Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:20:03 (2137347): wrapper (7.7.26015): starting
10:20:03 (2137347): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 10:20:03] Arguments: --nthreads 4
[2024-06-23 10:20:03] Threads: 4
[2024-06-23 10:20:03] Checking for CVMFS
[2024-06-23 10:20:03] No cvmfs_config command found, will try listing directly
[2024-06-23 10:20:03] CVMFS is ok
[2024-06-23 10:20:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-23 10:20:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-23 10:20:03] Further information can be found at the LHC@home message board.
[2024-06-23 10:20:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 10:20:03] Checking for apptainer binary...
[2024-06-23 10:20:03] which: no apptainer in ((null))
[2024-06-23 10:20:03] apptainer is not installed, using version from CVMFS
[2024-06-23 10:20:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 10:20:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-06-23 10:20:04] apptainer works
[2024-06-23 10:20:04] Set ATHENA_PROC_NUMBER=4
[2024-06-23 10:20:04] Set ATHENA_CORE_NUMBER=4
[2024-06-23 10:20:04] Starting ATLAS job with PandaID=6239289341
[2024-06-23 10:20:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 16:29:53]  *** The last 200 lines of the pilot log: ***
[2024-06-23 16:29:53] 2024-06-23 14:29:39,534 | WARNING  | GPU info not found in prmon json
[2024-06-23 16:29:53] 2024-06-23 14:29:39,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 16:29:53] 2024-06-23 14:29:39,534 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 16:29:53] 2024-06-23 14:29:39,542 | INFO     | fitting pss+swap vs Time
[2024-06-23 16:29:53] 2024-06-23 14:29:39,542 | INFO     | model: linear, x: [1719130857.0, 1719130918.0, 1719130979.0, 1719131040.0, 1719131101.0, 1719131162.0, 1719131223.0, 1719131284.0, 1719131345.0, 1719131406.0, 1719
[2024-06-23 16:29:53] 2024-06-23 14:29:39,543 | INFO     | sum of square deviations: 14831839022.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,546 | INFO     | sum of deviations: 56018677352.99997
[2024-06-23 16:29:53] 2024-06-23 14:29:39,547 | INFO     | mean x: 1719141898.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,547 | INFO     | mean y: 2359194.1046831957
[2024-06-23 16:29:53] 2024-06-23 14:29:39,547 | INFO     | -- intersect: -6490703140.595593
[2024-06-23 16:29:53] 2024-06-23 14:29:39,547 | INFO     | intersect: -6490703140.595593
[2024-06-23 16:29:53] 2024-06-23 14:29:39,548 | INFO     | chi2: 4.582239606849303
[2024-06-23 16:29:53] 2024-06-23 14:29:39,548 | INFO     | model: linear, x: [1719130857.0, 1719130918.0, 1719130979.0, 1719131040.0, 1719131101.0, 1719131162.0, 1719131223.0, 1719131284.0, 1719131345.0, 1719131406.0, 1719
[2024-06-23 16:29:53] 2024-06-23 14:29:39,549 | INFO     | sum of square deviations: 14227353269.5
[2024-06-23 16:29:53] 2024-06-23 14:29:39,552 | INFO     | sum of deviations: 78192389999.00002
[2024-06-23 16:29:53] 2024-06-23 14:29:39,553 | INFO     | mean x: 1719141745.5
[2024-06-23 16:29:53] 2024-06-23 14:29:39,553 | INFO     | mean y: 2364723.5363128493
[2024-06-23 16:29:53] 2024-06-23 14:29:39,553 | INFO     | -- intersect: -9445900128.076653
[2024-06-23 16:29:53] 2024-06-23 14:29:39,553 | INFO     | intersect: -9445900128.076653
[2024-06-23 16:29:53] 2024-06-23 14:29:39,554 | INFO     | chi2: 3.8260254625082672
[2024-06-23 16:29:53] 2024-06-23 14:29:39,554 | INFO     | current chi2=3.8260254625082672 (change=16.503155863143526 %)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,554 | INFO     | right removable region: 357
[2024-06-23 16:29:53] 2024-06-23 14:29:39,554 | INFO     | model: linear, x: [1719131162.0, 1719131223.0, 1719131284.0, 1719131345.0, 1719131406.0, 1719131467.0, 1719131528.0, 1719131589.0, 1719131650.0, 1719131711.0, 1719
[2024-06-23 16:29:53] 2024-06-23 14:29:39,555 | INFO     | sum of square deviations: 14227353269.5
[2024-06-23 16:29:53] 2024-06-23 14:29:39,559 | INFO     | sum of deviations: -26000252680.500008
[2024-06-23 16:29:53] 2024-06-23 14:29:39,559 | INFO     | mean x: 1719142050.5
[2024-06-23 16:29:53] 2024-06-23 14:29:39,559 | INFO     | mean y: 2379843.75698324
[2024-06-23 16:29:53] 2024-06-23 14:29:39,559 | INFO     | -- intersect: 3144083494.4630404
[2024-06-23 16:29:53] 2024-06-23 14:29:39,560 | INFO     | intersect: 3144083494.4630404
[2024-06-23 16:29:53] 2024-06-23 14:29:39,560 | INFO     | chi2: 2.281865787301143
[2024-06-23 16:29:53] 2024-06-23 14:29:39,560 | INFO     | current chi2=2.281865787301143 (change=50.20195399886283 %)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,561 | INFO     | model: linear, x: [1719131467.0, 1719131528.0, 1719131589.0, 1719131650.0, 1719131711.0, 1719131772.0, 1719131833.0, 1719131894.0, 1719131955.0, 1719132016.0, 1719
[2024-06-23 16:29:53] 2024-06-23 14:29:39,561 | INFO     | sum of square deviations: 13639518992.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,565 | INFO     | sum of deviations: -87217793473.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,566 | INFO     | mean x: 1719142203.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,566 | INFO     | mean y: 2395725.158640227
[2024-06-23 16:29:53] 2024-06-23 14:29:39,566 | INFO     | -- intersect: 10995436586.78408
[2024-06-23 16:29:53] 2024-06-23 14:29:39,566 | INFO     | intersect: 10995436586.78408
[2024-06-23 16:29:53] 2024-06-23 14:29:39,567 | INFO     | chi2: 1.0948520030627358
[2024-06-23 16:29:53] 2024-06-23 14:29:39,567 | INFO     | current chi2=1.0948520030627358 (change=52.01943912934238 %)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,567 | INFO     | model: linear, x: [1719131772.0, 1719131833.0, 1719131894.0, 1719131955.0, 1719132016.0, 1719132077.0, 1719132138.0, 1719132199.0, 1719132260.0, 1719132321.0, 1719
[2024-06-23 16:29:53] 2024-06-23 14:29:39,568 | INFO     | sum of square deviations: 13068103627.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,572 | INFO     | sum of deviations: -93020344785.00002
[2024-06-23 16:29:53] 2024-06-23 14:29:39,572 | INFO     | mean x: 1719142355.5
[2024-06-23 16:29:53] 2024-06-23 14:29:39,572 | INFO     | mean y: 2397251.327586207
[2024-06-23 16:29:53] 2024-06-23 14:29:39,572 | INFO     | -- intersect: 12239460807.565874
[2024-06-23 16:29:53] 2024-06-23 14:29:39,572 | INFO     | intersect: 12239460807.565874
[2024-06-23 16:29:53] 2024-06-23 14:29:39,573 | INFO     | chi2: 1.036417317928238
[2024-06-23 16:29:53] 2024-06-23 14:29:39,573 | INFO     | current chi2=1.036417317928238 (change=5.337222288586281 %)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,573 | INFO     | left removable region: 30
[2024-06-23 16:29:53] 2024-06-23 14:29:39,574 | INFO     | model: linear, x: [1719132687.0, 1719132748.0, 1719132809.0, 1719132870.0, 1719132931.0, 1719132992.0, 1719133053.0, 1719133114.0, 1719133175.0, 1719133236.0, 1719
[2024-06-23 16:29:53] 2024-06-23 14:29:39,574 | INFO     | sum of square deviations: 10842205148.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,577 | INFO     | sum of deviations: -42910077229.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,577 | INFO     | mean x: 1719142630.0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,578 | INFO     | mean y: 2395806.4954128442
[2024-06-23 16:29:53] 2024-06-23 14:29:39,578 | INFO     | -- intersect: 6806227869.622704
[2024-06-23 16:29:53] 2024-06-23 14:29:39,578 | INFO     | intersect: 6806227869.622704
[2024-06-23 16:29:53] 2024-06-23 14:29:39,578 | INFO     | chi2: 0.21198008052166373
[2024-06-23 16:29:53] 2024-06-23 14:29:39,579 | INFO     | -- intersect: 6806227869.622704
[2024-06-23 16:29:53] 2024-06-23 14:29:39,579 | INFO     | current memory leak: -3.96 B/s (using 327 data points, chi2=0.21)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,580 | INFO     | ..............................
[2024-06-23 16:29:53] 2024-06-23 14:29:39,580 | INFO     | . Timing measurements:
[2024-06-23 16:29:53] 2024-06-23 14:29:39,580 | INFO     | . get job = 0 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,580 | INFO     | . initial setup = 1 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,580 | INFO     | . payload setup = 8 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,580 | INFO     | . stage-in = 0 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,581 | INFO     | . payload execution = 22108 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,581 | INFO     | . stage-out = 1 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,581 | INFO     | . log creation = 0 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,581 | INFO     | ..............................
[2024-06-23 16:29:53] 2024-06-23 14:29:39,698 | INFO     | 
[2024-06-23 16:29:53] 2024-06-23 14:29:39,698 | INFO     | job summary report
[2024-06-23 16:29:53] 2024-06-23 14:29:39,698 | INFO     | --------------------------------------------------
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | PanDA job id: 6239289341
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | task id: 40024014
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | errors: (none)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | pilot state: finished 
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | transexitcode: 0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,699 | INFO     | exeerrorcode: 0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | exeerrordiag: 
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | exitcode: 0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | exitmsg: OK
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | cpuconsumptiontime: 82517 s
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | nevents: 400
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | neventsw: 0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | pid: 2148734
[2024-06-23 16:29:53] 2024-06-23 14:29:39,700 | INFO     | pgrp: 2148734
[2024-06-23 16:29:53] 2024-06-23 14:29:39,701 | INFO     | corecount: 4
[2024-06-23 16:29:53] 2024-06-23 14:29:39,701 | INFO     | event service: False
[2024-06-23 16:29:53] 2024-06-23 14:29:39,701 | INFO     | sizes: {0: 2386854, 8: 2387060, 11: 2387088, 22120: 2421014, 22122: 2430052, 22139: 2430166}
[2024-06-23 16:29:53] 2024-06-23 14:29:39,701 | INFO     | --------------------------------------------------
[2024-06-23 16:29:53] 2024-06-23 14:29:39,701 | INFO     | 
[2024-06-23 16:29:53] 2024-06-23 14:29:39,701 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-06-23 16:29:53] 2024-06-23 14:29:39,750 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,751 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,751 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,751 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,753 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,753 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 16:29:53] 2024-06-23 14:29:39,753 | INFO     | job 6239289341 has completed (purged errors)
[2024-06-23 16:29:53] 2024-06-23 14:29:39,753 | INFO     | overall cleanup function is called
[2024-06-23 16:29:53] 2024-06-23 14:29:40,760 | INFO     | --- collectZombieJob: --- 10, [2148734]
[2024-06-23 16:29:53] 2024-06-23 14:29:40,760 | INFO     | zombie collector waiting for pid 2148734
[2024-06-23 16:29:53] 2024-06-23 14:29:40,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 16:29:53] 2024-06-23 14:29:41,765 | INFO     | collected zombie processes
[2024-06-23 16:29:53] 2024-06-23 14:29:41,765 | INFO     | will now attempt to kill all subprocesses of pid=2148734
[2024-06-23 16:29:53] 2024-06-23 14:29:41,902 | INFO     | process IDs to be killed: [2148734] (in reverse order)
[2024-06-23 16:29:53] 2024-06-23 14:29:42,001 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 16:29:53] 2024-06-23 14:29:42,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 16:29:53] 2024-06-23 14:29:42,009 | INFO     | did not find any defunct processes belonging to 2148734
[2024-06-23 16:29:53] 2024-06-23 14:29:42,016 | INFO     | did not find any defunct processes belonging to 2148734
[2024-06-23 16:29:53] 2024-06-23 14:29:42,016 | INFO     | ready for new job
[2024-06-23 16:29:53] 2024-06-23 14:29:42,016 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 16:29:53] 2024-06-23 14:29:42,019 | INFO     | *************************************
[2024-06-23 16:29:53] 2024-06-23 14:29:42,019 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 16:29:53] 2024-06-23 14:29:42,019 | INFO     | *************************************
[2024-06-23 16:29:53] 2024-06-23 14:29:42,019 | INFO     | 
[2024-06-23 16:29:53] 2024-06-23 14:29:42,021 | INFO     | architecture information:
[2024-06-23 16:29:53] 2024-06-23 14:29:42,022 | INFO     | executing command: cat /etc/os-release
[2024-06-23 16:29:53] 2024-06-23 14:29:42,048 | INFO     | cat /etc/os-release:
[2024-06-23 16:29:53] NAME="CentOS Linux"
[2024-06-23 16:29:53] VERSION="7 (Core)"
[2024-06-23 16:29:53] ID="centos"
[2024-06-23 16:29:53] ID_LIKE="rhel fedora"
[2024-06-23 16:29:53] VERSION_ID="7"
[2024-06-23 16:29:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 16:29:53] ANSI_COLOR="0;31"
[2024-06-23 16:29:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 16:29:53] HOME_URL="https://www.centos.org/"
[2024-06-23 16:29:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 16:29:53] 
[2024-06-23 16:29:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 16:29:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 16:29:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 16:29:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 16:29:53] 
[2024-06-23 16:29:53] 2024-06-23 14:29:42,048 | INFO     | *************************************
[2024-06-23 16:29:53] 2024-06-23 14:29:42,550 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-06-23 16:29:53] 2024-06-23 14:29:42,575 | INFO     | sufficient remaining disk space (1666066677760 B)
[2024-06-23 16:29:53] 2024-06-23 14:29:42,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 16:29:53] 2024-06-23 14:29:42,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 16:29:53] 2024-06-23 14:29:42,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 16:29:53] 2024-06-23 14:29:42,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 16:29:53] 2024-06-23 14:29:42,581 | INFO     | aborting loop
[2024-06-23 16:29:53] 2024-06-23 14:29:42,985 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 16:29:53] 2024-06-23 14:29:42,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 16:29:53] 2024-06-23 14:29:42,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 16:29:53] 2024-06-23 14:29:43,147 | INFO     | all job control threads have been joined
[2024-06-23 16:29:53] 2024-06-23 14:29:43,221 | INFO     | all data control threads have been joined
[2024-06-23 16:29:53] 2024-06-23 14:29:43,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 16:29:53] 2024-06-23 14:29:43,447 | INFO     | all payload control threads have been joined
[2024-06-23 16:29:53] 2024-06-23 14:29:43,581 | INFO     | [job] retrieve thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:43,586 | INFO     | [job] job monitor thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:43,867 | INFO     | [job] validate thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,152 | INFO     | [job] control thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,185 | INFO     | [payload] failed_post thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,226 | INFO     | [data] control thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,279 | INFO     | [data] copytool_in thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,285 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,452 | INFO     | [payload] control thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,457 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,457 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,645 | INFO     | [payload] validate_post thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:44,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 16:29:53] 2024-06-23 14:29:44,987 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:45,365 | INFO     | [data] copytool_out thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:45,713 | INFO     | [job] queue monitor thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:46,582 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 16:29:53] 2024-06-23 14:29:47,467 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47242061055040)>', '<ExcThread(monitor, started 47242241328896)>']
[2024-06-23 16:29:53] 2024-06-23 14:29:48,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 16:29:53] 2024-06-23 14:29:48,010 | INFO     | [monitor] control thread has ended
[2024-06-23 16:29:53] 2024-06-23 14:29:52,492 | INFO     | all workflow threads have been joined
[2024-06-23 16:29:53] 2024-06-23 14:29:52,492 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 16:29:53] 2024-06-23 14:29:52,493 | INFO     | traces error code: 0
[2024-06-23 16:29:53] 2024-06-23 14:29:52,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 16:29:53] 2024-06-23 14:29:52,618 [wrapper] ==== pilot stdout END ====
[2024-06-23 16:29:53] 2024-06-23 14:29:52,629 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 16:29:53] 2024-06-23 14:29:52,635 [wrapper] pilotpid: 2141773
[2024-06-23 16:29:53] 2024-06-23 14:29:52,645 [wrapper] Pilot exit status: 0
[2024-06-23 16:29:53] 2024-06-23 14:29:52,748 [wrapper] pandaids: 6239289341
[2024-06-23 16:29:53] 2024-06-23 14:29:52,809 [wrapper] cleanup supervisor_pilot 2681241 2141774
[2024-06-23 16:29:53] 2024-06-23 14:29:52,815 [wrapper] Test setup, not cleaning
[2024-06-23 16:29:53] 2024-06-23 14:29:52,820 [wrapper] ==== wrapper stdout END ====
[2024-06-23 16:29:53] 2024-06-23 14:29:52,839 [wrapper] ==== wrapper stderr END ====
[2024-06-23 16:29:53] 2024-06-23 14:29:52,876 [wrapper] apfmon messages muted
[2024-06-23 16:29:53]  *** Error codes and diagnostics ***
[2024-06-23 16:29:53]     "exeErrorCode": 0,
[2024-06-23 16:29:53]     "exeErrorDiag": "",
[2024-06-23 16:29:53]     "pilotErrorCode": 0,
[2024-06-23 16:29:53]     "pilotErrorDiag": "",
[2024-06-23 16:29:53]  *** Listing of results directory ***
[2024-06-23 16:29:53] total 849828
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc      5654 Jun 21 05:24 queuedata.json
[2024-06-23 16:29:53] -rwx------ 1 boinc boinc     32308 Jun 21 05:25 runpilot2-wrapper.sh
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc    469766 Jun 21 05:25 pilot3.tar.gz
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc       100 Jun 23 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 16:29:53] -rwxr-xr-x 1 boinc boinc      7986 Jun 23 10:19 run_atlas
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc       105 Jun 23 10:19 job.xml
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc      6455 Jun 23 10:20 init_data.xml
[2024-06-23 16:29:53] -rw-r--r-- 2 boinc boinc 599111422 Jun 23 10:20 EVNT.40024012._000040.pool.root.1
[2024-06-23 16:29:53] -rw-r--r-- 2 boinc boinc     17537 Jun 23 10:20 start_atlas.sh
[2024-06-23 16:29:53] drwxrwx--x 2 boinc boinc      4096 Jun 23 10:20 shared
[2024-06-23 16:29:53] -rw-r--r-- 2 boinc boinc    482474 Jun 23 10:20 input.tar.gz
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc         0 Jun 23 10:20 boinc_lockfile
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc      2508 Jun 23 10:20 pandaJob.out
[2024-06-23 16:29:53] -rw------- 1 boinc boinc       424 Jun 23 10:20 setup.sh.local
[2024-06-23 16:29:53] -rw------- 1 boinc boinc   1025286 Jun 23 10:20 agis_schedconf.cvmfs.json
[2024-06-23 16:29:53] -rw------- 1 boinc boinc   1321363 Jun 23 10:20 cric_ddmendpoints.json
[2024-06-23 16:29:53] drwx------ 4 boinc boinc      4096 Jun 23 10:20 pilot3
[2024-06-23 16:29:53] -rw------- 1 boinc boinc 262120327 Jun 23 16:28 HITS.40024014._000761.pool.root.1
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc       532 Jun 23 16:28 boinc_task_state.xml
[2024-06-23 16:29:53] -rw------- 1 boinc boinc      1041 Jun 23 16:29 memory_monitor_summary.json
[2024-06-23 16:29:53] -rw------- 1 boinc boinc         0 Jun 23 16:29 agis_ddmendpoints.agis.ALL.json
[2024-06-23 16:29:53] -rw------- 1 boinc boinc    420034 Jun 23 16:29 log.40024014._000761.job.log.tgz.1
[2024-06-23 16:29:53] -rw------- 1 boinc boinc      7754 Jun 23 16:29 heartbeat.json
[2024-06-23 16:29:53] -rw------- 1 boinc boinc        95 Jun 23 16:29 pilot_heartbeat.json
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc        28 Jun 23 16:29 wrapper_checkpoint.txt
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc      8192 Jun 23 16:29 boinc_mmap_file
[2024-06-23 16:29:53] -rw------- 1 boinc boinc      4222 Jun 23 16:29 pilotlog.txt
[2024-06-23 16:29:53] -rw------- 1 boinc boinc   2306298 Jun 23 16:29 log.40024014._000761.job.log.1
[2024-06-23 16:29:53] -rw------- 1 boinc boinc       357 Jun 23 16:29 output.list
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc       620 Jun 23 16:29 runtime_log
[2024-06-23 16:29:53] -rw------- 1 boinc boinc   2744320 Jun 23 16:29 result.tar.gz
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc     11410 Jun 23 16:29 runtime_log.err
[2024-06-23 16:29:53] -rw------- 1 boinc boinc       659 Jun 23 16:29 XCwKDmI5je5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm5FmKDmS3EBam.diag
[2024-06-23 16:29:53] -rw-r--r-- 1 boinc boinc     21252 Jun 23 16:29 stderr.txt
[2024-06-23 16:29:53] HITS file was successfully produced:
[2024-06-23 16:29:53] -rw------- 1 boinc boinc 262120327 Jun 23 16:28 shared/HITS.pool.root.1
[2024-06-23 16:29:53]  *** Contents of shared directory: ***
[2024-06-23 16:29:53] total 844232
[2024-06-23 16:29:53] -rw-r--r-- 2 boinc boinc 599111422 Jun 23 10:20 ATLAS.root_0
[2024-06-23 16:29:53] -rw-r--r-- 2 boinc boinc     17537 Jun 23 10:20 start_atlas.sh
[2024-06-23 16:29:53] -rw-r--r-- 2 boinc boinc    482474 Jun 23 10:20 input.tar.gz
[2024-06-23 16:29:53] -rw------- 1 boinc boinc 262120327 Jun 23 16:28 HITS.pool.root.1
[2024-06-23 16:29:53] -rw------- 1 boinc boinc   2744320 Jun 23 16:29 result.tar.gz
16:29:55 (2137347): run_atlas exited; CPU time 82262.601607
16:29:55 (2137347): called boinc_finish(0)

</stderr_txt>
]]>

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