Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
15:11:26 (142877): wrapper (7.7.26015): starting
15:11:26 (142877): wrapper: running run_atlas (--nthreads 12)
[2024-06-21 15:11:26] Arguments: --nthreads 12
[2024-06-21 15:11:26] Threads: 12
[2024-06-21 15:11:26] Checking for CVMFS
[2024-06-21 15:11:26] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 15:11:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 15:11:26] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 15:11:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 15:11:26] 2.10.1.0 2809 223203 131468 134145 2 139 36826980 45568001 31177 130560 0 1351669969 99.754 886129438 17177 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-21 15:11:26] CVMFS is ok
[2024-06-21 15:11:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 15:11:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 15:11:26] Further information can be found at the LHC@home message board.
[2024-06-21 15:11:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 15:11:26] Checking for apptainer binary...
[2024-06-21 15:11:26] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 15:11:26] Running /usr/bin/apptainer --version
[2024-06-21 15:11:26] apptainer version 1.3.2-1.el7
[2024-06-21 15:11:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 15:11:27] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0075.triumf.lcg
[2024-06-21 15:11:27] apptainer works
[2024-06-21 15:11:27] Set ATHENA_PROC_NUMBER=12
[2024-06-21 15:11:27] Set ATHENA_CORE_NUMBER=12
[2024-06-21 15:11:27] Starting ATLAS job with PandaID=6239354059
[2024-06-21 15:11:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 02:05:10]  *** The last 200 lines of the pilot log: ***
[2024-06-22 02:05:10] 2024-06-22 09:04:54,595 | INFO     | intersect: -10721686857.333035
[2024-06-22 02:05:10] 2024-06-22 09:04:54,595 | INFO     | chi2: 6.758024095476699
[2024-06-22 02:05:10] 2024-06-22 09:04:54,596 | INFO     | model: linear, x: [1719007924.0, 1719007985.0, 1719008046.0, 1719008107.0, 1719008168.0, 1719008229.0, 1719008290.0, 1719008351.0, 1719008412.0, 1719008473.0, 1719
[2024-06-22 02:05:10] 2024-06-22 09:04:54,596 | INFO     | sum of square deviations: 80150379521.37209
[2024-06-22 02:05:10] 2024-06-22 09:04:54,601 | INFO     | sum of deviations: 554517477747.6028
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | mean x: 1719027323.968603
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | mean y: 2720220.4301412874
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | -- intersect: -11890307629.950806
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | intersect: -11890307629.950806
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | chi2: 5.983406811400046
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | current chi2=5.983406811400046 (change=11.462185886480075 %)
[2024-06-22 02:05:10] 2024-06-22 09:04:54,602 | INFO     | right removable region: 636
[2024-06-22 02:05:10] 2024-06-22 09:04:54,603 | INFO     | model: linear, x: [1719008229.0, 1719008290.0, 1719008351.0, 1719008412.0, 1719008473.0, 1719008534.0, 1719008595.0, 1719008656.0, 1719008717.0, 1719008779.0, 1719
[2024-06-22 02:05:10] 2024-06-22 09:04:54,603 | INFO     | sum of square deviations: 80149846005.69228
[2024-06-22 02:05:10] 2024-06-22 09:04:54,608 | INFO     | sum of deviations: 313126108447.0329
[2024-06-22 02:05:10] 2024-06-22 09:04:54,608 | INFO     | mean x: 1719027628.9780219
[2024-06-22 02:05:10] 2024-06-22 09:04:54,608 | INFO     | mean y: 2732753.502354788
[2024-06-22 02:05:10] 2024-06-22 09:04:54,608 | INFO     | -- intersect: -6713093397.137904
[2024-06-22 02:05:10] 2024-06-22 09:04:54,608 | INFO     | intersect: -6713093397.137904
[2024-06-22 02:05:10] 2024-06-22 09:04:54,609 | INFO     | chi2: 3.7788268520762953
[2024-06-22 02:05:10] 2024-06-22 09:04:54,609 | INFO     | current chi2=3.7788268520762953 (change=44.083850565055684 %)
[2024-06-22 02:05:10] 2024-06-22 09:04:54,609 | INFO     | model: linear, x: [1719008534.0, 1719008595.0, 1719008656.0, 1719008717.0, 1719008779.0, 1719008839.0, 1719008900.0, 1719008961.0, 1719009023.0, 1719009083.0, 1719
[2024-06-22 02:05:10] 2024-06-22 09:04:54,610 | INFO     | sum of square deviations: 78276905645.97473
[2024-06-22 02:05:10] 2024-06-22 09:04:54,615 | INFO     | sum of deviations: 148726109670.7595
[2024-06-22 02:05:10] 2024-06-22 09:04:54,615 | INFO     | mean x: 1719027781.493671
[2024-06-22 02:05:10] 2024-06-22 09:04:54,615 | INFO     | mean y: 2746140.564873418
[2024-06-22 02:05:10] 2024-06-22 09:04:54,615 | INFO     | -- intersect: -3263406401.460876
[2024-06-22 02:05:10] 2024-06-22 09:04:54,615 | INFO     | intersect: -3263406401.460876
[2024-06-22 02:05:10] 2024-06-22 09:04:54,615 | INFO     | chi2: 1.8475998125911213
[2024-06-22 02:05:10] 2024-06-22 09:04:54,616 | INFO     | current chi2=1.8475998125911213 (change=51.106523666837276 %)
[2024-06-22 02:05:10] 2024-06-22 09:04:54,616 | INFO     | model: linear, x: [1719008839.0, 1719008900.0, 1719008961.0, 1719009023.0, 1719009083.0, 1719009149.0, 1719009205.0, 1719009266.0, 1719009328.0, 1719009388.0, 1719
[2024-06-22 02:05:10] 2024-06-22 09:04:54,616 | INFO     | sum of square deviations: 76433399496.9601
[2024-06-22 02:05:10] 2024-06-22 09:04:54,621 | INFO     | sum of deviations: 42762778663.390724
[2024-06-22 02:05:10] 2024-06-22 09:04:54,621 | INFO     | mean x: 1719027934.0079744
[2024-06-22 02:05:10] 2024-06-22 09:04:54,621 | INFO     | mean y: 2754889.9218500797
[2024-06-22 02:05:10] 2024-06-22 09:04:54,621 | INFO     | -- intersect: -959002817.3366436
[2024-06-22 02:05:10] 2024-06-22 09:04:54,621 | INFO     | intersect: -959002817.3366436
[2024-06-22 02:05:10] 2024-06-22 09:04:54,622 | INFO     | chi2: 0.891896293188516
[2024-06-22 02:05:10] 2024-06-22 09:04:54,622 | INFO     | current chi2=0.891896293188516 (change=51.726759923313814 %)
[2024-06-22 02:05:10] 2024-06-22 09:04:54,622 | INFO     | model: linear, x: [1719009149.0, 1719009205.0, 1719009266.0, 1719009328.0, 1719009388.0, 1719009449.0, 1719009510.0, 1719009571.0, 1719009632.0, 1719009694.0, 1719
[2024-06-22 02:05:10] 2024-06-22 09:04:54,622 | INFO     | sum of square deviations: 74619056807.18478
[2024-06-22 02:05:10] 2024-06-22 09:04:54,627 | INFO     | sum of deviations: 16082573059.294243
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | mean x: 1719028086.5225081
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | mean y: 2757125.6575562702
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | -- intersect: -367743333.2790281
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | intersect: -367743333.2790281
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | chi2: 0.8151598801862884
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | current chi2=0.8151598801862884 (change=8.603737182032244 %)
[2024-06-22 02:05:10] 2024-06-22 09:04:54,628 | INFO     | left removable region: 40
[2024-06-22 02:05:10] 2024-06-22 09:04:54,629 | INFO     | model: linear, x: [1719010364.0, 1719010427.0, 1719010486.0, 1719010547.0, 1719010608.0, 1719010670.0, 1719010730.0, 1719010791.0, 1719010854.0, 1719010914.0, 1719
[2024-06-22 02:05:10] 2024-06-22 09:04:54,629 | INFO     | sum of square deviations: 65646436820.971695
[2024-06-22 02:05:10] 2024-06-22 09:04:54,633 | INFO     | sum of deviations: 56886359904.16616
[2024-06-22 02:05:10] 2024-06-22 09:04:54,633 | INFO     | mean x: 1719028513.5822148
[2024-06-22 02:05:10] 2024-06-22 09:04:54,633 | INFO     | mean y: 2761266.374161074
[2024-06-22 02:05:10] 2024-06-22 09:04:54,633 | INFO     | -- intersect: -1486874415.9988003
[2024-06-22 02:05:10] 2024-06-22 09:04:54,634 | INFO     | intersect: -1486874415.9988003
[2024-06-22 02:05:10] 2024-06-22 09:04:54,634 | INFO     | chi2: 0.01392382397212585
[2024-06-22 02:05:10] 2024-06-22 09:04:54,634 | INFO     | -- intersect: -1486874415.9988003
[2024-06-22 02:05:10] 2024-06-22 09:04:54,634 | INFO     | current memory leak: 0.87 B/s (using 596 data points, chi2=0.01)
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | ..............................
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . Timing measurements:
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . get job = 0 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . initial setup = 2 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . payload setup = 6 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . stage-in = 0 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . payload execution = 39146 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . stage-out = 2 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | . log creation = 0 s
[2024-06-22 02:05:10] 2024-06-22 09:04:54,635 | INFO     | ..............................
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | 
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | job summary report
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | --------------------------------------------------
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | PanDA job id: 6239354059
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | task id: 38921007
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | errors: (none)
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | pilot state: finished 
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | transexitcode: 0
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | exeerrorcode: 0
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | exeerrordiag: 
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | exitcode: 0
[2024-06-22 02:05:10] 2024-06-22 09:04:55,031 | INFO     | exitmsg: OK
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | cpuconsumptiontime: 100929 s
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | nevents: 400
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | neventsw: 0
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | pid: 154490
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | pgrp: 154490
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | corecount: 12
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | event service: False
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | sizes: {0: 2387105, 4: 2387311, 11: 2387339, 39164: 2428501, 39167: 2437455, 39172: 2437511, 39182: 2437809}
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | --------------------------------------------------
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | 
[2024-06-22 02:05:10] 2024-06-22 09:04:55,032 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | job 6239354059 has completed (purged errors)
[2024-06-22 02:05:10] 2024-06-22 09:04:55,050 | INFO     | overall cleanup function is called
[2024-06-22 02:05:10] 2024-06-22 09:04:55,867 | INFO     | 39200s have passed since pilot start
[2024-06-22 02:05:10] 2024-06-22 09:04:56,061 | INFO     | --- collectZombieJob: --- 10, [154490]
[2024-06-22 02:05:10] 2024-06-22 09:04:56,061 | INFO     | zombie collector waiting for pid 154490
[2024-06-22 02:05:10] 2024-06-22 09:04:56,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 02:05:10] 2024-06-22 09:04:57,066 | INFO     | collected zombie processes
[2024-06-22 02:05:10] 2024-06-22 09:04:57,066 | INFO     | will now attempt to kill all subprocesses of pid=154490
[2024-06-22 02:05:10] 2024-06-22 09:04:57,184 | INFO     | process IDs to be killed: [154490] (in reverse order)
[2024-06-22 02:05:10] 2024-06-22 09:04:57,269 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 02:05:10] 2024-06-22 09:04:57,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 02:05:10] 2024-06-22 09:04:57,275 | INFO     | did not find any defunct processes belonging to 154490
[2024-06-22 02:05:10] 2024-06-22 09:04:57,280 | INFO     | did not find any defunct processes belonging to 154490
[2024-06-22 02:05:10] 2024-06-22 09:04:57,280 | INFO     | ready for new job
[2024-06-22 02:05:10] 2024-06-22 09:04:57,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 02:05:10] 2024-06-22 09:04:57,283 | INFO     | *************************************
[2024-06-22 02:05:10] 2024-06-22 09:04:57,283 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 02:05:10] 2024-06-22 09:04:57,283 | INFO     | *************************************
[2024-06-22 02:05:10] 2024-06-22 09:04:57,283 | INFO     | 
[2024-06-22 02:05:10] 2024-06-22 09:04:57,285 | INFO     | architecture information:
[2024-06-22 02:05:10] 2024-06-22 09:04:57,285 | INFO     | executing command: cat /etc/os-release
[2024-06-22 02:05:10] 2024-06-22 09:04:57,299 | INFO     | cat /etc/os-release:
[2024-06-22 02:05:10] NAME="CentOS Linux"
[2024-06-22 02:05:10] VERSION="7 (Core)"
[2024-06-22 02:05:10] ID="centos"
[2024-06-22 02:05:10] ID_LIKE="rhel fedora"
[2024-06-22 02:05:10] VERSION_ID="7"
[2024-06-22 02:05:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 02:05:10] ANSI_COLOR="0;31"
[2024-06-22 02:05:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 02:05:10] HOME_URL="https://www.centos.org/"
[2024-06-22 02:05:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 02:05:10] 
[2024-06-22 02:05:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 02:05:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 02:05:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 02:05:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 02:05:10] 
[2024-06-22 02:05:10] 2024-06-22 09:04:57,299 | INFO     | *************************************
[2024-06-22 02:05:10] 2024-06-22 09:04:57,805 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-22 02:05:10] 2024-06-22 09:04:58,228 | INFO     | sufficient remaining disk space (1857312260096 B)
[2024-06-22 02:05:10] 2024-06-22 09:04:58,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 02:05:10] 2024-06-22 09:04:58,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 02:05:10] 2024-06-22 09:04:58,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 02:05:10] 2024-06-22 09:04:58,410 | INFO     | all data control threads have been joined
[2024-06-22 02:05:10] 2024-06-22 09:04:58,940 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 02:05:10] 2024-06-22 09:04:58,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 02:05:10] 2024-06-22 09:04:58,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 02:05:10] 2024-06-22 09:04:58,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:05:10] 2024-06-22 09:04:58,963 | INFO     | aborting loop
[2024-06-22 02:05:10] 2024-06-22 09:04:58,972 | INFO     | all job control threads have been joined
[2024-06-22 02:05:10] 2024-06-22 09:04:59,233 | INFO     | [job] retrieve thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,367 | INFO     | [payload] failed_post thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,376 | INFO     | [payload] validate_post thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,416 | INFO     | [data] control thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 02:05:10] 2024-06-22 09:04:59,467 | INFO     | all payload control threads have been joined
[2024-06-22 02:05:10] 2024-06-22 09:04:59,623 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 02:05:10] 2024-06-22 09:04:59,971 | INFO     | [job] job monitor thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,983 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,984 | INFO     | [job] control thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,984 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:04:59,993 | INFO     | [data] copytool_in thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:00,042 | INFO     | [job] validate thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:00,283 | INFO     | [data] copytool_out thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:00,472 | INFO     | [payload] control thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:00,496 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:00,707 | INFO     | [job] queue monitor thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:03,448 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 02:05:10] 2024-06-22 09:05:04,033 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660598933312)>', '<ExcThread(monitor, started 140660019545856)>']
[2024-06-22 02:05:10] 2024-06-22 09:05:04,977 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 02:05:10] 2024-06-22 09:05:04,977 | INFO     | [monitor] control thread has ended
[2024-06-22 02:05:10] 2024-06-22 09:05:09,058 | INFO     | all workflow threads have been joined
[2024-06-22 02:05:10] 2024-06-22 09:05:09,058 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 02:05:10] 2024-06-22 09:05:09,058 | INFO     | traces error code: 0
[2024-06-22 02:05:10] 2024-06-22 09:05:09,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 02:05:10] 2024-06-22 09:05:09,223 [wrapper] ==== pilot stdout END ====
[2024-06-22 02:05:10] 2024-06-22 09:05:09,225 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 02:05:10] 2024-06-22 09:05:09,227 [wrapper] pilotpid: 147081
[2024-06-22 02:05:10] 2024-06-22 09:05:09,229 [wrapper] Pilot exit status: 0
[2024-06-22 02:05:10] 2024-06-22 09:05:09,237 [wrapper] pandaids: 6239354059
[2024-06-22 02:05:10] 2024-06-22 09:05:09,288 [wrapper] cleanup supervisor_pilot 123820 147082
[2024-06-22 02:05:10] 2024-06-22 09:05:09,290 [wrapper] Test setup, not cleaning
[2024-06-22 02:05:10] 2024-06-22 09:05:09,292 [wrapper] ==== wrapper stdout END ====
[2024-06-22 02:05:10] 2024-06-22 09:05:09,294 [wrapper] ==== wrapper stderr END ====
[2024-06-22 02:05:10] 2024-06-22 09:05:09,298 [wrapper] apfmon messages muted
[2024-06-22 02:05:10]  *** Error codes and diagnostics ***
[2024-06-22 02:05:10]     "exeErrorCode": 0,
[2024-06-22 02:05:10]     "exeErrorDiag": "",
[2024-06-22 02:05:10]     "pilotErrorCode": 0,
[2024-06-22 02:05:10]     "pilotErrorDiag": "",
[2024-06-22 02:05:10]  *** Listing of results directory ***
[2024-06-22 02:05:10] total 929976
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc    469766 Jun 20 22:31 pilot3.tar.gz
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc      5654 Jun 20 22:36 queuedata.json
[2024-06-22 02:05:10] -rwx------ 1 boinc boinc     32308 Jun 20 22:37 runpilot2-wrapper.sh
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc       100 Jun 21 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 02:05:10] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 15:11 run_atlas
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc       105 Jun 21 15:11 job.xml
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc      6628 Jun 21 15:11 init_data.xml
[2024-06-22 02:05:10] -rw-r--r-- 2 boinc boinc 583768687 Jun 21 15:11 EVNT.38776201._000788.pool.root.1
[2024-06-22 02:05:10] -rw-r--r-- 2 boinc boinc     17537 Jun 21 15:11 start_atlas.sh
[2024-06-22 02:05:10] drwxrwx--x 2 boinc boinc      4096 Jun 21 15:11 shared
[2024-06-22 02:05:10] -rw-r--r-- 2 boinc boinc    482530 Jun 21 15:11 input.tar.gz
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc         0 Jun 21 15:11 boinc_lockfile
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc      2630 Jun 21 15:11 pandaJob.out
[2024-06-22 02:05:10] -rw------- 1 boinc boinc       424 Jun 21 15:11 setup.sh.local
[2024-06-22 02:05:10] -rw------- 1 boinc boinc   1025624 Jun 21 15:11 agis_schedconf.cvmfs.json
[2024-06-22 02:05:10] -rw------- 1 boinc boinc   1321363 Jun 21 15:11 cric_ddmendpoints.json
[2024-06-22 02:05:10] drwx------ 4 boinc boinc      4096 Jun 21 15:11 pilot3
[2024-06-22 02:05:10] -rw------- 1 boinc boinc 355570330 Jun 22 02:03 HITS.38921007._052265.pool.root.1
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc       533 Jun 22 02:03 boinc_task_state.xml
[2024-06-22 02:05:10] -rw------- 1 boinc boinc      1067 Jun 22 02:04 memory_monitor_summary.json
[2024-06-22 02:05:10] -rw------- 1 boinc boinc        95 Jun 22 02:04 pilot_heartbeat.json
[2024-06-22 02:05:10] -rw------- 1 boinc boinc         0 Jun 22 02:04 agis_ddmendpoints.agis.ALL.json
[2024-06-22 02:05:10] -rw------- 1 boinc boinc    708285 Jun 22 02:04 log.38921007._052265.job.log.tgz.1
[2024-06-22 02:05:10] -rw------- 1 boinc boinc      7789 Jun 22 02:04 heartbeat.json
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc      8192 Jun 22 02:04 boinc_mmap_file
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc        29 Jun 22 02:04 wrapper_checkpoint.txt
[2024-06-22 02:05:10] -rw------- 1 boinc boinc      4210 Jun 22 02:05 pilotlog.txt
[2024-06-22 02:05:10] -rw------- 1 boinc boinc   4000167 Jun 22 02:05 log.38921007._052265.job.log.1
[2024-06-22 02:05:10] -rw------- 1 boinc boinc       357 Jun 22 02:05 output.list
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc       620 Jun 22 02:05 runtime_log
[2024-06-22 02:05:10] -rw------- 1 boinc boinc   4730880 Jun 22 02:05 result.tar.gz
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc     11287 Jun 22 02:05 runtime_log.err
[2024-06-22 02:05:10] -rw------- 1 boinc boinc       661 Jun 22 02:05 2N2LDmg8le5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmpNmKDm5IAbHn.diag
[2024-06-22 02:05:10] -rw-r--r-- 1 boinc boinc     21886 Jun 22 02:05 stderr.txt
[2024-06-22 02:05:10] HITS file was successfully produced:
[2024-06-22 02:05:10] -rw------- 1 boinc boinc 355570330 Jun 22 02:03 shared/HITS.pool.root.1
[2024-06-22 02:05:10]  *** Contents of shared directory: ***
[2024-06-22 02:05:10] total 922448
[2024-06-22 02:05:10] -rw-r--r-- 2 boinc boinc 583768687 Jun 21 15:11 ATLAS.root_0
[2024-06-22 02:05:10] -rw-r--r-- 2 boinc boinc     17537 Jun 21 15:11 start_atlas.sh
[2024-06-22 02:05:10] -rw-r--r-- 2 boinc boinc    482530 Jun 21 15:11 input.tar.gz
[2024-06-22 02:05:10] -rw------- 1 boinc boinc 355570330 Jun 22 02:03 HITS.pool.root.1
[2024-06-22 02:05:10] -rw------- 1 boinc boinc   4730880 Jun 22 02:05 result.tar.gz
02:05:12 (142877): run_atlas exited; CPU time 100127.311795
02:05:12 (142877): called boinc_finish(0)

</stderr_txt>
]]>

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