Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:31:30 (59384): wrapper (7.7.26015): starting
04:31:30 (59384): wrapper: running run_atlas (--nthreads 2)
[2024-06-21 04:31:30] Arguments: --nthreads 2
[2024-06-21 04:31:30] Threads: 2
[2024-06-21 04:31:30] Checking for CVMFS
[2024-06-21 04:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 04:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 04:31:30] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 04:31:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 04:31:31] 2.11.3.0 6254 2 44768 134126 1 187 536670 6144001 507 130560 0 127571 99.079 222269 1803 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.188.245:3126 1
[2024-06-21 04:31:31] CVMFS is ok
[2024-06-21 04:31:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 04:31:31] Checking for apptainer binary...
[2024-06-21 04:31:31] apptainer is not installed, using version from CVMFS
[2024-06-21 04:31:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 04:31:31] um780
[2024-06-21 04:31:31] apptainer works
[2024-06-21 04:31:31] Set ATHENA_PROC_NUMBER=2
[2024-06-21 04:31:31] Set ATHENA_CORE_NUMBER=2
[2024-06-21 04:31:31] Starting ATLAS job with PandaID=6239410554
[2024-06-21 04:31:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 11:42:09]  *** The last 200 lines of the pilot log: ***
[2024-06-21 11:42:09] 2024-06-21 18:41:49,120 | INFO     | intersect: -13760430300.677391
[2024-06-21 11:42:09] 2024-06-21 18:41:49,120 | INFO     | chi2: 3.5337552353924404
[2024-06-21 11:42:09] 2024-06-21 18:41:49,120 | INFO     | current chi2=3.5337552353924404 (change=50.51487235623664 %)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,120 | INFO     | model: linear, x: [1718970124.0, 1718970185.0, 1718970246.0, 1718970307.0, 1718970368.0, 1718970429.0, 1718970490.0, 1718970551.0, 1718970612.0, 1718970673.0, 1718
[2024-06-21 11:42:09] 2024-06-21 18:41:49,120 | INFO     | sum of square deviations: 21843691422.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,121 | INFO     | sum of deviations: 98854114615.99997
[2024-06-21 11:42:09] 2024-06-21 18:41:49,121 | INFO     | mean x: 1718982690.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,121 | INFO     | mean y: 2292261.871670702
[2024-06-21 11:42:09] 2024-06-21 18:41:49,121 | INFO     | -- intersect: -7777002390.177637
[2024-06-21 11:42:09] 2024-06-21 18:41:49,121 | INFO     | intersect: -7777002390.177637
[2024-06-21 11:42:09] 2024-06-21 18:41:49,122 | INFO     | chi2: 1.8655470919180555
[2024-06-21 11:42:09] 2024-06-21 18:41:49,122 | INFO     | current chi2=1.8655470919180555 (change=47.207801116681544 %)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,122 | INFO     | model: linear, x: [1718970429.0, 1718970490.0, 1718970551.0, 1718970612.0, 1718970673.0, 1718970734.0, 1718970795.0, 1718970856.0, 1718970917.0, 1718970978.0, 1718
[2024-06-21 11:42:09] 2024-06-21 18:41:49,122 | INFO     | sum of square deviations: 21059899982.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | sum of deviations: 24301013195.499996
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | mean x: 1718982842.5
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | mean y: 2306767.713235294
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | -- intersect: -1981227093.9923851
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | intersect: -1981227093.9923851
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | chi2: 0.5083110706726471
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | current chi2=0.5083110706726471 (change=72.75270761725832 %)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | model: linear, x: [1718970734.0, 1718970795.0, 1718970856.0, 1718970917.0, 1718970978.0, 1718971039.0, 1718971100.0, 1718971161.0, 1718971222.0, 1718971283.0, 1718
[2024-06-21 11:42:09] 2024-06-21 18:41:49,123 | INFO     | sum of square deviations: 20295085642.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | sum of deviations: -11709046501.999996
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | mean x: 1718982995.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | mean y: 2313919.230769231
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | -- intersect: 994063950.7235521
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | intersect: 994063950.7235521
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | chi2: 0.059138001846585894
[2024-06-21 11:42:09] 2024-06-21 18:41:49,124 | INFO     | current chi2=0.059138001846585894 (change=88.36578519363573 %)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,125 | INFO     | model: linear, x: [1718971039.0, 1718971100.0, 1718971161.0, 1718971222.0, 1718971283.0, 1718971344.0, 1718971405.0, 1718971466.0, 1718971527.0, 1718971588.0, 1718
[2024-06-21 11:42:09] 2024-06-21 18:41:49,125 | INFO     | sum of square deviations: 19549015839.5
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | sum of deviations: -18210265462.000008
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | mean x: 1718983147.5
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | mean y: 2315240.32160804
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | -- intersect: 1603579452.1715662
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | intersect: 1603579452.1715662
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | chi2: 0.03853975455390214
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | current chi2=0.03853975455390214 (change=34.83081377372055 %)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | model: linear, x: [1718971344.0, 1718971405.0, 1718971466.0, 1718971527.0, 1718971588.0, 1718971649.0, 1718971710.0, 1718971771.0, 1718971832.0, 1718971893.0, 1718
[2024-06-21 11:42:09] 2024-06-21 18:41:49,126 | INFO     | sum of square deviations: 18821458012.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | sum of deviations: -17276360341.999996
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | mean x: 1718983300.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | mean y: 2315044.081424936
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | -- intersect: 1580182969.8152266
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | intersect: 1580182969.8152266
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | chi2: 0.038497198225026966
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | current chi2=0.038497198225026966 (change=0.11042189906958665 %)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | left removable region: 60
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | model: linear, x: [1718973174.0, 1718973235.0, 1718973296.0, 1718973357.0, 1718973418.0, 1718973479.0, 1718973540.0, 1718973601.0, 1718973662.0, 1718973723.0, 1718
[2024-06-21 11:42:09] 2024-06-21 18:41:49,127 | INFO     | sum of square deviations: 14108461738.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | sum of deviations: -478623994.99999905
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | mean x: 1718984032.0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | mean y: 2310702.2717086836
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | -- intersect: 60626556.97052704
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | intersect: 60626556.97052704
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | chi2: 0.02520093603295068
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | -- intersect: 60626556.97052704
[2024-06-21 11:42:09] 2024-06-21 18:41:49,128 | INFO     | current memory leak: -0.03 B/s (using 357 data points, chi2=0.03)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | ..............................
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . Timing measurements:
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . get job = 0 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . initial setup = 2 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . payload setup = 2 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . stage-in = 0 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . payload execution = 25787 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . stage-out = 1 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | . log creation = 0 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,129 | INFO     | ..............................
[2024-06-21 11:42:09] 2024-06-21 18:41:49,153 | INFO     | 
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | job summary report
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | --------------------------------------------------
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | PanDA job id: 6239410554
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | task id: 38921013
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | errors: (none)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | pilot state: finished 
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | transexitcode: 0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | exeerrorcode: 0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | exeerrordiag: 
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | exitcode: 0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | exitmsg: OK
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | cpuconsumptiontime: 49084 s
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | nevents: 400
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | neventsw: 0
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | pid: 70427
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | pgrp: 70427
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | corecount: 2
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | event service: False
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | sizes: {0: 2387094, 2: 2387300, 11: 2387328, 25793: 2423415, 25795: 2432389, 25796: 2432445, 25800: 2432743}
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | --------------------------------------------------
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | 
[2024-06-21 11:42:09] 2024-06-21 18:41:49,154 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | job 6239410554 has completed (purged errors)
[2024-06-21 11:42:09] 2024-06-21 18:41:49,165 | INFO     | overall cleanup function is called
[2024-06-21 11:42:09] 2024-06-21 18:41:50,172 | INFO     | --- collectZombieJob: --- 10, [70427]
[2024-06-21 11:42:09] 2024-06-21 18:41:50,172 | INFO     | zombie collector waiting for pid 70427
[2024-06-21 11:42:09] 2024-06-21 18:41:50,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 11:42:09] 2024-06-21 18:41:51,178 | INFO     | collected zombie processes
[2024-06-21 11:42:09] 2024-06-21 18:41:51,178 | INFO     | will now attempt to kill all subprocesses of pid=70427
[2024-06-21 11:42:09] 2024-06-21 18:41:51,227 | INFO     | process IDs to be killed: [70427] (in reverse order)
[2024-06-21 11:42:09] 2024-06-21 18:41:51,250 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 11:42:09] 2024-06-21 18:41:51,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 11:42:09] 2024-06-21 18:41:51,251 | INFO     | did not find any defunct processes belonging to 70427
[2024-06-21 11:42:09] 2024-06-21 18:41:51,252 | INFO     | did not find any defunct processes belonging to 70427
[2024-06-21 11:42:09] 2024-06-21 18:41:51,252 | INFO     | ready for new job
[2024-06-21 11:42:09] 2024-06-21 18:41:51,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 11:42:09] 2024-06-21 18:41:51,254 | INFO     | *************************************
[2024-06-21 11:42:09] 2024-06-21 18:41:51,254 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 11:42:09] 2024-06-21 18:41:51,254 | INFO     | *************************************
[2024-06-21 11:42:09] 2024-06-21 18:41:51,254 | INFO     | 
[2024-06-21 11:42:09] 2024-06-21 18:41:51,254 | INFO     | architecture information:
[2024-06-21 11:42:09] 2024-06-21 18:41:51,254 | INFO     | executing command: cat /etc/os-release
[2024-06-21 11:42:09] 2024-06-21 18:41:51,262 | INFO     | cat /etc/os-release:
[2024-06-21 11:42:09] NAME="CentOS Linux"
[2024-06-21 11:42:09] VERSION="7 (Core)"
[2024-06-21 11:42:09] ID="centos"
[2024-06-21 11:42:09] ID_LIKE="rhel fedora"
[2024-06-21 11:42:09] VERSION_ID="7"
[2024-06-21 11:42:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 11:42:09] ANSI_COLOR="0;31"
[2024-06-21 11:42:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 11:42:09] HOME_URL="https://www.centos.org/"
[2024-06-21 11:42:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 11:42:09] 
[2024-06-21 11:42:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 11:42:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 11:42:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 11:42:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 11:42:09] 
[2024-06-21 11:42:09] 2024-06-21 18:41:51,262 | INFO     | *************************************
[2024-06-21 11:42:09] 2024-06-21 18:41:51,765 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2024-06-21 11:42:09] 2024-06-21 18:41:51,774 | INFO     | sufficient remaining disk space (154060980224 B)
[2024-06-21 11:42:09] 2024-06-21 18:41:51,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 11:42:09] 2024-06-21 18:41:51,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 11:42:09] 2024-06-21 18:41:51,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 11:42:09] 2024-06-21 18:41:52,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 11:42:09] 2024-06-21 18:41:52,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:42:09] 2024-06-21 18:41:52,275 | INFO     | aborting loop
[2024-06-21 11:42:09] 2024-06-21 18:41:52,605 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 11:42:09] 2024-06-21 18:41:52,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 11:42:09] 2024-06-21 18:41:52,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 11:42:09] 2024-06-21 18:41:52,617 | INFO     | all data control threads have been joined
[2024-06-21 11:42:09] 2024-06-21 18:41:52,721 | INFO     | all payload control threads have been joined
[2024-06-21 11:42:09] 2024-06-21 18:41:52,779 | INFO     | [job] retrieve thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,063 | INFO     | [data] copytool_in thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,082 | INFO     | [payload] validate_post thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,221 | INFO     | all job control threads have been joined
[2024-06-21 11:42:09] 2024-06-21 18:41:53,280 | INFO     | [job] job monitor thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,623 | INFO     | [data] control thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,726 | INFO     | [payload] control thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,873 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,899 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:53,931 | INFO     | [job] validate thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:54,019 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:54,059 | INFO     | [data] copytool_out thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:54,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 11:42:09] 2024-06-21 18:41:54,160 | INFO     | [payload] failed_post thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:54,226 | INFO     | [job] control thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:55,161 | INFO     | [job] queue monitor thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:41:55,778 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:42:02,636 | INFO     | job.realtimelogging is not enabled
[2024-06-21 11:42:09] 2024-06-21 18:42:03,642 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 11:42:09] 2024-06-21 18:42:04,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123586663741248)>', '<ExcThread(monitor, started 123586029291264)>']
[2024-06-21 11:42:09] 2024-06-21 18:42:04,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 11:42:09] 2024-06-21 18:42:04,667 | INFO     | [monitor] control thread has ended
[2024-06-21 11:42:09] 2024-06-21 18:42:09,032 | INFO     | all workflow threads have been joined
[2024-06-21 11:42:09] 2024-06-21 18:42:09,032 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 11:42:09] 2024-06-21 18:42:09,032 | INFO     | traces error code: 0
[2024-06-21 11:42:09] 2024-06-21 18:42:09,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 11:42:09] 2024-06-21 18:42:09,073 [wrapper] ==== pilot stdout END ====
[2024-06-21 11:42:09] 2024-06-21 18:42:09,076 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 11:42:09] 2024-06-21 18:42:09,077 [wrapper] pilotpid: 63682
[2024-06-21 11:42:09] 2024-06-21 18:42:09,079 [wrapper] Pilot exit status: 0
[2024-06-21 11:42:09] 2024-06-21 18:42:09,083 [wrapper] pandaids: 6239410554
[2024-06-21 11:42:09] 2024-06-21 18:42:09,098 [wrapper] cleanup supervisor_pilot  304182 63683
[2024-06-21 11:42:09] 2024-06-21 18:42:09,099 [wrapper] Test setup, not cleaning
[2024-06-21 11:42:09] 2024-06-21 18:42:09,100 [wrapper] ==== wrapper stdout END ====
[2024-06-21 11:42:09] 2024-06-21 18:42:09,102 [wrapper] ==== wrapper stderr END ====
[2024-06-21 11:42:09] 2024-06-21 18:42:09,104 [wrapper] apfmon messages muted
[2024-06-21 11:42:09]  *** Error codes and diagnostics ***
[2024-06-21 11:42:09]     "exeErrorCode": 0,
[2024-06-21 11:42:09]     "exeErrorDiag": "",
[2024-06-21 11:42:09]     "pilotErrorCode": 0,
[2024-06-21 11:42:09]     "pilotErrorDiag": "",
[2024-06-21 11:42:09]  *** Listing of results directory ***
[2024-06-21 11:42:09] total 879828
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc    469766 Jun 20 23:04 pilot3.tar.gz
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc      5654 Jun 20 23:21 queuedata.json
[2024-06-21 11:42:09] -rwx------ 1 boinc boinc     32308 Jun 20 23:22 runpilot2-wrapper.sh
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc       100 Jun 21 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 11:42:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 04:31 run_atlas
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc       105 Jun 21 04:31 job.xml
[2024-06-21 11:42:09] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:31 start_atlas.sh
[2024-06-21 11:42:09] drwxrwx--x 2 boinc boinc      4096 Jun 21 04:31 shared
[2024-06-21 11:42:09] -rw-r--r-- 2 boinc boinc    482524 Jun 21 04:31 input.tar.gz
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc      9964 Jun 21 04:31 init_data.xml
[2024-06-21 11:42:09] -rw-r--r-- 2 boinc boinc 543132744 Jun 21 04:31 EVNT.38776210._000938.pool.root.1
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc         0 Jun 21 04:31 boinc_lockfile
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc      2644 Jun 21 04:31 pandaJob.out
[2024-06-21 11:42:09] -rw------- 1 boinc boinc       424 Jun 21 04:31 setup.sh.local
[2024-06-21 11:42:09] -rw------- 1 boinc boinc   1023843 Jun 21 04:31 agis_schedconf.cvmfs.json
[2024-06-21 11:42:09] -rw------- 1 boinc boinc   1321251 Jun 21 04:31 cric_ddmendpoints.json
[2024-06-21 11:42:09] drwx------ 4 boinc boinc      4096 Jun 21 04:31 pilot3
[2024-06-21 11:42:09] -rw------- 1 boinc boinc 347327169 Jun 21 11:41 HITS.38921013._051024.pool.root.1
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc       531 Jun 21 11:41 boinc_task_state.xml
[2024-06-21 11:42:09] -rw------- 1 boinc boinc        95 Jun 21 11:41 pilot_heartbeat.json
[2024-06-21 11:42:09] -rw------- 1 boinc boinc      1035 Jun 21 11:41 memory_monitor_summary.json
[2024-06-21 11:42:09] -rw------- 1 boinc boinc         0 Jun 21 11:41 agis_ddmendpoints.agis.ALL.json
[2024-06-21 11:42:09] -rw------- 1 boinc boinc    419671 Jun 21 11:41 log.38921013._051024.job.log.tgz.1
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc      8192 Jun 21 11:41 boinc_mmap_file
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc        28 Jun 21 11:41 wrapper_checkpoint.txt
[2024-06-21 11:42:09] -rw------- 1 boinc boinc      7696 Jun 21 11:41 heartbeat.json
[2024-06-21 11:42:09] -rw------- 1 boinc boinc      4291 Jun 21 11:42 pilotlog.txt
[2024-06-21 11:42:09] -rw------- 1 boinc boinc   3051656 Jun 21 11:42 log.38921013._051024.job.log.1
[2024-06-21 11:42:09] -rw------- 1 boinc boinc       357 Jun 21 11:42 output.list
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc       620 Jun 21 11:42 runtime_log
[2024-06-21 11:42:09] -rw------- 1 boinc boinc   3491840 Jun 21 11:42 result.tar.gz
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc     11100 Jun 21 11:42 runtime_log.err
[2024-06-21 11:42:09] -rw------- 1 boinc boinc       642 Jun 21 11:42 bDiKDm4pme5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmEQmKDmZNmton.diag
[2024-06-21 11:42:09] -rw-r--r-- 1 boinc boinc     21256 Jun 21 11:42 stderr.txt
[2024-06-21 11:42:09] HITS file was successfully produced:
[2024-06-21 11:42:09] -rw------- 1 boinc boinc 347327169 Jun 21 11:41 shared/HITS.pool.root.1
[2024-06-21 11:42:09]  *** Contents of shared directory: ***
[2024-06-21 11:42:09] total 873504
[2024-06-21 11:42:09] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:31 start_atlas.sh
[2024-06-21 11:42:09] -rw-r--r-- 2 boinc boinc    482524 Jun 21 04:31 input.tar.gz
[2024-06-21 11:42:09] -rw-r--r-- 2 boinc boinc 543132744 Jun 21 04:31 ATLAS.root_0
[2024-06-21 11:42:09] -rw------- 1 boinc boinc 347327169 Jun 21 11:41 HITS.pool.root.1
[2024-06-21 11:42:09] -rw------- 1 boinc boinc   3491840 Jun 21 11:42 result.tar.gz
11:42:11 (59384): run_atlas exited; CPU time 48971.132357
11:42:11 (59384): called boinc_finish(0)

</stderr_txt>
]]>

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