Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
07:18:33 (213496): wrapper (7.7.26015): starting
07:18:33 (213496): wrapper: running run_atlas (--nthreads 12)
[2024-06-21 07:18:33] Arguments: --nthreads 12
[2024-06-21 07:18:33] Threads: 12
[2024-06-21 07:18:33] Checking for CVMFS
[2024-06-21 07:18:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 07:18:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 07:18:34] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 07:18:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 07:18:34] 2.10.1.0 136058 233986 231316 134130 1 56 41414739 45568000 0 130560 0 702252295 99.730 493566701 14362 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-21 07:18:34] CVMFS is ok
[2024-06-21 07:18:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 07:18:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 07:18:34] Further information can be found at the LHC@home message board.
[2024-06-21 07:18:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 07:18:34] Checking for apptainer binary...
[2024-06-21 07:18:34] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 07:18:34] Running /usr/bin/apptainer --version
[2024-06-21 07:18:34] apptainer version 1.3.2-1.el7
[2024-06-21 07:18:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 07:18:35] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0039.triumf.lcg
[2024-06-21 07:18:35] apptainer works
[2024-06-21 07:18:35] Set ATHENA_PROC_NUMBER=12
[2024-06-21 07:18:35] Set ATHENA_CORE_NUMBER=12
[2024-06-21 07:18:35] Starting ATLAS job with PandaID=6239290026
[2024-06-21 07:18:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 08:19:28]  *** The last 200 lines of the pilot log: ***
[2024-06-21 08:19:28]  lfn=log.40024014._001126.job.log.tgz.1
[2024-06-21 08:19:28]  mtime=0
[2024-06-21 08:19:28]  protocol_id=None
[2024-06-21 08:19:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-21 08:19:28]  replicas=None
[2024-06-21 08:19:28]  scope=mc23_13p6TeV
[2024-06-21 08:19:28]  status=None
[2024-06-21 08:19:28]  status_code=0
[2024-06-21 08:19:28]  storage_token=
[2024-06-21 08:19:28]  surl=/home/boinc/slots/0/PanDA_Pilot-6239290026/log.40024014._001126.job.log.tgz.1
[2024-06-21 08:19:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/8b/log.40024014._001126.job.log.tgz.1
[2024-06-21 08:19:28]  workdir=None
[2024-06-21 08:19:28] ]
[2024-06-21 08:19:28] 2024-06-21 15:19:01,163 | INFO     | transferring file log.40024014._001126.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6239290026/log.40024014._001126.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-21 08:19:28] 2024-06-21 15:19:01,163 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6239290026/log.40024014._001126.job.log.tgz.1 /home/boinc/slots/0/log.40024014._001126.job.log.t
[2024-06-21 08:19:28] 2024-06-21 15:19:01,190 | INFO     | adding to output.list: log.40024014._001126.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/8b/log.40024014._001126.job.log.tg
[2024-06-21 08:19:28] 2024-06-21 15:19:01,190 | INFO     | summary of transferred files:
[2024-06-21 08:19:28] 2024-06-21 15:19:01,190 | INFO     |  -- lfn=log.40024014._001126.job.log.tgz.1, status_code=0, status=transferred
[2024-06-21 08:19:28] 2024-06-21 15:19:01,191 | INFO     | stage-out finished correctly
[2024-06-21 08:19:28] 2024-06-21 15:19:01,828 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-21 08:19:28] 2024-06-21 15:19:02,292 | INFO     | monitor loop #287: job 0:6239290026 is in state 'finished'
[2024-06-21 08:19:28] 2024-06-21 15:19:02,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:19:28] 2024-06-21 15:19:03,834 | INFO     | job 6239290026 has state=finished
[2024-06-21 08:19:28] 2024-06-21 15:19:03,834 | INFO     | preparing for final server update for job 6239290026 in state='finished'
[2024-06-21 08:19:28] 2024-06-21 15:19:03,835 | INFO     | this job has now completed (state=finished)
[2024-06-21 08:19:28] 2024-06-21 15:19:03,835 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-21 08:19:28] 2024-06-21 15:19:03,835 | INFO     | job 6239290026 has finished - writing final server update
[2024-06-21 08:19:28] 2024-06-21 15:19:03,835 | INFO     | total number of processed events: 400 (read)
[2024-06-21 08:19:28] 2024-06-21 15:19:03,842 | INFO     | executing command: lscpu
[2024-06-21 08:19:28] 2024-06-21 15:19:03,906 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-21 08:19:28] 2024-06-21 15:19:03,907 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-21 08:19:28] 2024-06-21 15:19:03,962 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-21 08:19:28] 2024-06-21 15:19:04,528 | INFO     | 3618s have passed since pilot start
[2024-06-21 08:19:28] 2024-06-21 15:19:04,798 | INFO     | monitor loop #288: job 0:6239290026 is in state 'finished'
[2024-06-21 08:19:28] 2024-06-21 15:19:04,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:19:28] 2024-06-21 15:19:07,304 | INFO     | monitor loop #289: job 0:6239290026 is in state 'finished'
[2024-06-21 08:19:28] 2024-06-21 15:19:07,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:19:28] 2024-06-21 15:19:09,810 | INFO     | monitor loop #290: job 0:6239290026 is in state 'finished'
[2024-06-21 08:19:28] 2024-06-21 15:19:09,811 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,316 | INFO     | monitor loop #291: job 0:6239290026 is in state 'finished'
[2024-06-21 08:19:28] 2024-06-21 15:19:12,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,746 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-21 08:19:28] 2024-06-21 15:19:12,747 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6239290026/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,748 | INFO     | extracted standard info from prmon json
[2024-06-21 08:19:28] 2024-06-21 15:19:12,748 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 08:19:28] 2024-06-21 15:19:12,749 | WARNING  | GPU info not found in prmon json
[2024-06-21 08:19:28] 2024-06-21 15:19:12,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 08:19:28] 2024-06-21 15:19:12,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 08:19:28] 2024-06-21 15:19:12,751 | INFO     | fitting pss+swap vs Time
[2024-06-21 08:19:28] 2024-06-21 15:19:12,752 | INFO     | model: linear, x: [1718979860.0, 1718979921.0, 1718979982.0, 1718980043.0, 1718980104.0, 1718980165.0, 1718980226.0, 1718980287.0, 1718980348.0, 1718980409.0, 1718
[2024-06-21 08:19:28] 2024-06-21 15:19:12,752 | INFO     | sum of square deviations: 43584073.0
[2024-06-21 08:19:28] 2024-06-21 15:19:12,752 | INFO     | sum of deviations: 19978174294.000004
[2024-06-21 08:19:28] 2024-06-21 15:19:12,752 | INFO     | mean x: 1718981415.5
[2024-06-21 08:19:28] 2024-06-21 15:19:12,752 | INFO     | mean y: 2706203.8076923075
[2024-06-21 08:19:28] 2024-06-21 15:19:12,753 | INFO     | -- intersect: -787948211715.356
[2024-06-21 08:19:28] 2024-06-21 15:19:12,753 | INFO     | intersect: -787948211715.356
[2024-06-21 08:19:28] 2024-06-21 15:19:12,753 | INFO     | chi2: 1.9886360476982854
[2024-06-21 08:19:28] 2024-06-21 15:19:12,753 | INFO     | -- intersect: -787948211715.356
[2024-06-21 08:19:28] 2024-06-21 15:19:12,753 | INFO     | current memory leak: 458.38 B/s (using 52 data points, chi2=1.99)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | ..............................
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | . Timing measurements:
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | . get job = 0 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | . initial setup = 2 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | . payload setup = 7 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | . stage-in = 0 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,754 | INFO     | . payload execution = 3584 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,755 | INFO     | . stage-out = 0 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,755 | INFO     | . log creation = 0 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,755 | INFO     | ..............................
[2024-06-21 08:19:28] 2024-06-21 15:19:12,843 | INFO     | 
[2024-06-21 08:19:28] 2024-06-21 15:19:12,844 | INFO     | job summary report
[2024-06-21 08:19:28] 2024-06-21 15:19:12,844 | INFO     | --------------------------------------------------
[2024-06-21 08:19:28] 2024-06-21 15:19:12,844 | INFO     | PanDA job id: 6239290026
[2024-06-21 08:19:28] 2024-06-21 15:19:12,844 | INFO     | task id: 40024014
[2024-06-21 08:19:28] 2024-06-21 15:19:12,844 | INFO     | errors: (none)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,844 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | pilot state: finished 
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | transexitcode: 0
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | exeerrorcode: 0
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | exeerrordiag: 
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | exitcode: 0
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | exitmsg: OK
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | cpuconsumptiontime: 31868 s
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | nevents: 400
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | neventsw: 0
[2024-06-21 08:19:28] 2024-06-21 15:19:12,845 | INFO     | pid: 224068
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | pgrp: 224068
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | corecount: 12
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | event service: False
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | sizes: {0: 2386647, 1: 2386846, 6: 2387052, 11: 2387080, 3595: 2412674, 3596: 2412673, 3597: 2421811, 3598: 2421867, 3608: 2422037}
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | --------------------------------------------------
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | 
[2024-06-21 08:19:28] 2024-06-21 15:19:12,846 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 08:19:28] 2024-06-21 15:19:12,877 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,878 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,878 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,878 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,880 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,880 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 08:19:28] 2024-06-21 15:19:12,880 | INFO     | job 6239290026 has completed (purged errors)
[2024-06-21 08:19:28] 2024-06-21 15:19:12,880 | INFO     | overall cleanup function is called
[2024-06-21 08:19:28] 2024-06-21 15:19:13,890 | INFO     | --- collectZombieJob: --- 10, [224068]
[2024-06-21 08:19:28] 2024-06-21 15:19:13,890 | INFO     | zombie collector waiting for pid 224068
[2024-06-21 08:19:28] 2024-06-21 15:19:13,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 08:19:28] 2024-06-21 15:19:14,897 | INFO     | collected zombie processes
[2024-06-21 08:19:28] 2024-06-21 15:19:14,897 | INFO     | will now attempt to kill all subprocesses of pid=224068
[2024-06-21 08:19:28] 2024-06-21 15:19:14,991 | INFO     | process IDs to be killed: [224068] (in reverse order)
[2024-06-21 08:19:28] 2024-06-21 15:19:15,058 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 08:19:28] 2024-06-21 15:19:15,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 08:19:28] 2024-06-21 15:19:15,065 | INFO     | did not find any defunct processes belonging to 224068
[2024-06-21 08:19:28] 2024-06-21 15:19:15,070 | INFO     | did not find any defunct processes belonging to 224068
[2024-06-21 08:19:28] 2024-06-21 15:19:15,070 | INFO     | ready for new job
[2024-06-21 08:19:28] 2024-06-21 15:19:15,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 08:19:28] 2024-06-21 15:19:15,072 | INFO     | *************************************
[2024-06-21 08:19:28] 2024-06-21 15:19:15,073 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 08:19:28] 2024-06-21 15:19:15,073 | INFO     | *************************************
[2024-06-21 08:19:28] 2024-06-21 15:19:15,073 | INFO     | 
[2024-06-21 08:19:28] 2024-06-21 15:19:15,077 | INFO     | architecture information:
[2024-06-21 08:19:28] 2024-06-21 15:19:15,078 | INFO     | executing command: cat /etc/os-release
[2024-06-21 08:19:28] 2024-06-21 15:19:15,101 | INFO     | cat /etc/os-release:
[2024-06-21 08:19:28] NAME="CentOS Linux"
[2024-06-21 08:19:28] VERSION="7 (Core)"
[2024-06-21 08:19:28] ID="centos"
[2024-06-21 08:19:28] ID_LIKE="rhel fedora"
[2024-06-21 08:19:28] VERSION_ID="7"
[2024-06-21 08:19:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 08:19:28] ANSI_COLOR="0;31"
[2024-06-21 08:19:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 08:19:28] HOME_URL="https://www.centos.org/"
[2024-06-21 08:19:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 08:19:28] 
[2024-06-21 08:19:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 08:19:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 08:19:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 08:19:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 08:19:28] 
[2024-06-21 08:19:28] 2024-06-21 15:19:15,101 | INFO     | *************************************
[2024-06-21 08:19:28] 2024-06-21 15:19:15,606 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 08:19:28] 2024-06-21 15:19:15,631 | INFO     | sufficient remaining disk space (2240914915328 B)
[2024-06-21 08:19:28] 2024-06-21 15:19:15,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 08:19:28] 2024-06-21 15:19:15,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 08:19:28] 2024-06-21 15:19:15,633 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 08:19:28] 2024-06-21 15:19:15,633 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 08:19:28] 2024-06-21 15:19:15,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 08:19:28] 2024-06-21 15:19:15,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 08:19:28] 2024-06-21 15:19:15,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 08:19:28] 2024-06-21 15:19:15,833 | INFO     | aborting loop
[2024-06-21 08:19:28] 2024-06-21 15:19:15,865 | INFO     | all job control threads have been joined
[2024-06-21 08:19:28] 2024-06-21 15:19:16,027 | INFO     | all data control threads have been joined
[2024-06-21 08:19:28] 2024-06-21 15:19:16,640 | INFO     | [job] retrieve thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:16,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 08:19:28] 2024-06-21 15:19:16,840 | INFO     | [job] job monitor thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:16,873 | INFO     | [job] control thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:16,930 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:16,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 08:19:28] 2024-06-21 15:19:16,964 | INFO     | [data] copytool_in thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:16,983 | INFO     | [payload] validate_post thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:17,035 | INFO     | [data] control thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:17,109 | INFO     | all payload control threads have been joined
[2024-06-21 08:19:28] 2024-06-21 15:19:17,405 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:17,522 | INFO     | [job] validate thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:17,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 08:19:28] 2024-06-21 15:19:17,981 | INFO     | [payload] failed_post thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:18,012 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:18,075 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:18,114 | INFO     | [payload] control thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:18,799 | INFO     | [data] copytool_out thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:18,864 | INFO     | [job] queue monitor thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:20,976 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 08:19:28] 2024-06-21 15:19:22,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057315100480)>', '<ExcThread(monitor, started 140056534710016)>']
[2024-06-21 08:19:28] 2024-06-21 15:19:22,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 08:19:28] 2024-06-21 15:19:22,676 | INFO     | [monitor] control thread has ended
[2024-06-21 08:19:28] 2024-06-21 15:19:27,395 | INFO     | all workflow threads have been joined
[2024-06-21 08:19:28] 2024-06-21 15:19:27,397 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 08:19:28] 2024-06-21 15:19:27,398 | INFO     | traces error code: 0
[2024-06-21 08:19:28] 2024-06-21 15:19:27,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 08:19:28] 2024-06-21 15:19:27,527 [wrapper] ==== pilot stdout END ====
[2024-06-21 08:19:28] 2024-06-21 15:19:27,532 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 08:19:28] 2024-06-21 15:19:27,536 [wrapper] pilotpid: 217668
[2024-06-21 08:19:28] 2024-06-21 15:19:27,540 [wrapper] Pilot exit status: 0
[2024-06-21 08:19:28] 2024-06-21 15:19:27,554 [wrapper] pandaids: 6239290026
[2024-06-21 08:19:28] 2024-06-21 15:19:27,609 [wrapper] cleanup supervisor_pilot 237187 217669
[2024-06-21 08:19:28] 2024-06-21 15:19:27,613 [wrapper] Test setup, not cleaning
[2024-06-21 08:19:28] 2024-06-21 15:19:27,617 [wrapper] ==== wrapper stdout END ====
[2024-06-21 08:19:28] 2024-06-21 15:19:27,621 [wrapper] ==== wrapper stderr END ====
[2024-06-21 08:19:28] 2024-06-21 15:19:27,629 [wrapper] apfmon messages muted
[2024-06-21 08:19:28]  *** Error codes and diagnostics ***
[2024-06-21 08:19:28]     "exeErrorCode": 0,
[2024-06-21 08:19:28]     "exeErrorDiag": "",
[2024-06-21 08:19:28]     "pilotErrorCode": 0,
[2024-06-21 08:19:28]     "pilotErrorDiag": "",
[2024-06-21 08:19:28]  *** Listing of results directory ***
[2024-06-21 08:19:28] total 834828
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc    469766 Jun 20 21:25 pilot3.tar.gz
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc      5654 Jun 20 21:35 queuedata.json
[2024-06-21 08:19:28] -rwx------ 1 boinc boinc     32308 Jun 20 21:36 runpilot2-wrapper.sh
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc       100 Jun 21 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 08:19:28] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 07:18 run_atlas
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc       105 Jun 21 07:18 job.xml
[2024-06-21 08:19:28] -rw-r--r-- 2 boinc boinc 593868132 Jun 21 07:18 EVNT.40024012._000055.pool.root.1
[2024-06-21 08:19:28] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:18 start_atlas.sh
[2024-06-21 08:19:28] drwxrwx--x 2 boinc boinc      4096 Jun 21 07:18 shared
[2024-06-21 08:19:28] -rw-r--r-- 2 boinc boinc    482483 Jun 21 07:18 input.tar.gz
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc      6629 Jun 21 07:18 init_data.xml
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc         0 Jun 21 07:18 boinc_lockfile
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc      2507 Jun 21 07:18 pandaJob.out
[2024-06-21 08:19:28] -rw------- 1 boinc boinc       424 Jun 21 07:18 setup.sh.local
[2024-06-21 08:19:28] -rw------- 1 boinc boinc   1023013 Jun 21 07:18 agis_schedconf.cvmfs.json
[2024-06-21 08:19:28] -rw------- 1 boinc boinc         0 Jun 21 07:18 agis_ddmendpoints.agis.ALL.json
[2024-06-21 08:19:28] -rw------- 1 boinc boinc   1321251 Jun 21 07:18 cric_ddmendpoints.json
[2024-06-21 08:19:28] drwx------ 4 boinc boinc      4096 Jun 21 07:18 pilot3
[2024-06-21 08:19:28] -rw------- 1 boinc boinc 256086497 Jun 21 08:18 HITS.40024014._001126.pool.root.1
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc       530 Jun 21 08:18 boinc_task_state.xml
[2024-06-21 08:19:28] -rw------- 1 boinc boinc      1048 Jun 21 08:18 memory_monitor_summary.json
[2024-06-21 08:19:28] -rw------- 1 boinc boinc    335223 Jun 21 08:19 log.40024014._001126.job.log.tgz.1
[2024-06-21 08:19:28] -rw------- 1 boinc boinc        95 Jun 21 08:19 pilot_heartbeat.json
[2024-06-21 08:19:28] -rw------- 1 boinc boinc      7757 Jun 21 08:19 heartbeat.json
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc      8192 Jun 21 08:19 boinc_mmap_file
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc        27 Jun 21 08:19 wrapper_checkpoint.txt
[2024-06-21 08:19:28] -rw------- 1 boinc boinc      4333 Jun 21 08:19 pilotlog.txt
[2024-06-21 08:19:28] -rw------- 1 boinc boinc    350530 Jun 21 08:19 log.40024014._001126.job.log.1
[2024-06-21 08:19:28] -rw------- 1 boinc boinc       357 Jun 21 08:19 output.list
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc       620 Jun 21 08:19 runtime_log
[2024-06-21 08:19:28] -rw------- 1 boinc boinc    706560 Jun 21 08:19 result.tar.gz
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc     11286 Jun 21 08:19 runtime_log.err
[2024-06-21 08:19:28] -rw------- 1 boinc boinc       652 Jun 21 08:19 DCxMDmVBle5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmupXKDmNQf0Qn.diag
[2024-06-21 08:19:28] -rw-r--r-- 1 boinc boinc     22029 Jun 21 08:19 stderr.txt
[2024-06-21 08:19:28] HITS file was successfully produced:
[2024-06-21 08:19:28] -rw------- 1 boinc boinc 256086497 Jun 21 08:18 shared/HITS.pool.root.1
[2024-06-21 08:19:28]  *** Contents of shared directory: ***
[2024-06-21 08:19:28] total 831232
[2024-06-21 08:19:28] -rw-r--r-- 2 boinc boinc 593868132 Jun 21 07:18 ATLAS.root_0
[2024-06-21 08:19:28] -rw-r--r-- 2 boinc boinc     17537 Jun 21 07:18 start_atlas.sh
[2024-06-21 08:19:28] -rw-r--r-- 2 boinc boinc    482483 Jun 21 07:18 input.tar.gz
[2024-06-21 08:19:28] -rw------- 1 boinc boinc 256086497 Jun 21 08:18 HITS.pool.root.1
[2024-06-21 08:19:28] -rw------- 1 boinc boinc    706560 Jun 21 08:19 result.tar.gz
08:19:29 (213496): run_atlas exited; CPU time 31678.008760
08:19:29 (213496): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN