Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:18:52 (839311): wrapper (7.7.26015): starting
19:18:52 (839311): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 19:18:52] Arguments: --nthreads 4
[2024-06-22 19:18:52] Threads: 4
[2024-06-22 19:18:52] Checking for CVMFS
[2024-06-22 19:18:52] No cvmfs_config command found, will try listing directly
[2024-06-22 19:18:52] CVMFS is ok
[2024-06-22 19:18:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 19:18:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 19:18:52] Further information can be found at the LHC@home message board.
[2024-06-22 19:18:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 19:18:52] Checking for apptainer binary...
[2024-06-22 19:18:52] which: no apptainer in ((null))
[2024-06-22 19:18:52] apptainer is not installed, using version from CVMFS
[2024-06-22 19:18:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 19:18:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-06-22 19:18:53] apptainer works
[2024-06-22 19:18:53] Set ATHENA_PROC_NUMBER=4
[2024-06-22 19:18:53] Set ATHENA_CORE_NUMBER=4
[2024-06-22 19:18:53] Starting ATLAS job with PandaID=6239230858
[2024-06-22 19:18:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 10:19:51]  *** The last 200 lines of the pilot log: ***
[2024-06-23 10:19:51] 2024-06-23 08:19:37,043 | INFO     | fitting pss+swap vs Time
[2024-06-23 10:19:51] 2024-06-23 08:19:37,047 | INFO     | model: linear, x: [1719076810.0, 1719076871.0, 1719076932.0, 1719076993.0, 1719077054.0, 1719077115.0, 1719077176.0, 1719077237.0, 1719077298.0, 1719077359.0, 1719
[2024-06-23 10:19:51] 2024-06-23 08:19:37,048 | INFO     | sum of square deviations: 214935267170.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,060 | INFO     | sum of deviations: 248578597047.99994
[2024-06-23 10:19:51] 2024-06-23 08:19:37,061 | INFO     | mean x: 1719103772.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,061 | INFO     | mean y: 2373054.294915254
[2024-06-23 10:19:51] 2024-06-23 08:19:37,061 | INFO     | -- intersect: -1985818132.0574496
[2024-06-23 10:19:51] 2024-06-23 08:19:37,061 | INFO     | intersect: -1985818132.0574496
[2024-06-23 10:19:51] 2024-06-23 08:19:37,061 | INFO     | chi2: 4.3198432865353364
[2024-06-23 10:19:51] 2024-06-23 08:19:37,062 | INFO     | model: linear, x: [1719076810.0, 1719076871.0, 1719076932.0, 1719076993.0, 1719077054.0, 1719077115.0, 1719077176.0, 1719077237.0, 1719077298.0, 1719077359.0, 1719
[2024-06-23 10:19:51] 2024-06-23 08:19:37,062 | INFO     | sum of square deviations: 211312836460.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,072 | INFO     | sum of deviations: 302421685031.4999
[2024-06-23 10:19:51] 2024-06-23 08:19:37,073 | INFO     | mean x: 1719103619.5
[2024-06-23 10:19:51] 2024-06-23 08:19:37,073 | INFO     | mean y: 2375310.3170454544
[2024-06-23 10:19:51] 2024-06-23 08:19:37,073 | INFO     | -- intersect: -2457930566.3273797
[2024-06-23 10:19:51] 2024-06-23 08:19:37,073 | INFO     | intersect: -2457930566.3273797
[2024-06-23 10:19:51] 2024-06-23 08:19:37,074 | INFO     | chi2: 3.567847968166975
[2024-06-23 10:19:51] 2024-06-23 08:19:37,074 | INFO     | current chi2=3.567847968166975 (change=17.407930531005157 %)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,074 | INFO     | right removable region: 879
[2024-06-23 10:19:51] 2024-06-23 08:19:37,074 | INFO     | model: linear, x: [1719077115.0, 1719077176.0, 1719077237.0, 1719077298.0, 1719077359.0, 1719077420.0, 1719077481.0, 1719077542.0, 1719077603.0, 1719077664.0, 1719
[2024-06-23 10:19:51] 2024-06-23 08:19:37,075 | INFO     | sum of square deviations: 211312836460.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,085 | INFO     | sum of deviations: 49603899846.000015
[2024-06-23 10:19:51] 2024-06-23 08:19:37,085 | INFO     | mean x: 1719103924.5
[2024-06-23 10:19:51] 2024-06-23 08:19:37,085 | INFO     | mean y: 2381423.643181818
[2024-06-23 10:19:51] 2024-06-23 08:19:37,085 | INFO     | -- intersect: -401163672.4537388
[2024-06-23 10:19:51] 2024-06-23 08:19:37,085 | INFO     | intersect: -401163672.4537388
[2024-06-23 10:19:51] 2024-06-23 08:19:37,086 | INFO     | chi2: 2.154613775745984
[2024-06-23 10:19:51] 2024-06-23 08:19:37,086 | INFO     | current chi2=2.154613775745984 (change=50.12287176107125 %)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,087 | INFO     | model: linear, x: [1719077420.0, 1719077481.0, 1719077542.0, 1719077603.0, 1719077664.0, 1719077725.0, 1719077786.0, 1719077847.0, 1719077908.0, 1719077969.0, 1719
[2024-06-23 10:19:51] 2024-06-23 08:19:37,087 | INFO     | sum of square deviations: 207731336750.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,097 | INFO     | sum of deviations: -97751562917.99997
[2024-06-23 10:19:51] 2024-06-23 08:19:37,097 | INFO     | mean x: 1719104077.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,097 | INFO     | mean y: 2387697.9097142857
[2024-06-23 10:19:51] 2024-06-23 08:19:37,097 | INFO     | -- intersect: 811341767.981936
[2024-06-23 10:19:51] 2024-06-23 08:19:37,097 | INFO     | intersect: 811341767.981936
[2024-06-23 10:19:51] 2024-06-23 08:19:37,098 | INFO     | chi2: 1.0756752406274663
[2024-06-23 10:19:51] 2024-06-23 08:19:37,098 | INFO     | current chi2=1.0756752406274663 (change=50.07572806151583 %)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,099 | INFO     | model: linear, x: [1719077725.0, 1719077786.0, 1719077847.0, 1719077908.0, 1719077969.0, 1719078030.0, 1719078091.0, 1719078152.0, 1719078213.0, 1719078274.0, 1719
[2024-06-23 10:19:51] 2024-06-23 08:19:37,099 | INFO     | sum of square deviations: 204190535477.5
[2024-06-23 10:19:51] 2024-06-23 08:19:37,109 | INFO     | sum of deviations: -109663616931.99998
[2024-06-23 10:19:51] 2024-06-23 08:19:37,110 | INFO     | mean x: 1719104229.5
[2024-06-23 10:19:51] 2024-06-23 08:19:37,110 | INFO     | mean y: 2388208.027586207
[2024-06-23 10:19:51] 2024-06-23 08:19:37,110 | INFO     | -- intersect: 925659148.3246334
[2024-06-23 10:19:51] 2024-06-23 08:19:37,110 | INFO     | intersect: 925659148.3246334
[2024-06-23 10:19:51] 2024-06-23 08:19:37,110 | INFO     | chi2: 1.0392529942969493
[2024-06-23 10:19:51] 2024-06-23 08:19:37,111 | INFO     | current chi2=1.0392529942969493 (change=3.385989093629329 %)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,111 | INFO     | left removable region: 30
[2024-06-23 10:19:51] 2024-06-23 08:19:37,111 | INFO     | model: linear, x: [1719078640.0, 1719078701.0, 1719078762.0, 1719078823.0, 1719078884.0, 1719078945.0, 1719079006.0, 1719079067.0, 1719079128.0, 1719079189.0, 1719
[2024-06-23 10:19:51] 2024-06-23 08:19:37,112 | INFO     | sum of square deviations: 189758348600.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,121 | INFO     | sum of deviations: 8687027812.000015
[2024-06-23 10:19:51] 2024-06-23 08:19:37,121 | INFO     | mean x: 1719104504.0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,121 | INFO     | mean y: 2387738.023557126
[2024-06-23 10:19:51] 2024-06-23 08:19:37,121 | INFO     | -- intersect: -76311875.18535806
[2024-06-23 10:19:51] 2024-06-23 08:19:37,121 | INFO     | intersect: -76311875.18535806
[2024-06-23 10:19:51] 2024-06-23 08:19:37,122 | INFO     | chi2: 0.1990624000431423
[2024-06-23 10:19:51] 2024-06-23 08:19:37,122 | INFO     | -- intersect: -76311875.18535806
[2024-06-23 10:19:51] 2024-06-23 08:19:37,122 | INFO     | current memory leak: 0.05 B/s (using 849 data points, chi2=0.20)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | ..............................
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . Timing measurements:
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . get job = 0 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . initial setup = 2 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . payload setup = 8 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . stage-in = 0 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . payload execution = 53959 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . stage-out = 1 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | . log creation = 0 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,123 | INFO     | ..............................
[2024-06-23 10:19:51] 2024-06-23 08:19:37,187 | INFO     | 
[2024-06-23 10:19:51] 2024-06-23 08:19:37,190 | INFO     | job summary report
[2024-06-23 10:19:51] 2024-06-23 08:19:37,190 | WARNING  | process 852889 is no longer using CPU - aborting
[2024-06-23 10:19:51] 2024-06-23 08:19:37,190 | INFO     | --------------------------------------------------
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | aborting job monitoring since job object (job id=6239230858) has expired
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | PanDA job id: 6239230858
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | task id: 38921013
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | errors: (none)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | pilot state: finished 
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | transexitcode: 0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | exeerrorcode: 0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | exeerrordiag: 
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | exitcode: 0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,191 | INFO     | exitmsg: OK
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | cpuconsumptiontime: 208420 s
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | nevents: 400
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | neventsw: 0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | pid: 852889
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | pgrp: 852889
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | corecount: 4
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | event service: False
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | sizes: {0: 2387070, 1: 2387070, 12: 2387098, 15: 2387332, 22: 2387360, 53971: 2436367, 53973: 2445349, 53974: 2445405, 53986: 2445575}
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | --------------------------------------------------
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | 
[2024-06-23 10:19:51] 2024-06-23 08:19:37,192 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | job 6239230858 has completed (purged errors)
[2024-06-23 10:19:51] 2024-06-23 08:19:37,209 | INFO     | overall cleanup function is called
[2024-06-23 10:19:51] 2024-06-23 08:19:38,216 | INFO     | --- collectZombieJob: --- 10, [852889]
[2024-06-23 10:19:51] 2024-06-23 08:19:38,216 | INFO     | zombie collector waiting for pid 852889
[2024-06-23 10:19:51] 2024-06-23 08:19:38,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 10:19:51] 2024-06-23 08:19:39,221 | INFO     | collected zombie processes
[2024-06-23 10:19:51] 2024-06-23 08:19:39,221 | INFO     | will now attempt to kill all subprocesses of pid=852889
[2024-06-23 10:19:51] 2024-06-23 08:19:39,400 | INFO     | process IDs to be killed: [852889] (in reverse order)
[2024-06-23 10:19:51] 2024-06-23 08:19:39,699 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 10:19:51] 2024-06-23 08:19:39,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 10:19:51] 2024-06-23 08:19:39,711 | INFO     | did not find any defunct processes belonging to 852889
[2024-06-23 10:19:51] 2024-06-23 08:19:39,717 | INFO     | did not find any defunct processes belonging to 852889
[2024-06-23 10:19:51] 2024-06-23 08:19:39,717 | INFO     | ready for new job
[2024-06-23 10:19:51] 2024-06-23 08:19:39,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 10:19:51] 2024-06-23 08:19:39,721 | INFO     | *************************************
[2024-06-23 10:19:51] 2024-06-23 08:19:39,721 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 10:19:51] 2024-06-23 08:19:39,721 | INFO     | *************************************
[2024-06-23 10:19:51] 2024-06-23 08:19:39,721 | INFO     | 
[2024-06-23 10:19:51] 2024-06-23 08:19:39,724 | INFO     | architecture information:
[2024-06-23 10:19:51] 2024-06-23 08:19:39,724 | INFO     | executing command: cat /etc/os-release
[2024-06-23 10:19:51] 2024-06-23 08:19:39,744 | INFO     | cat /etc/os-release:
[2024-06-23 10:19:51] NAME="CentOS Linux"
[2024-06-23 10:19:51] VERSION="7 (Core)"
[2024-06-23 10:19:51] ID="centos"
[2024-06-23 10:19:51] ID_LIKE="rhel fedora"
[2024-06-23 10:19:51] VERSION_ID="7"
[2024-06-23 10:19:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 10:19:51] ANSI_COLOR="0;31"
[2024-06-23 10:19:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 10:19:51] HOME_URL="https://www.centos.org/"
[2024-06-23 10:19:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 10:19:51] 
[2024-06-23 10:19:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 10:19:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 10:19:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 10:19:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 10:19:51] 
[2024-06-23 10:19:51] 2024-06-23 08:19:39,744 | INFO     | *************************************
[2024-06-23 10:19:51] 2024-06-23 08:19:40,246 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-06-23 10:19:51] 2024-06-23 08:19:40,268 | INFO     | sufficient remaining disk space (1661448749056 B)
[2024-06-23 10:19:51] 2024-06-23 08:19:40,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 10:19:51] 2024-06-23 08:19:40,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 10:19:51] 2024-06-23 08:19:40,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 10:19:51] 2024-06-23 08:19:40,269 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 10:19:51] 2024-06-23 08:19:40,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 10:19:51] 2024-06-23 08:19:40,270 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 10:19:51] 2024-06-23 08:19:40,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 10:19:51] 2024-06-23 08:19:40,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 10:19:51] 2024-06-23 08:19:40,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 10:19:51] 2024-06-23 08:19:40,698 | INFO     | aborting loop
[2024-06-23 10:19:51] 2024-06-23 08:19:41,115 | INFO     | all payload control threads have been joined
[2024-06-23 10:19:51] 2024-06-23 08:19:41,205 | INFO     | all data control threads have been joined
[2024-06-23 10:19:51] 2024-06-23 08:19:41,274 | INFO     | [job] retrieve thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:41,315 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:41,582 | INFO     | [data] copytool_in thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:41,607 | INFO     | [payload] validate_post thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:41,703 | INFO     | [job] job monitor thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:41,835 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:41,907 | INFO     | all job control threads have been joined
[2024-06-23 10:19:51] 2024-06-23 08:19:42,117 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,120 | INFO     | [payload] control thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 10:19:51] 2024-06-23 08:19:42,210 | INFO     | [data] control thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,275 | INFO     | [data] copytool_out thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,376 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,542 | INFO     | [job] validate thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,628 | INFO     | [payload] failed_post thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:42,911 | INFO     | [job] control thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:43,201 | INFO     | [job] queue monitor thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:44,275 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 10:19:51] 2024-06-23 08:19:45,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47952198251584)>', '<ExcThread(monitor, started 47952529766144)>']
[2024-06-23 10:19:51] 2024-06-23 08:19:45,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 10:19:51] 2024-06-23 08:19:45,295 | INFO     | [monitor] control thread has ended
[2024-06-23 10:19:51] 2024-06-23 08:19:50,209 | INFO     | all workflow threads have been joined
[2024-06-23 10:19:51] 2024-06-23 08:19:50,209 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 10:19:51] 2024-06-23 08:19:50,209 | INFO     | traces error code: 0
[2024-06-23 10:19:51] 2024-06-23 08:19:50,210 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 10:19:51] 2024-06-23 08:19:50,334 [wrapper] ==== pilot stdout END ====
[2024-06-23 10:19:51] 2024-06-23 08:19:50,337 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 10:19:51] 2024-06-23 08:19:50,342 [wrapper] pilotpid: 845831
[2024-06-23 10:19:51] 2024-06-23 08:19:50,348 [wrapper] Pilot exit status: 0
[2024-06-23 10:19:51] 2024-06-23 08:19:50,395 [wrapper] pandaids: 6239230858
[2024-06-23 10:19:51] 2024-06-23 08:19:50,456 [wrapper] cleanup supervisor_pilot 2133002 845832
[2024-06-23 10:19:51] 2024-06-23 08:19:50,459 [wrapper] Test setup, not cleaning
[2024-06-23 10:19:51] 2024-06-23 08:19:50,461 [wrapper] ==== wrapper stdout END ====
[2024-06-23 10:19:51] 2024-06-23 08:19:50,464 [wrapper] ==== wrapper stderr END ====
[2024-06-23 10:19:51] 2024-06-23 08:19:50,469 [wrapper] apfmon messages muted
[2024-06-23 10:19:51]  *** Error codes and diagnostics ***
[2024-06-23 10:19:51]     "exeErrorCode": 0,
[2024-06-23 10:19:51]     "exeErrorDiag": "",
[2024-06-23 10:19:51]     "pilotErrorCode": 0,
[2024-06-23 10:19:51]     "pilotErrorDiag": "",
[2024-06-23 10:19:51]  *** Listing of results directory ***
[2024-06-23 10:19:51] total 887296
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc    469766 Jun 21 03:50 pilot3.tar.gz
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc      5654 Jun 21 04:13 queuedata.json
[2024-06-23 10:19:51] -rwx------ 1 boinc boinc     32308 Jun 21 04:17 runpilot2-wrapper.sh
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc       100 Jun 22 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 10:19:51] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 19:18 run_atlas
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc       105 Jun 22 19:18 job.xml
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc      6455 Jun 22 19:18 init_data.xml
[2024-06-23 10:19:51] -rw-r--r-- 2 boinc boinc 542006752 Jun 22 19:18 EVNT.38776210._000821.pool.root.1
[2024-06-23 10:19:51] -rw-r--r-- 2 boinc boinc     17537 Jun 22 19:18 start_atlas.sh
[2024-06-23 10:19:51] drwxrwx--x 2 boinc boinc      4096 Jun 22 19:18 shared
[2024-06-23 10:19:51] -rw-r--r-- 2 boinc boinc    482534 Jun 22 19:18 input.tar.gz
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc         0 Jun 22 19:18 boinc_lockfile
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc      2645 Jun 22 19:18 pandaJob.out
[2024-06-23 10:19:51] -rw------- 1 boinc boinc       424 Jun 22 19:18 setup.sh.local
[2024-06-23 10:19:51] -rw------- 1 boinc boinc   1025675 Jun 22 19:19 agis_schedconf.cvmfs.json
[2024-06-23 10:19:51] -rw------- 1 boinc boinc   1321363 Jun 22 19:19 cric_ddmendpoints.json
[2024-06-23 10:19:51] drwx------ 4 boinc boinc      4096 Jun 22 19:19 pilot3
[2024-06-23 10:19:51] -rw------- 1 boinc boinc 348139302 Jun 23 10:18 HITS.38921013._050787.pool.root.1
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc       533 Jun 23 10:18 boinc_task_state.xml
[2024-06-23 10:19:51] -rw------- 1 boinc boinc      1042 Jun 23 10:19 memory_monitor_summary.json
[2024-06-23 10:19:51] -rw------- 1 boinc boinc         0 Jun 23 10:19 agis_ddmendpoints.agis.ALL.json
[2024-06-23 10:19:51] -rw------- 1 boinc boinc    789487 Jun 23 10:19 log.38921013._050787.job.log.tgz.1
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc      8192 Jun 23 10:19 boinc_mmap_file
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc        29 Jun 23 10:19 wrapper_checkpoint.txt
[2024-06-23 10:19:51] -rw------- 1 boinc boinc        95 Jun 23 10:19 pilot_heartbeat.json
[2024-06-23 10:19:51] -rw------- 1 boinc boinc      7765 Jun 23 10:19 heartbeat.json
[2024-06-23 10:19:51] -rw------- 1 boinc boinc      4345 Jun 23 10:19 pilotlog.txt
[2024-06-23 10:19:51] -rw------- 1 boinc boinc   6667602 Jun 23 10:19 log.38921013._050787.job.log.1
[2024-06-23 10:19:51] -rw------- 1 boinc boinc       357 Jun 23 10:19 output.list
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc       620 Jun 23 10:19 runtime_log
[2024-06-23 10:19:51] -rw------- 1 boinc boinc   7475200 Jun 23 10:19 result.tar.gz
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc     11410 Jun 23 10:19 runtime_log.err
[2024-06-23 10:19:51] -rw------- 1 boinc boinc       661 Jun 23 10:19 3MjNDmw0ie5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmzmXKDmuyj94m.diag
[2024-06-23 10:19:51] -rw-r--r-- 1 boinc boinc     21390 Jun 23 10:19 stderr.txt
[2024-06-23 10:19:51] HITS file was successfully produced:
[2024-06-23 10:19:51] -rw------- 1 boinc boinc 348139302 Jun 23 10:18 shared/HITS.pool.root.1
[2024-06-23 10:19:51]  *** Contents of shared directory: ***
[2024-06-23 10:19:51] total 877084
[2024-06-23 10:19:51] -rw-r--r-- 2 boinc boinc 542006752 Jun 22 19:18 ATLAS.root_0
[2024-06-23 10:19:51] -rw-r--r-- 2 boinc boinc     17537 Jun 22 19:18 start_atlas.sh
[2024-06-23 10:19:51] -rw-r--r-- 2 boinc boinc    482534 Jun 22 19:18 input.tar.gz
[2024-06-23 10:19:51] -rw------- 1 boinc boinc 348139302 Jun 23 10:18 HITS.pool.root.1
[2024-06-23 10:19:51] -rw------- 1 boinc boinc   7475200 Jun 23 10:19 result.tar.gz
10:19:52 (839311): run_atlas exited; CPU time 207955.581656
10:19:52 (839311): called boinc_finish(0)

</stderr_txt>
]]>

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