Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-23 16:18:09 (15404): Detected: vboxwrapper 26206
2024-06-23 16:18:09 (15404): Detected: BOINC client v7.16.5
2024-06-23 16:18:09 (15404): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2024-06-23 16:18:09 (15404): Successfully copied 'init_data.xml' to the shared directory.
2024-06-23 16:18:10 (15404): Create VM. (boinc_51fc429c5e8016ec, slot#4)
2024-06-23 16:18:10 (15404): Setting Memory Size for VM. (4400MB)
2024-06-23 16:18:11 (15404): Setting CPU Count for VM. (4)
2024-06-23 16:18:11 (15404): Setting Chipset Options for VM.
2024-06-23 16:18:11 (15404): Setting Graphics Controller Options for VM.
2024-06-23 16:18:11 (15404): Setting Boot Options for VM.
2024-06-23 16:18:12 (15404): Setting Network Configuration for NAT.
2024-06-23 16:18:12 (15404): Enabling VM Network Access.
2024-06-23 16:18:12 (15404): Disabling USB Support for VM.
2024-06-23 16:18:12 (15404): Disabling COM Port Support for VM.
2024-06-23 16:18:13 (15404): Disabling LPT Port Support for VM.
2024-06-23 16:18:13 (15404): Disabling Audio Support for VM.
2024-06-23 16:18:13 (15404): Disabling Clipboard Support for VM.
2024-06-23 16:18:13 (15404): Disabling Drag and Drop Support for VM.
2024-06-23 16:18:14 (15404): Adding storage controller(s) to VM.
2024-06-23 16:18:14 (15404): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-23 16:18:15 (15404): Adding VirtualBox Guest Additions to VM.
2024-06-23 16:18:15 (15404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-23 16:18:15 (15404): forwarding host port 56725 to guest port 80
2024-06-23 16:18:15 (15404): Enabling remote desktop for VM.
2024-06-23 16:18:16 (15404): Enabling shared directory for VM.
2024-06-23 16:18:16 (15404): Starting VM using VBoxManage interface. (boinc_51fc429c5e8016ec, slot#4)
2024-06-23 16:18:21 (15404): Successfully started VM. (PID = '652')
2024-06-23 16:18:21 (15404): Reporting VM Process ID to BOINC.
2024-06-23 16:18:21 (15404): Guest Log: BIOS: VirtualBox 5.2.44
2024-06-23 16:18:21 (15404): Guest Log: CPUID EDX: 0x178bfbff
2024-06-23 16:18:21 (15404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-23 16:18:21 (15404): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-23 16:18:21 (15404): Detected: Web Application Enabled (http://localhost:56725)
2024-06-23 16:18:21 (15404): Detected: Remote Desktop Enabled (localhost:56726)
2024-06-23 16:18:21 (15404): Preference change detected
2024-06-23 16:18:21 (15404): Setting CPU throttle for VM. (100%)
2024-06-23 16:18:21 (15404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-23 16:18:23 (15404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-23 16:18:23 (15404): Guest Log: BIOS: Booting from Hard Disk...
2024-06-23 16:18:26 (15404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-23 16:18:26 (15404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-23 16:18:26 (15404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-23 16:18:32 (15404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-23 16:18:32 (15404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-23 16:18:39 (15404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000176 main     Log opened 2024-06-23T16:18:36.890436000Z
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000300 main     OS Product: Linux
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000344 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000377 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000405 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000406 main     Process ID: 1303
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.000407 main     Package type: LINUX_64BITS_GENERIC
2024-06-23 16:18:39 (15404): Guest Log: 00:00:00.001636 main     5.2.32 r132073 started. Verbose level = 0
2024-06-23 16:18:39 (15404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-23 16:18:39 (15404): Guest Log: [INFO] Mounting shared directory
2024-06-23 16:18:39 (15404): Guest Log: [INFO] Checking for init_data.xml
2024-06-23 16:18:41 (15404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-23 16:18:41 (15404): Guest Log: [INFO] Detected branch: prod
2024-06-23 16:18:42 (15404): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-23 16:18:42 (15404): Guest Log: Copying input files
2024-06-23 16:18:46 (15404): Guest Log: Copied input files into RunAtlas.
2024-06-23 16:18:46 (15404): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-23 16:18:46 (15404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-23 16:18:46 (15404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-23 16:18:46 (15404): Guest Log: Further information can be found at the LHC@home message board.
2024-06-23 16:18:49 (15404): Guest Log: 00:00:10.005448 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 189 187 000ns (GuestNow=1 719 148 728 705 740 000 ns GuestLast=1 719 159 516 894 927 000 ns fSetTimeLastLoop=true )
2024-06-23 16:20:06 (15404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-23 16:20:06 (15404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-23 16:20:06 (15404): Guest Log: 2.6.3.0 1579 1 30200 134203 4 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-23 16:20:07 (15404): Guest Log: copied the webapp to /var/www
2024-06-23 16:20:07 (15404): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-23 16:20:07 (15404): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-23 16:20:07 (15404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-23 16:20:07 (15404): Guest Log:  *** Starting ATLAS job. (PandaID=6239514618 taskID=38921013) ***
2024-06-23 17:58:25 (15404): Status Report: Elapsed Time: '6000.000000'
2024-06-23 17:58:25 (15404): Status Report: CPU Time: '17734.500000'
2024-06-23 19:38:28 (15404): Status Report: Elapsed Time: '12000.000000'
2024-06-23 19:38:28 (15404): Status Report: CPU Time: '39349.671875'
2024-06-23 21:18:32 (15404): Status Report: Elapsed Time: '18000.000000'
2024-06-23 21:18:32 (15404): Status Report: CPU Time: '62409.390625'
2024-06-23 22:58:35 (15404): Status Report: Elapsed Time: '24000.000000'
2024-06-23 22:58:35 (15404): Status Report: CPU Time: '86338.140625'
2024-06-24 00:38:39 (15404): Status Report: Elapsed Time: '30000.000000'
2024-06-24 00:38:39 (15404): Status Report: CPU Time: '109801.843750'
2024-06-24 02:18:43 (15404): Status Report: Elapsed Time: '36000.000000'
2024-06-24 02:18:43 (15404): Status Report: CPU Time: '132252.328125'
2024-06-24 03:58:47 (15404): Status Report: Elapsed Time: '42000.000000'
2024-06-24 03:58:47 (15404): Status Report: CPU Time: '156166.968750'
2024-06-24 05:38:54 (15404): Status Report: Elapsed Time: '48000.000000'
2024-06-24 05:38:54 (15404): Status Report: CPU Time: '180093.375000'
2024-06-24 07:06:59 (15404): Guest Log:  *** Job finished ***
2024-06-24 07:06:59 (15404): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:48,799 | INFO     | [data] copytool_out thread has finished
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:48,962 | INFO     | [job] queue monitor thread has finished
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:51,173 | INFO     | [data] queue_monitor thread has finished
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:53,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232132151104)>', '<ExcThread(monitor, started 140231462340352)>']
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:53,645 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:53,645 | INFO     | [monitor] control thread has ended
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,228 | INFO     | all workflow threads have been joined
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,228 | INFO     | end of generic workflow (traces error code: 0)
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,229 | INFO     | traces error code: 0
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,343 [wrapper] ==== pilot stdout END ====
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,349 [wrapper] ==== wrapper stdout RESUME ====
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,355 [wrapper] pilotpid: 6499
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,361 [wrapper] Pilot exit status: 0
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,433 [wrapper] pandaids: 6239514618
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,470 [wrapper] cleanup supervisor_pilot 10689 6500
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,476 [wrapper] Test setup, not cleaning
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,482 [wrapper] ==== wrapper stdout END ====
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,487 [wrapper] ==== wrapper stderr END ====
2024-06-24 07:06:59 (15404): Guest Log: 2024-06-24 04:06:58,498 [wrapper] apfmon messages muted
2024-06-24 07:06:59 (15404): Guest Log:  *** Error codes and diagnostics ***
2024-06-24 07:06:59 (15404): Guest Log:     "exeErrorCode": 0,
2024-06-24 07:06:59 (15404): Guest Log:     "exeErrorDiag": "",
2024-06-24 07:06:59 (15404): Guest Log:     "pilotErrorCode": 0,
2024-06-24 07:06:59 (15404): Guest Log:     "pilotErrorDiag": "",
2024-06-24 07:06:59 (15404): Guest Log:  *** Listing of results directory ***
2024-06-24 07:06:59 (15404): Guest Log: total 352300
2024-06-24 07:06:59 (15404): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 07:38 queuedata.json
2024-06-24 07:06:59 (15404): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 07:38 runpilot2-wrapper.sh
2024-06-24 07:06:59 (15404): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 07:38 pilot3.tar.gz
2024-06-24 07:06:59 (15404): Guest Log: -rwxr-xr-x. 1 atlas atlas      8879 Jun 23 13:18 init_data.xml
2024-06-24 07:06:59 (15404): Guest Log: -rwxr-xr-x. 1 atlas atlas    482527 Jun 23 13:18 input.tar.gz
2024-06-24 07:06:59 (15404): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 23 13:18 start_atlas.sh
2024-06-24 07:06:59 (15404): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 23 13:18 EVNT.38776210._000459.pool.root.1 -> /data/./ATLAS.root_0
2024-06-24 07:06:59 (15404): Guest Log: -rw-r--r--. 1 atlas atlas      2646 Jun 23 13:20 pandaJob.out
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas       424 Jun 23 13:20 setup.sh.local
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas   1025376 Jun 23 13:22 agis_schedconf.cvmfs.json
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 23 13:22 cric_ddmendpoints.json
2024-06-24 07:06:59 (15404): Guest Log: drwx------. 4 atlas atlas      4096 Jun 23 13:22 pilot3
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas 344258748 Jun 24 04:05 HITS.38921013._051126.pool.root.1
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas        95 Jun 24 04:06 pilot_heartbeat.json
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas      1031 Jun 24 04:06 memory_monitor_summary.json
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas         0 Jun 24 04:06 agis_ddmendpoints.agis.ALL.json
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas    714894 Jun 24 04:06 log.38921013._051126.job.log.tgz.1
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas      7743 Jun 24 04:06 heartbeat.json
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 24 04:06 pilotlog.txt
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas   5799054 Jun 24 04:06 log.38921013._051126.job.log.1
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas       357 Jun 24 04:06 output.list
2024-06-24 07:06:59 (15404): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 24 04:06 runtime_log
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas   6533120 Jun 24 04:06 result.tar.gz
2024-06-24 07:06:59 (15404): Guest Log: -rw-r--r--. 1 atlas atlas     10967 Jun 24 04:06 runtime_log.err
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas       663 Jun 24 04:06 MBDMDmT2ne5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmUvXKDm9uQTNm.diag
2024-06-24 07:06:59 (15404): Guest Log: Looking for outputfile HITS.38921013._051126.pool.root.1
2024-06-24 07:06:59 (15404): Guest Log: HITS file was successfully produced
2024-06-24 07:06:59 (15404): Guest Log: -rw-------. 1 atlas atlas 344258748 Jun 24 04:05 /home/atlas/RunAtlas/HITS.38921013._051126.pool.root.1
2024-06-24 07:07:01 (15404): Guest Log: Successfully finished the ATLAS job!
2024-06-24 07:07:01 (15404): Guest Log: Copying the results back to the shared directory!
2024-06-24 07:07:01 (15404): Guest Log:  *** Contents of shared directory: ***
2024-06-24 07:07:01 (15404): Guest Log: total 871468
2024-06-24 07:07:01 (15404): Guest Log: -rwxrwxrwx. 1 root root 541069583 Jun 23 13:18 ATLAS.root_0
2024-06-24 07:07:01 (15404): Guest Log: -rwxrwxrwx. 1 root root 344258748 Jun 24 04:07 HITS.pool.root.1
2024-06-24 07:07:01 (15404): Guest Log: -rwxrwxrwx. 1 root root      8879 Jun 23 13:18 init_data.xml
2024-06-24 07:07:01 (15404): Guest Log: -rwxrwxrwx. 1 root root    482527 Jun 21 12:49 input.tar.gz
2024-06-24 07:07:01 (15404): Guest Log: -rwxrwxrwx. 1 root root   6533120 Jun 24 04:07 result.tar.gz
2024-06-24 07:07:01 (15404): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 21 12:49 start_atlas.sh
2024-06-24 07:07:01 (15404): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-24 07:07:01 (15404): VM Completion File Detected.
2024-06-24 07:07:01 (15404): Powering off VM.
2024-06-24 07:07:02 (15404): Successfully stopped VM.
2024-06-24 07:07:02 (15404): Deregistering VM. (boinc_51fc429c5e8016ec, slot#4)
2024-06-24 07:07:02 (15404): Removing network bandwidth throttle group from VM.
2024-06-24 07:07:02 (15404): Removing VM from VirtualBox.
07:07:07 (15404): called boinc_finish(0)

</stderr_txt>
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