Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 22:55:43 (56582): Detected: vboxwrapper 26206
2024-06-21 22:55:43 (56582): Detected: BOINC client v7.24.1
2024-06-21 22:55:43 (56582): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-21 22:55:43 (56582): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 22:55:43 (56582): Create VM. (boinc_e2d750f9624eefff, slot#0)
2024-06-21 22:55:44 (56582): Setting Memory Size for VM. (4800MB)
2024-06-21 22:55:44 (56582): Setting CPU Count for VM. (8)
2024-06-21 22:55:44 (56582): Setting Chipset Options for VM.
2024-06-21 22:55:44 (56582): Setting Graphics Controller Options for VM.
2024-06-21 22:55:44 (56582): Setting Boot Options for VM.
2024-06-21 22:55:44 (56582): Setting Network Configuration for NAT.
2024-06-21 22:55:44 (56582): Enabling VM Network Access.
2024-06-21 22:55:44 (56582): Disabling USB Support for VM.
2024-06-21 22:55:44 (56582): Disabling COM Port Support for VM.
2024-06-21 22:55:44 (56582): Disabling LPT Port Support for VM.
2024-06-21 22:55:44 (56582): Disabling Audio Support for VM.
2024-06-21 22:55:44 (56582): Disabling Clipboard Support for VM.
2024-06-21 22:55:44 (56582): Disabling Drag and Drop Support for VM.
2024-06-21 22:55:44 (56582): Adding storage controller(s) to VM.
2024-06-21 22:55:44 (56582): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 22:55:45 (56582): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 22:55:45 (56582): forwarding host port 33147 to guest port 80
2024-06-21 22:55:45 (56582): Enabling remote desktop for VM.
2024-06-21 22:55:45 (56582): Required extension pack not installed, remote desktop not enabled.
2024-06-21 22:55:45 (56582): Enabling shared directory for VM.
2024-06-21 22:55:45 (56582): Starting VM using VBoxManage interface. (boinc_e2d750f9624eefff, slot#0)
2024-06-21 22:55:47 (56582): Successfully started VM. (PID = '56838')
2024-06-21 22:55:47 (56582): Reporting VM Process ID to BOINC.
2024-06-21 22:55:47 (56582): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-21 22:55:47 (56582): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 22:55:47 (56582): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 22:55:47 (56582): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 22:55:47 (56582): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 22:55:47 (56582): Detected: Web Application Enabled (http://localhost:33147)
2024-06-21 22:55:47 (56582): Preference change detected
2024-06-21 22:55:47 (56582): Setting CPU throttle for VM. (50%)
2024-06-21 22:55:47 (56582): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 22:55:48 (56582): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 22:55:48 (56582): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 22:55:51 (56582): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 22:55:51 (56582): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 22:55:51 (56582): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 22:56:01 (56582): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 22:56:01 (56582): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 22:56:06 (56582): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000091 main     Log opened 2024-06-21T20:56:05.211571000Z
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000156 main     OS Product: Linux
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000175 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000186 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000197 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000197 main     Process ID: 1359
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000198 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 22:56:06 (56582): Guest Log: 00:00:00.000714 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 22:56:06 (56582): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 22:56:06 (56582): Guest Log: [INFO] Mounting shared directory
2024-06-21 22:56:06 (56582): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 22:56:07 (56582): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 22:56:07 (56582): Guest Log: [INFO] Detected branch: prod
2024-06-21 22:56:07 (56582): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 22:56:07 (56582): Guest Log: Copying input files
2024-06-21 22:56:09 (56582): Guest Log: Copied input files into RunAtlas.
2024-06-21 22:56:09 (56582): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 22:56:09 (56582): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 22:56:09 (56582): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 22:56:09 (56582): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 22:57:24 (56582): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 22:57:24 (56582): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 22:57:24 (56582): Guest Log: 2.6.3.0 1636 1 32248 134142 4 1 3117206 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-21 22:57:24 (56582): Guest Log: copied the webapp to /var/www
2024-06-21 22:57:24 (56582): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-21 22:57:24 (56582): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-21 22:57:24 (56582): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 22:57:24 (56582): Guest Log:  *** Starting ATLAS job. (PandaID=6239375335 taskID=38921013) ***
2024-06-22 00:34:47 (56582): Status Report: Elapsed Time: '6000.000000'
2024-06-22 00:34:47 (56582): Status Report: CPU Time: '18507.250000'
2024-06-22 02:13:47 (56582): Status Report: Elapsed Time: '12000.000000'
2024-06-22 02:13:47 (56582): Status Report: CPU Time: '41164.550000'
2024-06-22 03:52:48 (56582): Status Report: Elapsed Time: '18000.000000'
2024-06-22 03:52:48 (56582): Status Report: CPU Time: '63786.690000'
2024-06-22 04:32:17 (56582): Guest Log:  *** Job finished ***
2024-06-22 04:32:17 (56582): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:31:58,129 | INFO     | [job] queue monitor thread has finished
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:31:58,777 | INFO     | [data] copytool_out thread has finished
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:01,060 | INFO     | [data] queue_monitor thread has finished
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:01,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645999466304)>', '<ExcThread(monitor, started 139645274806016)>']
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:02,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:02,136 | INFO     | [monitor] control thread has ended
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,402 | INFO     | all workflow threads have been joined
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,403 | INFO     | end of generic workflow (traces error code: 0)
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,403 | INFO     | traces error code: 0
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,448 [wrapper] ==== pilot stdout END ====
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,451 [wrapper] ==== wrapper stdout RESUME ====
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,453 [wrapper] pilotpid: 6563
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,456 [wrapper] Pilot exit status: 0
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,673 [wrapper] pandaids: 6239375335
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,696 [wrapper] cleanup supervisor_pilot 22901 6564
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,698 [wrapper] Test setup, not cleaning
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,702 [wrapper] ==== wrapper stdout END ====
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,704 [wrapper] ==== wrapper stderr END ====
2024-06-22 04:32:17 (56582): Guest Log: 2024-06-22 02:32:06,710 [wrapper] apfmon messages muted
2024-06-22 04:32:17 (56582): Guest Log:  *** Error codes and diagnostics ***
2024-06-22 04:32:17 (56582): Guest Log:     "exeErrorCode": 0,
2024-06-22 04:32:17 (56582): Guest Log:     "exeErrorDiag": "",
2024-06-22 04:32:17 (56582): Guest Log:     "pilotErrorCode": 0,
2024-06-22 04:32:17 (56582): Guest Log:     "pilotErrorDiag": "",
2024-06-22 04:32:17 (56582): Guest Log:  *** Listing of results directory ***
2024-06-22 04:32:17 (56582): Guest Log: total 339968
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 21 05:31 pilot3.tar.gz
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 21 06:00 queuedata.json
2024-06-22 04:32:17 (56582): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 21 06:00 runpilot2-wrapper.sh
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas      6886 Jun 21 20:56 init_data.xml
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas    482527 Jun 21 20:56 input.tar.gz
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 21 20:56 start_atlas.sh
2024-06-22 04:32:17 (56582): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 20:56 EVNT.38776210._000989.pool.root.1 -> /data/./ATLAS.root_0
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas      2643 Jun 21 20:57 pandaJob.out
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas       424 Jun 21 20:57 setup.sh.local
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas   1025632 Jun 21 20:57 agis_schedconf.cvmfs.json
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 21 20:57 cric_ddmendpoints.json
2024-06-22 04:32:17 (56582): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 20:57 pilot3
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas 341521121 Jun 22 02:30 HITS.38921013._051003.pool.root.1
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas        95 Jun 22 02:31 pilot_heartbeat.json
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas      1032 Jun 22 02:31 memory_monitor_summary.json
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas         0 Jun 22 02:31 agis_ddmendpoints.agis.ALL.json
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas    381319 Jun 22 02:31 log.38921013._051003.job.log.tgz.1
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas      7731 Jun 22 02:31 heartbeat.json
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas      4271 Jun 22 02:32 pilotlog.txt
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas   1186696 Jun 22 02:32 log.38921013._051003.job.log.1
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas       357 Jun 22 02:32 output.list
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 22 02:32 runtime_log
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas   1587200 Jun 22 02:32 result.tar.gz
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas       674 Jun 22 02:32 RUoLDmwUme5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm6sXKDmPEGMQo.diag
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 atlas atlas     11012 Jun 22 02:32 runtime_log.err
2024-06-22 04:32:17 (56582): Guest Log: Looking for outputfile HITS.38921013._051003.pool.root.1
2024-06-22 04:32:17 (56582): Guest Log: HITS file was successfully produced
2024-06-22 04:32:17 (56582): Guest Log: -rw-------. 1 atlas atlas 341521121 Jun 22 02:30 /home/atlas/RunAtlas/HITS.38921013._051003.pool.root.1
2024-06-22 04:32:17 (56582): Guest Log: Successfully finished the ATLAS job!
2024-06-22 04:32:17 (56582): Guest Log: Copying the results back to the shared directory!
2024-06-22 04:32:17 (56582): Guest Log:  *** Contents of shared directory: ***
2024-06-22 04:32:17 (56582): Guest Log: total 531380
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 root root 542025955 Jun 21 20:55 ATLAS.root_0
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 root root      6886 Jun 21 20:55 init_data.xml
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 root root    482527 Jun 21 20:55 input.tar.gz
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 root root   1587200 Jun 22  2024 result.tar.gz
2024-06-22 04:32:17 (56582): Guest Log: -rw-r--r--. 1 root root     17537 Jun 21 20:55 start_atlas.sh
2024-06-22 04:32:17 (56582): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-22 04:32:17 (56582): VM Completion File Detected.
2024-06-22 04:32:17 (56582): Powering off VM.
2024-06-22 04:32:17 (56582): Successfully stopped VM.
2024-06-22 04:32:17 (56582): Deregistering VM. (boinc_e2d750f9624eefff, slot#0)
2024-06-22 04:32:17 (56582): Removing network bandwidth throttle group from VM.
2024-06-22 04:32:17 (56582): Removing VM from VirtualBox.
04:32:22 (56582): called boinc_finish(0)

</stderr_txt>
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