Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-24 00:17:56 (10324): Detected: vboxwrapper 26206
2024-06-24 00:17:57 (10324): Detected: BOINC client v7.16.5
2024-06-24 00:17:57 (10324): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2024-06-24 00:17:57 (10324): Successfully copied 'init_data.xml' to the shared directory.
2024-06-24 00:17:58 (10324): Create VM. (boinc_4e44c2cd75007829, slot#3)
2024-06-24 00:17:58 (10324): Setting Memory Size for VM. (4400MB)
2024-06-24 00:17:59 (10324): Setting CPU Count for VM. (4)
2024-06-24 00:17:59 (10324): Setting Chipset Options for VM.
2024-06-24 00:17:59 (10324): Setting Graphics Controller Options for VM.
2024-06-24 00:17:59 (10324): Setting Boot Options for VM.
2024-06-24 00:18:00 (10324): Setting Network Configuration for NAT.
2024-06-24 00:18:00 (10324): Enabling VM Network Access.
2024-06-24 00:18:00 (10324): Disabling USB Support for VM.
2024-06-24 00:18:00 (10324): Disabling COM Port Support for VM.
2024-06-24 00:18:01 (10324): Disabling LPT Port Support for VM.
2024-06-24 00:18:01 (10324): Disabling Audio Support for VM.
2024-06-24 00:18:01 (10324): Disabling Clipboard Support for VM.
2024-06-24 00:18:01 (10324): Disabling Drag and Drop Support for VM.
2024-06-24 00:18:02 (10324): Adding storage controller(s) to VM.
2024-06-24 00:18:02 (10324): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-24 00:18:02 (10324): Adding VirtualBox Guest Additions to VM.
2024-06-24 00:18:03 (10324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-24 00:18:03 (10324): forwarding host port 59979 to guest port 80
2024-06-24 00:18:03 (10324): Enabling remote desktop for VM.
2024-06-24 00:18:04 (10324): Enabling shared directory for VM.
2024-06-24 00:18:04 (10324): Starting VM using VBoxManage interface. (boinc_4e44c2cd75007829, slot#3)
2024-06-24 00:18:09 (10324): Successfully started VM. (PID = '6996')
2024-06-24 00:18:09 (10324): Reporting VM Process ID to BOINC.
2024-06-24 00:18:09 (10324): Guest Log: BIOS: VirtualBox 5.2.44
2024-06-24 00:18:09 (10324): Guest Log: CPUID EDX: 0x178bfbff
2024-06-24 00:18:09 (10324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-24 00:18:09 (10324): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-24 00:18:09 (10324): Detected: Web Application Enabled (http://localhost:59979)
2024-06-24 00:18:09 (10324): Detected: Remote Desktop Enabled (localhost:59980)
2024-06-24 00:18:09 (10324): Preference change detected
2024-06-24 00:18:09 (10324): Setting CPU throttle for VM. (100%)
2024-06-24 00:18:09 (10324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-24 00:18:11 (10324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-24 00:18:11 (10324): Guest Log: BIOS: Booting from Hard Disk...
2024-06-24 00:18:14 (10324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-24 00:18:14 (10324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-24 00:18:14 (10324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-24 00:18:20 (10324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-24 00:18:20 (10324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-24 00:18:26 (10324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000199 main     Log opened 2024-06-24T00:18:25.265814000Z
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000324 main     OS Product: Linux
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000362 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000385 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000406 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000407 main     Process ID: 1301
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.000407 main     Package type: LINUX_64BITS_GENERIC
2024-06-24 00:18:26 (10324): Guest Log: 00:00:00.001883 main     5.2.32 r132073 started. Verbose level = 0
2024-06-24 00:18:26 (10324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-24 00:18:26 (10324): Guest Log: [INFO] Mounting shared directory
2024-06-24 00:18:27 (10324): Guest Log: [INFO] Checking for init_data.xml
2024-06-24 00:18:33 (10324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-24 00:18:33 (10324): Guest Log: [INFO] Detected branch: prod
2024-06-24 00:18:33 (10324): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-24 00:18:33 (10324): Guest Log: Copying input files
2024-06-24 00:18:36 (10324): Guest Log: 00:00:10.005252 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 789 235 279 000ns (GuestNow=1 719 177 516 034 274 000 ns GuestLast=1 719 188 305 269 553 000 ns fSetTimeLastLoop=true )
2024-06-24 00:18:38 (10324): Guest Log: Copied input files into RunAtlas.
2024-06-24 00:18:38 (10324): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-24 00:18:38 (10324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-24 00:18:38 (10324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-24 00:18:38 (10324): Guest Log: Further information can be found at the LHC@home message board.
2024-06-24 00:18:45 (10324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-24 00:18:46 (10324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-24 00:18:46 (10324): Guest Log: 2.6.3.0 1580 0 30144 134215 4 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-24 00:18:46 (10324): Guest Log: copied the webapp to /var/www
2024-06-24 00:18:46 (10324): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-24 00:18:46 (10324): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-24 00:18:47 (10324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-24 00:18:47 (10324): Guest Log:  *** Starting ATLAS job. (PandaID=6239588421 taskID=38921013) ***
2024-06-24 01:58:12 (10324): Status Report: Elapsed Time: '6000.000000'
2024-06-24 01:58:12 (10324): Status Report: CPU Time: '17077.703125'
2024-06-24 03:38:16 (10324): Status Report: Elapsed Time: '12000.000000'
2024-06-24 03:38:16 (10324): Status Report: CPU Time: '40973.765625'
2024-06-24 05:18:23 (10324): Status Report: Elapsed Time: '18000.000000'
2024-06-24 05:18:23 (10324): Status Report: CPU Time: '64875.781250'
2024-06-24 06:58:27 (10324): Status Report: Elapsed Time: '24000.000000'
2024-06-24 06:58:27 (10324): Status Report: CPU Time: '88772.062500'
2024-06-24 08:38:30 (10324): Status Report: Elapsed Time: '30000.000000'
2024-06-24 08:38:30 (10324): Status Report: CPU Time: '110904.671875'
2024-06-24 10:18:34 (10324): Status Report: Elapsed Time: '36000.000000'
2024-06-24 10:18:34 (10324): Status Report: CPU Time: '132353.109375'
2024-06-24 11:58:37 (10324): Status Report: Elapsed Time: '42000.000000'
2024-06-24 11:58:37 (10324): Status Report: CPU Time: '151934.171875'
2024-06-24 13:38:40 (10324): Status Report: Elapsed Time: '48000.000000'
2024-06-24 13:38:40 (10324): Status Report: CPU Time: '172074.046875'
2024-06-24 15:18:43 (10324): Status Report: Elapsed Time: '54000.000000'
2024-06-24 15:18:43 (10324): Status Report: CPU Time: '190686.328125'
2024-06-24 16:06:08 (10324): Guest Log:  *** Job finished ***
2024-06-24 16:06:08 (10324): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:00,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:01,422 | INFO     | [job] queue monitor thread has finished
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:02,130 | INFO     | [data] queue_monitor thread has finished
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:02,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454362249024)>', '<ExcThread(monitor, started 140453936617216)>']
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:03,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:03,167 | INFO     | [monitor] control thread has ended
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,589 | INFO     | all workflow threads have been joined
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,589 | INFO     | end of generic workflow (traces error code: 0)
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,589 | INFO     | traces error code: 0
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,708 [wrapper] ==== pilot stdout END ====
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,714 [wrapper] ==== wrapper stdout RESUME ====
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,720 [wrapper] pilotpid: 6466
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,725 [wrapper] Pilot exit status: 0
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,805 [wrapper] pandaids: 6239588421
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,849 [wrapper] cleanup supervisor_pilot 15300 6467
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,856 [wrapper] Test setup, not cleaning
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,862 [wrapper] ==== wrapper stdout END ====
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,867 [wrapper] ==== wrapper stderr END ====
2024-06-24 16:06:08 (10324): Guest Log: 2024-06-24 13:06:07,880 [wrapper] apfmon messages muted
2024-06-24 16:06:08 (10324): Guest Log:  *** Error codes and diagnostics ***
2024-06-24 16:06:08 (10324): Guest Log:     "exeErrorCode": 0,
2024-06-24 16:06:08 (10324): Guest Log:     "exeErrorDiag": "",
2024-06-24 16:06:08 (10324): Guest Log:     "pilotErrorCode": 0,
2024-06-24 16:06:08 (10324): Guest Log:     "pilotErrorDiag": "",
2024-06-24 16:06:08 (10324): Guest Log:  *** Listing of results directory ***
2024-06-24 16:06:08 (10324): Guest Log: total 356064
2024-06-24 16:06:08 (10324): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 10:05 pilot3.tar.gz
2024-06-24 16:06:08 (10324): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 10:07 queuedata.json
2024-06-24 16:06:08 (10324): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 10:08 runpilot2-wrapper.sh
2024-06-24 16:06:08 (10324): Guest Log: -rwxr-xr-x. 1 atlas atlas      8879 Jun 23 21:18 init_data.xml
2024-06-24 16:06:08 (10324): Guest Log: -rwxr-xr-x. 1 atlas atlas    482526 Jun 23 21:18 input.tar.gz
2024-06-24 16:06:08 (10324): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 23 21:18 start_atlas.sh
2024-06-24 16:06:08 (10324): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 23 21:18 EVNT.38776210._000583.pool.root.1 -> /data/./ATLAS.root_0
2024-06-24 16:06:08 (10324): Guest Log: -rw-r--r--. 1 atlas atlas      2645 Jun 23 21:18 pandaJob.out
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas       424 Jun 23 21:18 setup.sh.local
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas   1026178 Jun 23 21:20 agis_schedconf.cvmfs.json
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 23 21:20 cric_ddmendpoints.json
2024-06-24 16:06:08 (10324): Guest Log: drwx------. 4 atlas atlas      4096 Jun 23 21:20 pilot3
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas 346895478 Jun 24 13:03 HITS.38921013._051383.pool.root.1
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas      1031 Jun 24 13:03 memory_monitor_summary.json
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas         0 Jun 24 13:03 agis_ddmendpoints.agis.ALL.json
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas    734139 Jun 24 13:03 log.38921013._051383.job.log.tgz.1
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas        95 Jun 24 13:05 pilot_heartbeat.json
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas      7744 Jun 24 13:05 heartbeat.json
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 24 13:06 pilotlog.txt
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas   6385668 Jun 24 13:06 log.38921013._051383.job.log.1
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas       357 Jun 24 13:06 output.list
2024-06-24 16:06:08 (10324): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 24 13:06 runtime_log
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas   7137280 Jun 24 13:06 result.tar.gz
2024-06-24 16:06:08 (10324): Guest Log: -rw-r--r--. 1 atlas atlas     10967 Jun 24 13:06 runtime_log.err
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas       663 Jun 24 13:06 lIBNDmKNqe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmbcmKDm1wc9Zn.diag
2024-06-24 16:06:08 (10324): Guest Log: Looking for outputfile HITS.38921013._051383.pool.root.1
2024-06-24 16:06:08 (10324): Guest Log: HITS file was successfully produced
2024-06-24 16:06:08 (10324): Guest Log: -rw-------. 1 atlas atlas 346895478 Jun 24 13:03 /home/atlas/RunAtlas/HITS.38921013._051383.pool.root.1
2024-06-24 16:06:10 (10324): Guest Log: Successfully finished the ATLAS job!
2024-06-24 16:06:10 (10324): Guest Log: Copying the results back to the shared directory!
2024-06-24 16:06:10 (10324): Guest Log:  *** Contents of shared directory: ***
2024-06-24 16:06:10 (10324): Guest Log: total 874472
2024-06-24 16:06:10 (10324): Guest Log: -rwxrwxrwx. 1 root root 540905463 Jun 23 21:17 ATLAS.root_0
2024-06-24 16:06:10 (10324): Guest Log: -rwxrwxrwx. 1 root root 346895478 Jun 24 13:06 HITS.pool.root.1
2024-06-24 16:06:10 (10324): Guest Log: -rwxrwxrwx. 1 root root      8879 Jun 23 21:17 init_data.xml
2024-06-24 16:06:10 (10324): Guest Log: -rwxrwxrwx. 1 root root    482526 Jun 21 15:03 input.tar.gz
2024-06-24 16:06:10 (10324): Guest Log: -rwxrwxrwx. 1 root root   7137280 Jun 24 13:06 result.tar.gz
2024-06-24 16:06:10 (10324): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 21 15:03 start_atlas.sh
2024-06-24 16:06:10 (10324): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-24 16:06:10 (10324): VM Completion File Detected.
2024-06-24 16:06:10 (10324): Powering off VM.
2024-06-24 16:06:11 (10324): Successfully stopped VM.
2024-06-24 16:06:11 (10324): Deregistering VM. (boinc_4e44c2cd75007829, slot#3)
2024-06-24 16:06:11 (10324): Removing network bandwidth throttle group from VM.
2024-06-24 16:06:11 (10324): Removing VM from VirtualBox.
16:06:16 (10324): called boinc_finish(0)

</stderr_txt>
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