Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
11:40:37 (14521): wrapper (7.15.26016): starting
11:40:37 (14521): wrapper (7.15.26016): starting
11:40:37 (14521): wrapper: running run_atlas (--nthreads 2)
[2024-06-21 11:40:38] Arguments: --nthreads 2
[2024-06-21 11:40:38] Threads: 2
[2024-06-21 11:40:38] Checking for CVMFS
[2024-06-21 11:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 11:40:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 11:40:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 11:40:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 11:40:39] 2.11.3.0 2626 17271 58828 134120 3 56 3752982 6291456 2727 130560 1 77502180 99.998 2646773 2295 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://198.51.100.87:7028 1
[2024-06-21 11:40:39] CVMFS is ok
[2024-06-21 11:40:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 11:40:39] Checking for apptainer binary...
[2024-06-21 11:40:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 11:40:39] Running /usr/bin/apptainer --version
[2024-06-21 11:40:39] apptainer version 1.3.0-2.1
[2024-06-21 11:40:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 11:40:39] b3
[2024-06-21 11:40:39] apptainer works
[2024-06-21 11:40:39] Set ATHENA_PROC_NUMBER=2
[2024-06-21 11:40:39] Set ATHENA_CORE_NUMBER=2
[2024-06-21 11:40:39] Starting ATLAS job with PandaID=6239289982
[2024-06-21 11:40:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc3/BOINC_ATLAS/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 11:40:39] Starting apptainer container.
[2024-06-21 11:40:39] To get some details on systemd level run
[2024-06-21 11:40:39] systemctl status ATLAS_boinc3_1_sr5MDmT3ke5n7Olcko1bjSoqABFKDmABFKDmOtvXDme9qKDmyFAGBo_0.scope
[2024-06-21 11:40:39] ----,^^^^,<<<~_____---,^^^,<<~____--,^^,<~__;_
[2024-06-21 19:17:13] Container ATLAS_boinc3_1_sr5MDmT3ke5n7Olcko1bjSoqABFKDmABFKDmOtvXDme9qKDmyFAGBo_0 finished with status code 0.
[2024-06-21 19:17:13]  *** The last 200 lines of the pilot log: ***
[2024-06-21 19:17:13] 2024-06-21 17:16:49,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 19:17:13] 2024-06-21 17:16:50,968 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-21 19:17:13] 2024-06-21 17:16:50,969 | INFO     | using path: /home/boinc3/BOINC_ATLAS/slots/1/PanDA_Pilot-6239289982/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 19:17:13] 2024-06-21 17:16:50,969 | INFO     | extracted standard info from prmon json
[2024-06-21 19:17:13] 2024-06-21 17:16:50,969 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 19:17:13] 2024-06-21 17:16:50,969 | WARNING  | GPU info not found in prmon json
[2024-06-21 19:17:13] 2024-06-21 17:16:50,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 19:17:13] 2024-06-21 17:16:50,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 19:17:13] 2024-06-21 17:16:50,975 | INFO     | fitting pss+swap vs Time
[2024-06-21 19:17:13] 2024-06-21 17:16:50,975 | INFO     | model: linear, x: [1718962910.0, 1718962971.0, 1718963032.0, 1718963093.0, 1718963154.0, 1718963215.0, 1718963276.0, 1718963337.0, 1718963398.0, 1718963459.0, 1718
[2024-06-21 19:17:13] 2024-06-21 17:16:50,975 | INFO     | sum of square deviations: 27881125552.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,978 | INFO     | sum of deviations: -8684887566.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,978 | INFO     | mean x: 1718976543.5
[2024-06-21 19:17:13] 2024-06-21 17:16:50,978 | INFO     | mean y: 2290788.589285714
[2024-06-21 19:17:13] 2024-06-21 17:16:50,978 | INFO     | -- intersect: 537746861.9477695
[2024-06-21 19:17:13] 2024-06-21 17:16:50,978 | INFO     | intersect: 537746861.9477695
[2024-06-21 19:17:13] 2024-06-21 17:16:50,978 | INFO     | chi2: 2.8143863434047915
[2024-06-21 19:17:13] 2024-06-21 17:16:50,979 | INFO     | model: linear, x: [1718962910.0, 1718962971.0, 1718963032.0, 1718963093.0, 1718963154.0, 1718963215.0, 1718963276.0, 1718963337.0, 1718963398.0, 1718963459.0, 1718
[2024-06-21 19:17:13] 2024-06-21 17:16:50,979 | INFO     | sum of square deviations: 26957982662.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,981 | INFO     | sum of deviations: 16218649743.999985
[2024-06-21 19:17:13] 2024-06-21 17:16:50,981 | INFO     | mean x: 1718976391.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,981 | INFO     | mean y: 2294865.4650112865
[2024-06-21 19:17:13] 2024-06-21 17:16:50,981 | INFO     | -- intersect: -1031887712.4150876
[2024-06-21 19:17:13] 2024-06-21 17:16:50,981 | INFO     | intersect: -1031887712.4150876
[2024-06-21 19:17:13] 2024-06-21 17:16:50,982 | INFO     | chi2: 2.1757570509318453
[2024-06-21 19:17:13] 2024-06-21 17:16:50,982 | INFO     | current chi2=2.1757570509318453 (change=22.691600034568975 %)
[2024-06-21 19:17:13] 2024-06-21 17:16:50,982 | INFO     | right removable region: 442
[2024-06-21 19:17:13] 2024-06-21 17:16:50,982 | INFO     | model: linear, x: [1718963215.0, 1718963276.0, 1718963337.0, 1718963398.0, 1718963459.0, 1718963520.0, 1718963581.0, 1718963642.0, 1718963703.0, 1718963764.0, 1718
[2024-06-21 19:17:13] 2024-06-21 17:16:50,982 | INFO     | sum of square deviations: 26957982662.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | sum of deviations: -91520343439.00002
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | mean x: 1718976696.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | mean y: 2304440.334085779
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | -- intersect: 5838102302.290494
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | intersect: 5838102302.290494
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | chi2: 1.055422693349477
[2024-06-21 19:17:13] 2024-06-21 17:16:50,985 | INFO     | current chi2=1.055422693349477 (change=62.499011700268326 %)
[2024-06-21 19:17:13] 2024-06-21 17:16:50,986 | INFO     | model: linear, x: [1718963520.0, 1718963581.0, 1718963642.0, 1718963703.0, 1718963764.0, 1718963825.0, 1718963886.0, 1718963947.0, 1718964008.0, 1718964069.0, 1718
[2024-06-21 19:17:13] 2024-06-21 17:16:50,986 | INFO     | sum of square deviations: 26055444809.5
[2024-06-21 19:17:13] 2024-06-21 17:16:50,988 | INFO     | sum of deviations: -79253440042.0
[2024-06-21 19:17:13] 2024-06-21 17:16:50,988 | INFO     | mean x: 1718976848.5
[2024-06-21 19:17:13] 2024-06-21 17:16:50,988 | INFO     | mean y: 2302356.9406392695
[2024-06-21 19:17:13] 2024-06-21 17:16:50,988 | INFO     | -- intersect: 5230953396.761256
[2024-06-21 19:17:13] 2024-06-21 17:16:50,989 | INFO     | intersect: 5230953396.761256
[2024-06-21 19:17:13] 2024-06-21 17:16:50,989 | INFO     | chi2: 1.009270036166623
[2024-06-21 19:17:13] 2024-06-21 17:16:50,989 | INFO     | current chi2=1.009270036166623 (change=4.372907411757898 %)
[2024-06-21 19:17:13] 2024-06-21 17:16:50,989 | INFO     | left removable region: 20
[2024-06-21 19:17:13] 2024-06-21 17:16:50,989 | INFO     | model: linear, x: [1718964130.0, 1718964191.0, 1718964252.0, 1718964313.0, 1718964374.0, 1718964435.0, 1718964496.0, 1718964557.0, 1718964618.0, 1718964679.0, 1718
[2024-06-21 19:17:13] 2024-06-21 17:16:50,989 | INFO     | sum of square deviations: 23303080645.5
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | sum of deviations: -8601206362.999987
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | mean x: 1718976970.5
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | mean y: 2298509.4312796206
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | -- intersect: 636775808.0098342
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | intersect: 636775808.0098342
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | chi2: 0.16105811184381832
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | -- intersect: 636775808.0098342
[2024-06-21 19:17:13] 2024-06-21 17:16:50,992 | INFO     | current memory leak: -0.37 B/s (using 422 data points, chi2=0.16)
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | ..............................
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . Timing measurements:
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . get job = 0 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . initial setup = 2 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . payload setup = 13 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . stage-in = 0 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . payload execution = 27299 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . stage-out = 1 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | . log creation = 0 s
[2024-06-21 19:17:13] 2024-06-21 17:16:50,993 | INFO     | ..............................
[2024-06-21 19:17:13] 2024-06-21 17:16:51,492 | INFO     | 
[2024-06-21 19:17:13] 2024-06-21 17:16:51,492 | INFO     | job summary report
[2024-06-21 19:17:13] 2024-06-21 17:16:51,492 | INFO     | --------------------------------------------------
[2024-06-21 19:17:13] 2024-06-21 17:16:51,492 | INFO     | PanDA job id: 6239289982
[2024-06-21 19:17:13] 2024-06-21 17:16:51,492 | INFO     | task id: 40024014
[2024-06-21 19:17:13] 2024-06-21 17:16:51,492 | INFO     | errors: (none)
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | pilot state: finished 
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | transexitcode: 0
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | exeerrorcode: 0
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | exeerrordiag: 
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | exitcode: 0
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | exitmsg: OK
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | cpuconsumptiontime: 53858 s
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | nevents: 400
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | neventsw: 0
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | pid: 29436
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | pgrp: 29436
[2024-06-21 19:17:13] 2024-06-21 17:16:51,493 | INFO     | corecount: 2
[2024-06-21 19:17:13] 2024-06-21 17:16:51,494 | INFO     | event service: False
[2024-06-21 19:17:13] 2024-06-21 17:16:51,494 | INFO     | sizes: {0: 2386666, 1: 2386865, 11: 2387099, 27315: 2423572, 27316: 2423571, 27317: 2432627, 27319: 2432811, 27325: 2432981}
[2024-06-21 19:17:13] 2024-06-21 17:16:51,494 | INFO     | --------------------------------------------------
[2024-06-21 19:17:13] 2024-06-21 17:16:51,494 | INFO     | 
[2024-06-21 19:17:13] 2024-06-21 17:16:51,494 | INFO     | executing command: ls -lF /home/boinc3/BOINC_ATLAS/slots/1
[2024-06-21 19:17:13] 2024-06-21 17:16:51,522 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,523 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 19:17:13] 2024-06-21 17:16:51,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,524 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 19:17:13] 2024-06-21 17:16:51,524 | INFO     | job 6239289982 has completed (purged errors)
[2024-06-21 19:17:13] 2024-06-21 17:16:51,524 | INFO     | overall cleanup function is called
[2024-06-21 19:17:13] 2024-06-21 17:16:52,530 | INFO     | --- collectZombieJob: --- 10, [29436]
[2024-06-21 19:17:13] 2024-06-21 17:16:52,530 | INFO     | zombie collector waiting for pid 29436
[2024-06-21 19:17:13] 2024-06-21 17:16:52,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 19:17:13] 2024-06-21 17:16:53,535 | INFO     | collected zombie processes
[2024-06-21 19:17:13] 2024-06-21 17:16:53,536 | INFO     | will now attempt to kill all subprocesses of pid=29436
[2024-06-21 19:17:13] 2024-06-21 17:16:53,636 | INFO     | process IDs to be killed: [29436] (in reverse order)
[2024-06-21 19:17:13] 2024-06-21 17:16:53,716 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 19:17:13] 2024-06-21 17:16:53,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 19:17:13] 2024-06-21 17:16:53,723 | INFO     | did not find any defunct processes belonging to 29436
[2024-06-21 19:17:13] 2024-06-21 17:16:53,730 | INFO     | did not find any defunct processes belonging to 29436
[2024-06-21 19:17:13] 2024-06-21 17:16:53,730 | INFO     | ready for new job
[2024-06-21 19:17:13] 2024-06-21 17:16:53,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 19:17:13] 2024-06-21 17:16:53,732 | INFO     | *************************************
[2024-06-21 19:17:13] 2024-06-21 17:16:53,733 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 19:17:13] 2024-06-21 17:16:53,733 | INFO     | *************************************
[2024-06-21 19:17:13] 2024-06-21 17:16:53,733 | INFO     | 
[2024-06-21 19:17:13] 2024-06-21 17:16:53,735 | INFO     | architecture information:
[2024-06-21 19:17:13] 2024-06-21 17:16:53,735 | INFO     | executing command: cat /etc/os-release
[2024-06-21 19:17:13] 2024-06-21 17:16:53,751 | INFO     | cat /etc/os-release:
[2024-06-21 19:17:13] NAME="CentOS Linux"
[2024-06-21 19:17:13] VERSION="7 (Core)"
[2024-06-21 19:17:13] ID="centos"
[2024-06-21 19:17:13] ID_LIKE="rhel fedora"
[2024-06-21 19:17:13] VERSION_ID="7"
[2024-06-21 19:17:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 19:17:13] ANSI_COLOR="0;31"
[2024-06-21 19:17:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 19:17:13] HOME_URL="https://www.centos.org/"
[2024-06-21 19:17:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 19:17:13] 
[2024-06-21 19:17:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 19:17:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 19:17:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 19:17:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 19:17:13] 
[2024-06-21 19:17:13] 2024-06-21 17:16:53,752 | INFO     | *************************************
[2024-06-21 19:17:13] 2024-06-21 17:16:54,255 | INFO     | executing command: df -mP /home/boinc3/BOINC_ATLAS/slots/1
[2024-06-21 19:17:13] 2024-06-21 17:16:54,273 | INFO     | sufficient remaining disk space (101531516928 B)
[2024-06-21 19:17:13] 2024-06-21 17:16:54,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 19:17:13] 2024-06-21 17:16:54,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 19:17:13] 2024-06-21 17:16:54,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 19:17:13] 2024-06-21 17:16:54,274 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 19:17:13] 2024-06-21 17:16:54,275 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 19:17:13] 2024-06-21 17:16:54,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 19:17:13] 2024-06-21 17:16:54,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 19:17:13] 2024-06-21 17:16:54,358 | INFO     | all data control threads have been joined
[2024-06-21 19:17:13] 2024-06-21 17:16:54,376 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 19:17:13] 2024-06-21 17:16:54,376 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 19:17:13] 2024-06-21 17:16:54,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 19:17:13] 2024-06-21 17:16:54,377 | INFO     | will abort loop
[2024-06-21 19:17:13] 2024-06-21 17:16:54,987 | INFO     | all job control threads have been joined
[2024-06-21 19:17:13] 2024-06-21 17:16:55,278 | INFO     | [job] retrieve thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:55,362 | INFO     | [data] control thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:55,382 | INFO     | [job] job monitor thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:55,408 | INFO     | [payload] validate_post thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:55,459 | INFO     | [payload] failed_post thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:55,475 | INFO     | all payload control threads have been joined
[2024-06-21 19:17:13] 2024-06-21 17:16:55,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 19:17:13] 2024-06-21 17:16:55,959 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:55,992 | INFO     | [job] control thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:56,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 19:17:13] 2024-06-21 17:16:56,210 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:56,280 | INFO     | [data] copytool_out thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:56,481 | INFO     | [payload] control thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:56,495 | INFO     | [data] copytool_in thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:56,558 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:56,724 | INFO     | [job] validate thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:57,072 | INFO     | [job] queue monitor thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:16:59,812 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:17:05,165 | INFO     | job.realtimelogging is not enabled
[2024-06-21 19:17:13] 2024-06-21 17:17:06,168 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 19:17:13] 2024-06-21 17:17:07,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668182107968)>', '<ExcThread(monitor, started 140667795801856)>']
[2024-06-21 19:17:13] 2024-06-21 17:17:08,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 19:17:13] 2024-06-21 17:17:08,340 | INFO     | [monitor] control thread has ended
[2024-06-21 19:17:13] 2024-06-21 17:17:12,712 | INFO     | all workflow threads have been joined
[2024-06-21 19:17:13] 2024-06-21 17:17:12,712 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 19:17:13] 2024-06-21 17:17:12,712 | INFO     | traces error code: 0
[2024-06-21 19:17:13] 2024-06-21 17:17:12,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 19:17:13] 2024-06-21 17:17:12,867 [wrapper] ==== pilot stdout END ====
[2024-06-21 19:17:13] 2024-06-21 17:17:12,870 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 19:17:13] 2024-06-21 17:17:12,873 [wrapper] pilotpid: 20451
[2024-06-21 19:17:13] 2024-06-21 17:17:12,877 [wrapper] Pilot exit status: 0
[2024-06-21 19:17:13] 2024-06-21 17:17:12,889 [wrapper] pandaids: 6239289982
[2024-06-21 19:17:13] 2024-06-21 17:17:12,945 [wrapper] cleanup supervisor_pilot 27835 20461
[2024-06-21 19:17:13] 2024-06-21 17:17:12,948 [wrapper] Test setup, not cleaning
[2024-06-21 19:17:13] 2024-06-21 17:17:12,952 [wrapper] ==== wrapper stdout END ====
[2024-06-21 19:17:13] 2024-06-21 17:17:12,956 [wrapper] ==== wrapper stderr END ====
[2024-06-21 19:17:13] 2024-06-21 17:17:12,964 [wrapper] apfmon messages muted
[2024-06-21 19:17:13]  *** Error codes and diagnostics ***
[2024-06-21 19:17:13]     "exeErrorCode": 0,
[2024-06-21 19:17:13]     "exeErrorDiag": "",
[2024-06-21 19:17:13]     "pilotErrorCode": 0,
[2024-06-21 19:17:13]     "pilotErrorDiag": "",
[2024-06-21 19:17:13]  *** Listing of results directory ***
[2024-06-21 19:17:13] total 848336
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc    469766 Jun 21 06:25 pilot3.tar.gz
[2024-06-21 19:17:13] -rwx------ 1 boinc3 boinc     32308 Jun 21 06:27 runpilot2-wrapper.sh
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc      5654 Jun 21 06:27 queuedata.json
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc       100 Jun 21 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 19:17:13] -rwxr-xr-x 1 boinc3 boinc      9754 Jun 21 11:40 run_atlas
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc       105 Jun 21 11:40 job.xml
[2024-06-21 19:17:13] -rw-r--r-- 2 boinc3 boinc     17537 Jun 21 11:40 start_atlas.sh
[2024-06-21 19:17:13] drwxrwx--x 2 boinc3 boinc       100 Jun 21 11:40 shared
[2024-06-21 19:17:13] -rw-r--r-- 2 boinc3 boinc    482469 Jun 21 11:40 input.tar.gz
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc      6686 Jun 21 11:40 init_data.xml
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc      8192 Jun 21 11:40 boinc_mmap_file
[2024-06-21 19:17:13] -rw-r--r-- 2 boinc3 boinc 597028179 Jun 21 11:40 EVNT.40024012._000053.pool.root.1
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc         0 Jun 21 11:40 boinc_lockfile
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc      2510 Jun 21 11:40 pandaJob.out
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc       452 Jun 21 11:40 setup.sh.local
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc   1023162 Jun 21 11:41 agis_schedconf.cvmfs.json
[2024-06-21 19:17:13] drwx------ 4 boinc3 boinc       400 Jun 21 11:41 pilot3
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc 261514044 Jun 21 19:16 HITS.40024014._001082.pool.root.1
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc      1017 Jun 21 19:16 memory_monitor_summary.json
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc        95 Jun 21 19:16 pilot_heartbeat.json
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc         0 Jun 21 19:16 agis_ddmendpoints.agis.ALL.json
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc   1321363 Jun 21 19:16 cric_ddmendpoints.json
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc    430315 Jun 21 19:16 log.40024014._001082.job.log.tgz.1
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc      7641 Jun 21 19:16 heartbeat.json
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc      4603 Jun 21 19:17 pilotlog.txt
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc   2893683 Jun 21 19:17 log.40024014._001082.job.log.1
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc       357 Jun 21 19:17 output.list
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc       620 Jun 21 19:17 runtime_log
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc   3338240 Jun 21 19:17 result.tar.gz
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc       632 Jun 21 19:17 sr5MDmT3ke5n7Olcko1bjSoqABFKDmABFKDmOtvXDme9qKDmyFAGBo.diag
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc     11451 Jun 21 19:17 runtime_log.err
[2024-06-21 19:17:13] -rw-r--r-- 1 boinc3 boinc     21786 Jun 21 19:17 stderr.txt
[2024-06-21 19:17:13] HITS file was successfully produced:
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc 261514044 Jun 21 19:16 shared/HITS.pool.root.1
[2024-06-21 19:17:13]  *** Contents of shared directory: ***
[2024-06-21 19:17:13] total 842176
[2024-06-21 19:17:13] -rw-r--r-- 2 boinc3 boinc     17537 Jun 21 11:40 start_atlas.sh
[2024-06-21 19:17:13] -rw-r--r-- 2 boinc3 boinc    482469 Jun 21 11:40 input.tar.gz
[2024-06-21 19:17:13] -rw-r--r-- 2 boinc3 boinc 597028179 Jun 21 11:40 ATLAS.root_0
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc 261514044 Jun 21 19:16 HITS.pool.root.1
[2024-06-21 19:17:13] -rw------- 1 boinc3 boinc   3338240 Jun 21 19:17 result.tar.gz
19:17:15 (14521): run_atlas exited; CPU time 53707.838309
19:17:15 (14521): called boinc_finish(0)

</stderr_txt>
]]>

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