Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:14:50 (33359): wrapper (7.7.26015): starting
05:14:50 (33359): wrapper: running run_atlas (--nthreads 8)
[2024-06-21 05:14:50] Arguments: --nthreads 8
[2024-06-21 05:14:50] Threads: 8
[2024-06-21 05:14:50] Checking for CVMFS
[2024-06-21 05:14:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 05:14:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 05:14:51] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 05:14:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 05:14:52] 2.11.2.0 2604 15078 109448 134118 0 241 9854696 18432000 23234 130560 0 4623281 99.280 7897510 54210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-21 05:14:52] CVMFS is ok
[2024-06-21 05:14:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:14:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:14:52] Further information can be found at the LHC@home message board.
[2024-06-21 05:14:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:14:52] Checking for apptainer binary...
[2024-06-21 05:14:52] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 05:14:52] Running /usr/bin/apptainer --version
[2024-06-21 05:14:52] apptainer version 1.3.1-1.el7
[2024-06-21 05:14:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:15:03] c-212-5.aglt2.org
[2024-06-21 05:15:03] apptainer works
[2024-06-21 05:15:03] Set ATHENA_PROC_NUMBER=8
[2024-06-21 05:15:03] Set ATHENA_CORE_NUMBER=8
[2024-06-21 05:15:04] Starting ATLAS job with PandaID=6239289596
[2024-06-21 05:15:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 10:30:24]  *** The last 200 lines of the pilot log: ***
[2024-06-21 10:30:24] 2024-06-21 14:29:47,982 | INFO     | monitor loop #1355: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:29:47,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:29:50,487 | INFO     | monitor loop #1356: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:29:50,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:29:52,996 | INFO     | monitor loop #1357: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:29:52,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:29:55,501 | INFO     | monitor loop #1358: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:29:55,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:29:58,007 | INFO     | monitor loop #1359: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:29:58,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:30:00,516 | INFO     | monitor loop #1360: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:30:00,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:30:03,028 | INFO     | monitor loop #1361: job 0:6239289596 is in state 'finished'
[2024-06-21 10:30:24] 2024-06-21 14:30:03,028 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,317 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-21 10:30:24] 2024-06-21 14:30:05,318 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6239289596/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,319 | INFO     | extracted standard info from prmon json
[2024-06-21 10:30:24] 2024-06-21 14:30:05,319 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 10:30:24] 2024-06-21 14:30:05,319 | WARNING  | GPU info not found in prmon json
[2024-06-21 10:30:24] 2024-06-21 14:30:05,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 10:30:24] 2024-06-21 14:30:05,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 10:30:24] 2024-06-21 14:30:05,347 | INFO     | fitting pss+swap vs Time
[2024-06-21 10:30:24] 2024-06-21 14:30:05,363 | INFO     | model: linear, x: [1718961649.0, 1718961710.0, 1718961771.0, 1718961832.0, 1718961893.0, 1718961954.0, 1718962015.0, 1718962076.0, 1718962137.0, 1718962198.0, 1718
[2024-06-21 10:30:24] 2024-06-21 14:30:05,364 | INFO     | sum of square deviations: 8711564097.789434
[2024-06-21 10:30:24] 2024-06-21 14:30:05,365 | INFO     | sum of deviations: 526992887786.7366
[2024-06-21 10:30:24] 2024-06-21 14:30:05,366 | INFO     | mean x: 1718970890.5263157
[2024-06-21 10:30:24] 2024-06-21 14:30:05,366 | INFO     | mean y: 2317178.4703947366
[2024-06-21 10:30:24] 2024-06-21 14:30:05,366 | INFO     | -- intersect: -103984225703.03929
[2024-06-21 10:30:24] 2024-06-21 14:30:05,366 | INFO     | intersect: -103984225703.03929
[2024-06-21 10:30:24] 2024-06-21 14:30:05,366 | INFO     | chi2: 15.028334773877026
[2024-06-21 10:30:24] 2024-06-21 14:30:05,366 | INFO     | model: linear, x: [1718961649.0, 1718961710.0, 1718961771.0, 1718961832.0, 1718961893.0, 1718961954.0, 1718962015.0, 1718962076.0, 1718962137.0, 1718962198.0, 1718
[2024-06-21 10:30:24] 2024-06-21 14:30:05,367 | INFO     | sum of square deviations: 8288749307.785965
[2024-06-21 10:30:24] 2024-06-21 14:30:05,395 | INFO     | sum of deviations: 536775100490.9396
[2024-06-21 10:30:24] 2024-06-21 14:30:05,397 | INFO     | mean x: 1718970738.0267558
[2024-06-21 10:30:24] 2024-06-21 14:30:05,398 | INFO     | mean y: 2320608.2575250836
[2024-06-21 10:30:24] 2024-06-21 14:30:05,399 | INFO     | -- intersect: -111317331655.63293
[2024-06-21 10:30:24] 2024-06-21 14:30:05,399 | INFO     | intersect: -111317331655.63293
[2024-06-21 10:30:24] 2024-06-21 14:30:05,402 | INFO     | chi2: 14.161054854617316
[2024-06-21 10:30:24] 2024-06-21 14:30:05,402 | INFO     | current chi2=14.161054854617316 (change=5.770964862768812 %)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,403 | INFO     | right removable region: 298
[2024-06-21 10:30:24] 2024-06-21 14:30:05,404 | INFO     | model: linear, x: [1718961954.0, 1718962015.0, 1718962076.0, 1718962137.0, 1718962198.0, 1718962259.0, 1718962320.0, 1718962381.0, 1718962442.0, 1718962503.0, 1718
[2024-06-21 10:30:24] 2024-06-21 14:30:05,406 | INFO     | sum of square deviations: 8288744427.785965
[2024-06-21 10:30:24] 2024-06-21 14:30:05,417 | INFO     | sum of deviations: 436849757589.3913
[2024-06-21 10:30:24] 2024-06-21 14:30:05,418 | INFO     | mean x: 1718971043.0267558
[2024-06-21 10:30:24] 2024-06-21 14:30:05,419 | INFO     | mean y: 2349662.8260869565
[2024-06-21 10:30:24] 2024-06-21 14:30:05,420 | INFO     | -- intersect: -90594252752.86758
[2024-06-21 10:30:24] 2024-06-21 14:30:05,420 | INFO     | intersect: -90594252752.86758
[2024-06-21 10:30:24] 2024-06-21 14:30:05,423 | INFO     | chi2: 11.312887410226063
[2024-06-21 10:30:24] 2024-06-21 14:30:05,424 | INFO     | current chi2=11.312887410226063 (change=24.722947815278456 %)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,424 | INFO     | left removable region: 10
[2024-06-21 10:30:24] 2024-06-21 14:30:05,426 | INFO     | model: linear, x: [1718962259.0, 1718962320.0, 1718962381.0, 1718962442.0, 1718962503.0, 1718962564.0, 1718962625.0, 1718962686.0, 1718962747.0, 1718962808.0, 1718
[2024-06-21 10:30:24] 2024-06-21 14:30:05,427 | INFO     | sum of square deviations: 7407173037.777758
[2024-06-21 10:30:24] 2024-06-21 14:30:05,437 | INFO     | sum of deviations: 386081921980.3058
[2024-06-21 10:30:24] 2024-06-21 14:30:05,438 | INFO     | mean x: 1718971012.5277777
[2024-06-21 10:30:24] 2024-06-21 14:30:05,439 | INFO     | mean y: 2376340.0243055555
[2024-06-21 10:30:24] 2024-06-21 14:30:05,440 | INFO     | -- intersect: -89595048880.14632
[2024-06-21 10:30:24] 2024-06-21 14:30:05,441 | INFO     | intersect: -89595048880.14632
[2024-06-21 10:30:24] 2024-06-21 14:30:05,444 | INFO     | chi2: 9.111664689009343
[2024-06-21 10:30:24] 2024-06-21 14:30:05,445 | INFO     | -- intersect: -89595048880.14632
[2024-06-21 10:30:24] 2024-06-21 14:30:05,446 | INFO     | current memory leak: 52.12 B/s (using 288 data points, chi2=9.11)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,452 | INFO     | ..............................
[2024-06-21 10:30:24] 2024-06-21 14:30:05,453 | INFO     | . Timing measurements:
[2024-06-21 10:30:24] 2024-06-21 14:30:05,453 | INFO     | . get job = 0 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,454 | INFO     | . initial setup = 5 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,455 | INFO     | . payload setup = 61 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,455 | INFO     | . stage-in = 0 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,456 | INFO     | . payload execution = 18565 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,456 | INFO     | . stage-out = 3 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,457 | INFO     | . log creation = 0 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,457 | INFO     | ..............................
[2024-06-21 10:30:24] 2024-06-21 14:30:05,722 | INFO     | 
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | job summary report
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | --------------------------------------------------
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | PanDA job id: 6239289596
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | task id: 40024014
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | errors: (none)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | pilot state: finished 
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | transexitcode: 0
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | exeerrorcode: 0
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | exeerrordiag: 
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | exitcode: 0
[2024-06-21 10:30:24] 2024-06-21 14:30:05,723 | INFO     | exitmsg: OK
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | cpuconsumptiontime: 53700 s
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | nevents: 400
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | neventsw: 0
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | pid: 81009
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | pgrp: 81009
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | corecount: 8
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | event service: False
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | sizes: {0: 2386874, 11: 2386874, 22: 2386902, 32: 2386930, 43: 2386958, 46: 2387192, 54: 2387348, 18630: 2419219, 18633: 2428179, 18636: 2428235, 18686: 2428405}
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | --------------------------------------------------
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | 
[2024-06-21 10:30:24] 2024-06-21 14:30:05,724 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-21 10:30:24] 2024-06-21 14:30:05,962 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | job 6239289596 has completed (purged errors)
[2024-06-21 10:30:24] 2024-06-21 14:30:05,970 | INFO     | overall cleanup function is called
[2024-06-21 10:30:24] 2024-06-21 14:30:07,032 | INFO     | --- collectZombieJob: --- 10, [81009]
[2024-06-21 10:30:24] 2024-06-21 14:30:07,032 | INFO     | zombie collector waiting for pid 81009
[2024-06-21 10:30:24] 2024-06-21 14:30:07,033 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 10:30:24] 2024-06-21 14:30:08,038 | INFO     | collected zombie processes
[2024-06-21 10:30:24] 2024-06-21 14:30:08,038 | INFO     | will now attempt to kill all subprocesses of pid=81009
[2024-06-21 10:30:24] 2024-06-21 14:30:08,500 | INFO     | process IDs to be killed: [81009] (in reverse order)
[2024-06-21 10:30:24] 2024-06-21 14:30:08,938 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 10:30:24] 2024-06-21 14:30:08,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 10:30:24] 2024-06-21 14:30:08,950 | INFO     | did not find any defunct processes belonging to 81009
[2024-06-21 10:30:24] 2024-06-21 14:30:08,960 | INFO     | did not find any defunct processes belonging to 81009
[2024-06-21 10:30:24] 2024-06-21 14:30:08,960 | INFO     | ready for new job
[2024-06-21 10:30:24] 2024-06-21 14:30:08,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 10:30:24] 2024-06-21 14:30:08,962 | INFO     | *************************************
[2024-06-21 10:30:24] 2024-06-21 14:30:08,962 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 10:30:24] 2024-06-21 14:30:08,962 | INFO     | *************************************
[2024-06-21 10:30:24] 2024-06-21 14:30:08,962 | INFO     | 
[2024-06-21 10:30:24] 2024-06-21 14:30:08,966 | INFO     | architecture information:
[2024-06-21 10:30:24] 2024-06-21 14:30:08,966 | INFO     | executing command: cat /etc/os-release
[2024-06-21 10:30:24] 2024-06-21 14:30:08,984 | INFO     | cat /etc/os-release:
[2024-06-21 10:30:24] NAME="CentOS Linux"
[2024-06-21 10:30:24] VERSION="7 (Core)"
[2024-06-21 10:30:24] ID="centos"
[2024-06-21 10:30:24] ID_LIKE="rhel fedora"
[2024-06-21 10:30:24] VERSION_ID="7"
[2024-06-21 10:30:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 10:30:24] ANSI_COLOR="0;31"
[2024-06-21 10:30:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 10:30:24] HOME_URL="https://www.centos.org/"
[2024-06-21 10:30:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 10:30:24] 
[2024-06-21 10:30:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 10:30:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 10:30:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 10:30:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 10:30:24] 
[2024-06-21 10:30:24] 2024-06-21 14:30:08,985 | INFO     | *************************************
[2024-06-21 10:30:24] 2024-06-21 14:30:09,488 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-21 10:30:24] 2024-06-21 14:30:09,537 | INFO     | sufficient remaining disk space (99018080256 B)
[2024-06-21 10:30:24] 2024-06-21 14:30:09,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 10:30:24] 2024-06-21 14:30:09,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 10:30:24] 2024-06-21 14:30:09,538 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 10:30:24] 2024-06-21 14:30:09,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:30:24] 2024-06-21 14:30:09,544 | INFO     | aborting loop
[2024-06-21 10:30:24] 2024-06-21 14:30:09,989 | INFO     | all payload control threads have been joined
[2024-06-21 10:30:24] 2024-06-21 14:30:10,014 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 10:30:24] 2024-06-21 14:30:10,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 10:30:24] 2024-06-21 14:30:10,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 10:30:24] 2024-06-21 14:30:10,067 | INFO     | all job control threads have been joined
[2024-06-21 10:30:24] 2024-06-21 14:30:10,302 | INFO     | all data control threads have been joined
[2024-06-21 10:30:24] 2024-06-21 14:30:10,543 | INFO     | [job] retrieve thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:10,550 | INFO     | [job] job monitor thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:10,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:30:24] 2024-06-21 14:30:10,743 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:10,994 | INFO     | [payload] control thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:10,999 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,066 | INFO     | [payload] failed_post thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,073 | INFO     | [job] control thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,186 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,188 | INFO     | [data] copytool_in thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,308 | INFO     | [data] control thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,512 | INFO     | [job] validate thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 10:30:24] 2024-06-21 14:30:11,550 | INFO     | [data] copytool_out thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,563 | INFO     | [payload] validate_post thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,743 | INFO     | [job] queue monitor thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:11,934 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:15,544 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 10:30:24] 2024-06-21 14:30:17,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094097954624)>', '<ExcThread(monitor, started 140093796882176)>']
[2024-06-21 10:30:24] 2024-06-21 14:30:17,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 10:30:24] 2024-06-21 14:30:17,056 | INFO     | [monitor] control thread has ended
[2024-06-21 10:30:24] 2024-06-21 14:30:22,061 | INFO     | all workflow threads have been joined
[2024-06-21 10:30:24] 2024-06-21 14:30:22,061 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 10:30:24] 2024-06-21 14:30:22,062 | INFO     | traces error code: 0
[2024-06-21 10:30:24] 2024-06-21 14:30:22,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 10:30:24] 2024-06-21 14:30:22,313 [wrapper] ==== pilot stdout END ====
[2024-06-21 10:30:24] 2024-06-21 14:30:22,330 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 10:30:24] 2024-06-21 14:30:22,369 [wrapper] pilotpid: 51779
[2024-06-21 10:30:24] 2024-06-21 14:30:22,411 [wrapper] Pilot exit status: 0
[2024-06-21 10:30:24] 2024-06-21 14:30:22,564 [wrapper] pandaids: 6239289596
[2024-06-21 10:30:24] 2024-06-21 14:30:22,998 [wrapper] cleanup supervisor_pilot 82642 51780
[2024-06-21 10:30:24] 2024-06-21 14:30:23,039 [wrapper] Test setup, not cleaning
[2024-06-21 10:30:24] 2024-06-21 14:30:23,075 [wrapper] ==== wrapper stdout END ====
[2024-06-21 10:30:24] 2024-06-21 14:30:23,119 [wrapper] ==== wrapper stderr END ====
[2024-06-21 10:30:24] 2024-06-21 14:30:23,179 [wrapper] apfmon messages muted
[2024-06-21 10:30:24]  *** Error codes and diagnostics ***
[2024-06-21 10:30:24]     "exeErrorCode": 0,
[2024-06-21 10:30:24]     "exeErrorDiag": "",
[2024-06-21 10:30:24]     "pilotErrorCode": 0,
[2024-06-21 10:30:24]     "pilotErrorDiag": "",
[2024-06-21 10:30:24]  *** Listing of results directory ***
[2024-06-21 10:30:24] total 843056
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas    469766 Jun 20 23:55 pilot3.tar.gz
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas      5654 Jun 21 00:07 queuedata.json
[2024-06-21 10:30:24] -rwx------ 1 boincer umatlas     32308 Jun 21 00:07 runpilot2-wrapper.sh
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas       100 Jun 21 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 10:30:24] -rwxr-xr-x 1 boincer umatlas      7986 Jun 21 05:14 run_atlas
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas       105 Jun 21 05:14 job.xml
[2024-06-21 10:30:24] -rw-r--r-- 2 boincer umatlas 596054177 Jun 21 05:14 EVNT.40024012._000048.pool.root.1
[2024-06-21 10:30:24] -rw-r--r-- 2 boincer umatlas     17537 Jun 21 05:14 start_atlas.sh
[2024-06-21 10:30:24] drwxrwx--x 2 boincer umatlas      4096 Jun 21 05:14 shared
[2024-06-21 10:30:24] -rw-r--r-- 2 boincer umatlas    482478 Jun 21 05:14 input.tar.gz
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas         0 Jun 21 05:14 boinc_lockfile
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas      2509 Jun 21 05:15 pandaJob.out
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas       467 Jun 21 05:15 setup.sh.local
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas   1023162 Jun 21 05:16 agis_schedconf.cvmfs.json
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas   1321251 Jun 21 05:16 cric_ddmendpoints.json
[2024-06-21 10:30:24] drwx------ 4 boincer umatlas      4096 Jun 21 05:16 pilot3
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas 259393114 Jun 21 10:27 HITS.40024014._000970.pool.root.1
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas       532 Jun 21 10:27 boinc_task_state.xml
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas      6387 Jun 21 10:28 init_data.xml
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas      1093 Jun 21 10:29 memory_monitor_summary.json
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas         0 Jun 21 10:29 agis_ddmendpoints.agis.ALL.json
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas    455250 Jun 21 10:29 log.40024014._000970.job.log.tgz.1
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas        95 Jun 21 10:29 pilot_heartbeat.json
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas      7757 Jun 21 10:30 heartbeat.json
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas      8192 Jun 21 10:30 boinc_mmap_file
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas        28 Jun 21 10:30 wrapper_checkpoint.txt
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas      4211 Jun 21 10:30 pilotlog.txt
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas   1697452 Jun 21 10:30 log.40024014._000970.job.log.1
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas       357 Jun 21 10:30 output.list
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas       620 Jun 21 10:30 runtime_log
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas   2170880 Jun 21 10:30 result.tar.gz
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas     11400 Jun 21 10:30 runtime_log.err
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas       652 Jun 21 10:30 PehKDmUjke5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmFImKDmclH3xm.diag
[2024-06-21 10:30:24] -rw-r--r-- 1 boincer umatlas     21907 Jun 21 10:30 stderr.txt
[2024-06-21 10:30:24] HITS file was successfully produced:
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas 259393114 Jun 21 10:27 shared/HITS.pool.root.1
[2024-06-21 10:30:24]  *** Contents of shared directory: ***
[2024-06-21 10:30:24] total 838024
[2024-06-21 10:30:24] -rw-r--r-- 2 boincer umatlas 596054177 Jun 21 05:14 ATLAS.root_0
[2024-06-21 10:30:24] -rw-r--r-- 2 boincer umatlas     17537 Jun 21 05:14 start_atlas.sh
[2024-06-21 10:30:24] -rw-r--r-- 2 boincer umatlas    482478 Jun 21 05:14 input.tar.gz
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas 259393114 Jun 21 10:27 HITS.pool.root.1
[2024-06-21 10:30:24] -rw------- 1 boincer umatlas   2170880 Jun 21 10:30 result.tar.gz
10:30:25 (33359): run_atlas exited; CPU time 52165.564617
10:30:25 (33359): called boinc_finish(0)

</stderr_txt>
]]>

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