Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:10:39 (1269891): wrapper (7.7.26015): starting
14:10:39 (1269891): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 14:10:39] Arguments: --nthreads 4
[2024-06-22 14:10:39] Threads: 4
[2024-06-22 14:10:39] Checking for CVMFS
[2024-06-22 14:10:39] No cvmfs_config command found, will try listing directly
[2024-06-22 14:10:39] CVMFS is ok
[2024-06-22 14:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 14:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 14:10:39] Further information can be found at the LHC@home message board.
[2024-06-22 14:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 14:10:39] Checking for apptainer binary...
[2024-06-22 14:10:39] which: no apptainer in ((null))
[2024-06-22 14:10:39] apptainer is not installed, using version from CVMFS
[2024-06-22 14:10:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 14:10:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-22 14:10:40] apptainer works
[2024-06-22 14:10:40] Set ATHENA_PROC_NUMBER=4
[2024-06-22 14:10:40] Set ATHENA_CORE_NUMBER=4
[2024-06-22 14:10:40] Starting ATLAS job with PandaID=6239264026
[2024-06-22 14:10:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 14:13:52]  *** The last 200 lines of the pilot log: ***
[2024-06-22 14:13:52] 2024-06-22 12:13:37,283 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-22 14:13:52] 2024-06-22 12:13:37,284 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6239264026/memory_monitor_summary.json (trf name=prmon)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | INFO     | extracted standard info from prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | WARNING  | GPU info not found in prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | found no stored workdir sizes
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | wrong length of table data, x=[1719058277.0], y=[669.0] (must be same and length>=4)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | ..............................
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . Timing measurements:
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . get job = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . initial setup = 1 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . payload setup = 5 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . stage-in = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . payload execution = 17 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . stage-out = 4 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . log creation = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | ..............................
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 14:13:52] 2024-06-22 12:13:37,288 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6239264026/pilotlog.txt
[2024-06-22 14:13:52] 2024-06-22 12:13:37,310 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-22 14:13:52] - Log from pilotlog.txt -
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | INFO     | extracted standard info from prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | WARNING  | GPU info not found in prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | found no stored workdir sizes
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | wrong length of table data, x=[1719058277.0], y=[669.0] (must be same and length>=4)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | ..............................
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . Timing measurements:
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . get job = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . initial setup = 1 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . payload setup = 5 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . stage-in = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . payload execution = 17 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . stage-out = 4 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . log creation = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | ..............................
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 14:13:52] 2024-06-22 12:13:37,288 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6239264026/pilotlog.txt
[2024-06-22 14:13:52] 2024-06-22 12:13:37,310 | WARNING  | 
[2024-06-22 14:13:52] [begin log extracts]
[2024-06-22 14:13:52] - Log from pilotlog.txt -
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | INFO     | extracted standard info from prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | INFO     | extracted standard memory fields from prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,285 | WARNING  | GPU info not found in prmon json
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | found no stored workdir sizes
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | INFO     | will not add max space = 0 B to job metrics
[2024-06-22 14:13:52] 2024-06-22 12:13:37,286 | WARNING  | wrong length of table data, x=[1719058277.0], y=[669.0] (must be same and length>=4)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | ..............................
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . Timing measurements:
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . get job = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . initial setup = 1 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . payload setup = 5 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . stage-in = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . payload execution = 17 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . stage-out = 4 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | . log creation = 0 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | ..............................
[2024-06-22 14:13:52] 2024-06-22 12:13:37,287 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-22 14:13:52] 2024-06-22 12:13:37,288 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6239264026/pilotlog.txt
[2024-06-22 14:13:52] [end log extracts]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,310 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,310 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 14:11:24,877 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-22 14:13:52] 2024-06-22 12:13:37,378 | INFO     | 
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | job summary report
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | --------------------------------------------------
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | PanDA job id: 6239264026
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | task id: 38921007
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 14:11:24,877 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | pilot state: failed 
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | transexitcode: 65
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | exeerrorcode: 65
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | exitcode: 65
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,379 | INFO     | cpuconsumptiontime: 19 s
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | nevents: 0
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | neventsw: 0
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | pid: 1299426
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | pgrp: 1299426
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | corecount: 4
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | event service: False
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | sizes: {0: 2387068, 5: 2387274, 11: 2387330, 26: 2410484, 27: 2410460, 28: 2414724, 31: 2414880, 32: 2414936, 152: 2415050}
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | --------------------------------------------------
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | 
[2024-06-22 14:13:52] 2024-06-22 12:13:37,380 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-06-22 14:13:52] 2024-06-22 12:13:37,411 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,411 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,411 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue failed_jobs had 1 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 14:13:52] 2024-06-22 12:13:37,412 | INFO     | job 6239264026 has completed (purged errors)
[2024-06-22 14:13:52] 2024-06-22 12:13:37,413 | INFO     | overall cleanup function is called
[2024-06-22 14:13:52] 2024-06-22 12:13:38,418 | INFO     | --- collectZombieJob: --- 10, [1299426]
[2024-06-22 14:13:52] 2024-06-22 12:13:38,418 | INFO     | zombie collector waiting for pid 1299426
[2024-06-22 14:13:52] 2024-06-22 12:13:38,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 14:13:52] 2024-06-22 12:13:39,424 | INFO     | collected zombie processes
[2024-06-22 14:13:52] 2024-06-22 12:13:39,424 | INFO     | will now attempt to kill all subprocesses of pid=1299426
[2024-06-22 14:13:52] 2024-06-22 12:13:39,620 | INFO     | process IDs to be killed: [1299426] (in reverse order)
[2024-06-22 14:13:52] 2024-06-22 12:13:39,755 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 14:13:52] 2024-06-22 12:13:39,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 14:13:52] 2024-06-22 12:13:39,771 | INFO     | did not find any defunct processes belonging to 1299426
[2024-06-22 14:13:52] 2024-06-22 12:13:39,779 | INFO     | did not find any defunct processes belonging to 1299426
[2024-06-22 14:13:52] 2024-06-22 12:13:39,779 | INFO     | ready for new job
[2024-06-22 14:13:52] 2024-06-22 12:13:39,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 14:13:52] 2024-06-22 12:13:39,780 | INFO     | *************************************
[2024-06-22 14:13:52] 2024-06-22 12:13:39,780 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 14:13:52] 2024-06-22 12:13:39,780 | INFO     | *************************************
[2024-06-22 14:13:52] 2024-06-22 12:13:39,780 | INFO     | 
[2024-06-22 14:13:52] 2024-06-22 12:13:39,785 | INFO     | architecture information:
[2024-06-22 14:13:52] 2024-06-22 12:13:39,785 | INFO     | executing command: cat /etc/os-release
[2024-06-22 14:13:52] 2024-06-22 12:13:39,804 | INFO     | cat /etc/os-release:
[2024-06-22 14:13:52] NAME="CentOS Linux"
[2024-06-22 14:13:52] VERSION="7 (Core)"
[2024-06-22 14:13:52] ID="centos"
[2024-06-22 14:13:52] ID_LIKE="rhel fedora"
[2024-06-22 14:13:52] VERSION_ID="7"
[2024-06-22 14:13:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 14:13:52] ANSI_COLOR="0;31"
[2024-06-22 14:13:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 14:13:52] HOME_URL="https://www.centos.org/"
[2024-06-22 14:13:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 14:13:52] 
[2024-06-22 14:13:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 14:13:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 14:13:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 14:13:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 14:13:52] 
[2024-06-22 14:13:52] 2024-06-22 12:13:39,804 | INFO     | *************************************
[2024-06-22 14:13:52] 2024-06-22 12:13:40,307 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-06-22 14:13:52] 2024-06-22 12:13:40,332 | INFO     | sufficient remaining disk space (3166150066176 B)
[2024-06-22 14:13:52] 2024-06-22 12:13:40,333 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 14:13:52] 2024-06-22 12:13:40,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 14:13:52] 2024-06-22 12:13:40,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 14:13:52] 2024-06-22 12:13:40,738 | INFO     | all data control threads have been joined
[2024-06-22 14:13:52] 2024-06-22 12:13:40,848 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 14:13:52] 2024-06-22 12:13:40,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 14:13:52] 2024-06-22 12:13:40,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 14:13:52] 2024-06-22 12:13:41,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 14:13:52] 2024-06-22 12:13:41,233 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 14:13:52] 2024-06-22 12:13:41,233 | INFO     | aborting loop
[2024-06-22 14:13:52] 2024-06-22 12:13:41,234 | INFO     | all payload control threads have been joined
[2024-06-22 14:13:52] 2024-06-22 12:13:41,338 | INFO     | [job] retrieve thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:41,383 | INFO     | [payload] failed_post thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:41,389 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:41,485 | INFO     | [data] copytool_in thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:41,740 | INFO     | [data] control thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:41,929 | INFO     | all job control threads have been joined
[2024-06-22 14:13:52] 2024-06-22 12:13:41,994 | INFO     | [payload] validate_post thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,225 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,239 | INFO     | [job] job monitor thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,242 | INFO     | [payload] control thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 14:13:52] 2024-06-22 12:13:42,521 | INFO     | [job] validate thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,679 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,805 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:42,934 | INFO     | [job] control thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:43,077 | INFO     | [data] copytool_out thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:43,393 | INFO     | [job] queue monitor thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:44,339 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 14:13:52] 2024-06-22 12:13:46,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47236202054720)>', '<ExcThread(monitor, started 47236471883520)>']
[2024-06-22 14:13:52] 2024-06-22 12:13:46,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 14:13:52] 2024-06-22 12:13:46,874 | INFO     | [monitor] control thread has ended
[2024-06-22 14:13:52] 2024-06-22 12:13:51,244 | INFO     | all workflow threads have been joined
[2024-06-22 14:13:52] 2024-06-22 12:13:51,244 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 14:13:52] 2024-06-22 12:13:51,244 | INFO     | traces error code: 0
[2024-06-22 14:13:52] 2024-06-22 12:13:51,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 14:13:52] 2024-06-22 12:13:51,350 [wrapper] ==== pilot stdout END ====
[2024-06-22 14:13:52] 2024-06-22 12:13:51,352 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 14:13:52] 2024-06-22 12:13:51,356 [wrapper] pilotpid: 1277417
[2024-06-22 14:13:52] 2024-06-22 12:13:51,358 [wrapper] Pilot exit status: 0
[2024-06-22 14:13:52] 2024-06-22 12:13:51,369 [wrapper] pandaids: 6239264026
[2024-06-22 14:13:52] 2024-06-22 12:13:51,452 [wrapper] cleanup supervisor_pilot 1277422 1277418
[2024-06-22 14:13:52] 2024-06-22 12:13:51,454 [wrapper] Test setup, not cleaning
[2024-06-22 14:13:52] 2024-06-22 12:13:51,456 [wrapper] ==== wrapper stdout END ====
[2024-06-22 14:13:52] 2024-06-22 12:13:51,457 [wrapper] ==== wrapper stderr END ====
[2024-06-22 14:13:52] 2024-06-22 12:13:51,461 [wrapper] apfmon messages muted
[2024-06-22 14:13:52]  *** Error codes and diagnostics ***
[2024-06-22 14:13:52]     "exeErrorCode": 65,
[2024-06-22 14:13:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 14:13:52]     "pilotErrorCode": 1305,
[2024-06-22 14:13:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-22 14:11:24,877 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-22 14:13:52]  *** Listing of results directory ***
[2024-06-22 14:13:52] total 576052
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc    469766 Jun 21 04:36 pilot3.tar.gz
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc      5654 Jun 21 04:55 queuedata.json
[2024-06-22 14:13:52] -rwx------ 1 boinc boinc     32308 Jun 21 04:55 runpilot2-wrapper.sh
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc       100 Jun 22 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 14:13:52] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 13:38 run_atlas
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc       105 Jun 22 13:38 job.xml
[2024-06-22 14:13:52] -rw-r--r-- 2 boinc boinc     17537 Jun 22 14:10 start_atlas.sh
[2024-06-22 14:13:52] drwxrwx--x 2 boinc boinc      4096 Jun 22 14:10 shared
[2024-06-22 14:13:52] -rw-r--r-- 2 boinc boinc    482537 Jun 22 14:10 input.tar.gz
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc      6642 Jun 22 14:10 init_data.xml
[2024-06-22 14:13:52] -rw-r--r-- 2 boinc boinc 586150170 Jun 22 14:10 EVNT.38776201._000766.pool.root.1
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc         0 Jun 22 14:10 boinc_lockfile
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc      2629 Jun 22 14:10 pandaJob.out
[2024-06-22 14:13:52] -rw------- 1 boinc boinc       424 Jun 22 14:10 setup.sh.local
[2024-06-22 14:13:52] -rw------- 1 boinc boinc   1025930 Jun 22 14:10 agis_schedconf.cvmfs.json
[2024-06-22 14:13:52] -rw------- 1 boinc boinc         0 Jun 22 14:10 agis_ddmendpoints.agis.ALL.json
[2024-06-22 14:13:52] -rw------- 1 boinc boinc   1321363 Jun 22 14:10 cric_ddmendpoints.json
[2024-06-22 14:13:52] drwx------ 4 boinc boinc      4096 Jun 22 14:10 pilot3
[2024-06-22 14:13:52] -rw------- 1 boinc boinc       962 Jun 22 14:11 memory_monitor_summary.json
[2024-06-22 14:13:52] -rw------- 1 boinc boinc     20377 Jun 22 14:11 log.38921007._052115.job.log.tgz.1
[2024-06-22 14:13:52] -rw------- 1 boinc boinc        95 Jun 22 14:12 pilot_heartbeat.json
[2024-06-22 14:13:52] -rw------- 1 boinc boinc      8339 Jun 22 14:13 heartbeat.json
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc       524 Jun 22 14:13 boinc_task_state.xml
[2024-06-22 14:13:52] -rw------- 1 boinc boinc      4222 Jun 22 14:13 pilotlog.txt
[2024-06-22 14:13:52] -rw------- 1 boinc boinc     75913 Jun 22 14:13 log.38921007._052115.job.log.1
[2024-06-22 14:13:52] -rw------- 1 boinc boinc       188 Jun 22 14:13 output.list
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc       620 Jun 22 14:13 runtime_log
[2024-06-22 14:13:52] -rw------- 1 boinc boinc    112640 Jun 22 14:13 result.tar.gz
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc     11256 Jun 22 14:13 runtime_log.err
[2024-06-22 14:13:52] -rw------- 1 boinc boinc       635 Jun 22 14:13 nNGODmFcje5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmznXKDmwLC74m.diag
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc        22 Jun 22 14:13 wrapper_checkpoint.txt
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc      8192 Jun 22 14:13 boinc_mmap_file
[2024-06-22 14:13:52] -rw-r--r-- 1 boinc boinc     21367 Jun 22 14:13 stderr.txt
[2024-06-22 14:13:52] No HITS result produced
[2024-06-22 14:13:52]  *** Contents of shared directory: ***
[2024-06-22 14:13:52] total 573024
[2024-06-22 14:13:52] -rw-r--r-- 2 boinc boinc     17537 Jun 22 14:10 start_atlas.sh
[2024-06-22 14:13:52] -rw-r--r-- 2 boinc boinc    482537 Jun 22 14:10 input.tar.gz
[2024-06-22 14:13:52] -rw-r--r-- 2 boinc boinc 586150170 Jun 22 14:10 ATLAS.root_0
[2024-06-22 14:13:52] -rw------- 1 boinc boinc    112640 Jun 22 14:13 result.tar.gz
14:13:54 (1269891): run_atlas exited; CPU time 19.675513
14:13:54 (1269891): called boinc_finish(0)

</stderr_txt>
]]>

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