741 | INFO     | [job] control thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:56,858 | INFO     | [job] queue monitor thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:56:57,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 00:57:13] 2024-06-23 07:57:01,250 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:57:04,608 | INFO     | job.realtimelogging is not enabled
[2024-06-23 00:57:13] 2024-06-23 07:57:05,613 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 00:57:13] 2024-06-23 07:57:07,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673384339264)>', '<ExcThread(monitor, started 139673091413760)>']
[2024-06-23 00:57:13] 2024-06-23 07:57:07,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 00:57:13] 2024-06-23 07:57:07,214 | INFO     | [monitor] control thread has ended
[2024-06-23 00:57:13] 2024-06-23 07:57:12,050 | INFO     | all workflow threads have been joined
[2024-06-23 00:57:13] 2024-06-23 07:57:12,050 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 00:57:13] 2024-06-23 07:57:12,051 | INFO     | traces error code: 0
[2024-06-23 00:57:13] 2024-06-23 07:57:12,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 00:57:13] 2024-06-23 07:57:12,227 [wrapper] ==== pilot stdout END ====
[2024-06-23 00:57:13] 2024-06-23 07:57:12,229 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 00:57:13] 2024-06-23 07:57:12,231 [wrapper] pilotpid: 63518
[2024-06-23 00:57:13] 2024-06-23 07:57:12,232 [wrapper] Pilot exit status: 0
[2024-06-23 00:57:13] 2024-06-23 07:57:12,242 [wrapper] pandaids: 6239602958
[2024-06-23 00:57:13] 2024-06-23 07:57:12,295 [wrapper] cleanup supervisor_pilot 222176 63519
[2024-06-23 00:57:13] 2024-06-23 07:57:12,297 [wrapper] Test setup, not cleaning
[2024-06-23 00:57:13] 2024-06-23 07:57:12,299 [wrapper] ==== wrapper stdout END ====
[2024-06-23 00:57:13] 2024-06-23 07:57:12,301 [wrapper] ==== wrapper stderr END ====
[2024-06-23 00:57:13] 2024-06-23 07:57:12,305 [wrapper] apfmon messages muted
[2024-06-23 00:57:13]  *** Error codes and diagnostics ***
[2024-06-23 00:57:13]     "exeErrorCode": 0,
[2024-06-23 00:57:13]     "exeErrorDiag": "",
[2024-06-23 00:57:13]     "pilotErrorCode": 0,
[2024-06-23 00:57:13]     "pilotErrorDiag": "",
[2024-06-23 00:57:13]  *** Listing of results directory ***
[2024-06-23 00:57:13] total 959616
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc    469766 Jun 21 04:33 pilot3.tar.gz
[2024-06-23 00:57:13] -rwx------ 1 boinc boinc     32308 Jun 21 04:37 runpilot2-wrapper.sh
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc      5654 Jun 21 04:37 queuedata.json
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc       100 Jun 22 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 00:57:13] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 18:02 run_atlas
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc       105 Jun 22 18:02 job.xml
[2024-06-23 00:57:13] -rw-r--r-- 2 boinc boinc 614925387 Jun 22 18:02 EVNT.38776190._000826.pool.root.1
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc      6629 Jun 22 18:02 init_data.xml
[2024-06-23 00:57:13] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:02 start_atlas.sh
[2024-06-23 00:57:13] drwxrwx--x 2 boinc boinc      4096 Jun 22 18:02 shared
[2024-06-23 00:57:13] -rw-r--r-- 2 boinc boinc    482527 Jun 22 18:02 input.tar.gz
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc         0 Jun 22 18:02 boinc_lockfile
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc      2652 Jun 22 18:02 pandaJob.out
[2024-06-23 00:57:13] -rw------- 1 boinc boinc       424 Jun 22 18:02 setup.sh.local
[2024-06-23 00:57:13] -rw------- 1 boinc boinc   1026074 Jun 22 18:02 agis_schedconf.cvmfs.json
[2024-06-23 00:57:13] -rw------- 1 boinc boinc   1321363 Jun 22 18:02 cric_ddmendpoints.json
[2024-06-23 00:57:13] drwx------ 4 boinc boinc      4096 Jun 22 18:02 pilot3
[2024-06-23 00:57:13] -rw------- 1 boinc boinc 358078596 Jun 23 00:55 HITS.38921001._063869.pool.root.1
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc       532 Jun 23 00:56 boinc_task_state.xml
[2024-06-23 00:57:13] -rw------- 1 boinc boinc      1068 Jun 23 00:56 memory_monitor_summary.json
[2024-06-23 00:57:13] -rw------- 1 boinc boinc        95 Jun 23 00:56 pilot_heartbeat.json
[2024-06-23 00:57:13] -rw------- 1 boinc boinc         0 Jun 23 00:56 agis_ddmendpoints.agis.ALL.json
[2024-06-23 00:57:13] -rw------- 1 boinc boinc    556580 Jun 23 00:56 log.38921001._063869.job.log.tgz.1
[2024-06-23 00:57:13] -rw------- 1 boinc boinc      7792 Jun 23 00:56 heartbeat.json
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc      8192 Jun 23 00:57 boinc_mmap_file
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc        28 Jun 23 00:57 wrapper_checkpoint.txt
[2024-06-23 00:57:13] -rw------- 1 boinc boinc      4591 Jun 23 00:57 pilotlog.txt
[2024-06-23 00:57:13] -rw------- 1 boinc boinc   2495768 Jun 23 00:57 log.38921001._063869.job.log.1
[2024-06-23 00:57:13] -rw------- 1 boinc boinc       357 Jun 23 00:57 output.list
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc       620 Jun 23 00:57 runtime_log
[2024-06-23 00:57:13] -rw------- 1 boinc boinc   3072000 Jun 23 00:57 result.tar.gz
[2024-06-23 00:57:13] -rw------- 1 boinc boinc       659 Jun 23 00:57 Zm7NDmXlre5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmfmKDmM0Bm8m.diag
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc     11287 Jun 23 00:57 runtime_log.err
[2024-06-23 00:57:13] -rw-r--r-- 1 boinc boinc     22020 Jun 23 00:57 stderr.txt
[2024-06-23 00:57:14] HITS file was successfully produced:
[2024-06-23 00:57:14] -rw------- 1 boinc boinc 358078596 Jun 23 00:55 shared/HITS.pool.root.1
[2024-06-23 00:57:14]  *** Contents of shared directory: ***
[2024-06-23 00:57:14] total 953704
[2024-06-23 00:57:14] -rw-r--r-- 2 boinc boinc 614925387 Jun 22 18:02 ATLAS.root_0
[2024-06-23 00:57:14] -rw-r--r-- 2 boinc boinc     17537 Jun 22 18:02 start_atlas.sh
[2024-06-23 00:57:14] -rw-r--r-- 2 boinc boinc    482527 Jun 22 18:02 input.tar.gz
[2024-06-23 00:57:14] -rw------- 1 boinc boinc 358078596 Jun 23 00:55 HITS.pool.root.1
[2024-06-23 00:57:14] -rw------- 1 boinc boinc   3072000 Jun 23 00:57 result.tar.gz
00:57:15 (59345): run_atlas exited; CPU time 85807.562144
00:57:15 (59345): called boinc_finish(0)

</stderr_txt>
]]>

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