Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:11:40 (3170987): wrapper (7.7.26015): starting
21:11:40 (3170987): wrapper: running run_atlas (--nthreads 3)
[2024-06-20 21:11:40] Arguments: --nthreads 3
[2024-06-20 21:11:40] Threads: 3
[2024-06-20 21:11:40] Checking for CVMFS
[2024-06-20 21:11:40] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 21:11:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 21:11:40] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 21:11:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 21:11:41] 2.11.3.0 3128561 11 38324 134112 0 188 3930638 6144001 1023 130560 0 91094 99.973 41611 7799 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-20 21:11:41] CVMFS is ok
[2024-06-20 21:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 21:11:41] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-20 21:11:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-20 21:11:41] Further information can be found at the LHC@home message board.
[2024-06-20 21:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 21:11:41] Checking for apptainer binary...
[2024-06-20 21:11:41] apptainer is not installed, using version from CVMFS
[2024-06-20 21:11:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 21:11:41] h12dsi-n6
[2024-06-20 21:11:41] apptainer works
[2024-06-20 21:11:41] Set ATHENA_PROC_NUMBER=3
[2024-06-20 21:11:41] Set ATHENA_CORE_NUMBER=3
[2024-06-20 21:11:41] Starting ATLAS job with PandaID=6239102073
[2024-06-20 21:11:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/54 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 02:20:19]  *** The last 200 lines of the pilot log: ***
[2024-06-21 02:20:19] 2024-06-21 09:20:05,542 | INFO     | intersect: -33748063298.114853
[2024-06-21 02:20:19] 2024-06-21 09:20:05,542 | INFO     | chi2: 5.905112464275909
[2024-06-21 02:20:19] 2024-06-21 09:20:05,543 | INFO     | model: linear, x: [1718943148.0, 1718943209.0, 1718943270.0, 1718943331.0, 1718943392.0, 1718943453.0, 1718943514.0, 1718943575.0, 1718943636.0, 1718943697.0, 1718
[2024-06-21 02:20:19] 2024-06-21 09:20:05,543 | INFO     | sum of square deviations: 8205826414.5
[2024-06-21 02:20:19] 2024-06-21 09:20:05,545 | INFO     | sum of deviations: 183618909721.0001
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | mean x: 1718952206.5
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | mean y: 2268020.0738255032
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | -- intersect: -38462124726.80463
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | intersect: -38462124726.80463
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | chi2: 5.2541040397144885
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | current chi2=5.2541040397144885 (change=11.024488161738136 %)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,546 | INFO     | right removable region: 297
[2024-06-21 02:20:19] 2024-06-21 09:20:05,547 | INFO     | model: linear, x: [1718943453.0, 1718943514.0, 1718943575.0, 1718943636.0, 1718943697.0, 1718943758.0, 1718943819.0, 1718943880.0, 1718943941.0, 1718944002.0, 1718
[2024-06-21 02:20:19] 2024-06-21 09:20:05,547 | INFO     | sum of square deviations: 8205826414.5
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | sum of deviations: 97723304851.00003
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | mean x: 1718952511.5
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | mean y: 2288899.536912752
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | -- intersect: -20468741295.408073
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | intersect: -20468741295.408073
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | chi2: 3.3012417177350275
[2024-06-21 02:20:19] 2024-06-21 09:20:05,549 | INFO     | current chi2=3.3012417177350275 (change=44.09519314481288 %)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,550 | INFO     | model: linear, x: [1718943758.0, 1718943819.0, 1718943880.0, 1718943941.0, 1718944002.0, 1718944063.0, 1718944124.0, 1718944185.0, 1718944246.0, 1718944307.0, 1718
[2024-06-21 02:20:19] 2024-06-21 09:20:05,550 | INFO     | sum of square deviations: 7799669962.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,552 | INFO     | sum of deviations: 39280867772.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,552 | INFO     | mean x: 1718952664.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,552 | INFO     | mean y: 2310842.723549488
[2024-06-21 02:20:19] 2024-06-21 09:20:05,552 | INFO     | -- intersect: -8654716009.678946
[2024-06-21 02:20:19] 2024-06-21 09:20:05,552 | INFO     | intersect: -8654716009.678946
[2024-06-21 02:20:19] 2024-06-21 09:20:05,553 | INFO     | chi2: 1.7007237643959539
[2024-06-21 02:20:19] 2024-06-21 09:20:05,553 | INFO     | current chi2=1.7007237643959539 (change=48.48230121232033 %)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,553 | INFO     | model: linear, x: [1718944063.0, 1718944124.0, 1718944185.0, 1718944246.0, 1718944307.0, 1718944368.0, 1718944429.0, 1718944490.0, 1718944551.0, 1718944612.0, 1718
[2024-06-21 02:20:19] 2024-06-21 09:20:05,553 | INFO     | sum of square deviations: 7407141672.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,555 | INFO     | sum of deviations: -3812000837.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,555 | INFO     | mean x: 1718952816.5
[2024-06-21 02:20:19] 2024-06-21 09:20:05,555 | INFO     | mean y: 2327525.034722222
[2024-06-21 02:20:19] 2024-06-21 09:20:05,555 | INFO     | -- intersect: 886966953.4975815
[2024-06-21 02:20:19] 2024-06-21 09:20:05,555 | INFO     | intersect: 886966953.4975815
[2024-06-21 02:20:19] 2024-06-21 09:20:05,556 | INFO     | chi2: 0.6837504035290559
[2024-06-21 02:20:19] 2024-06-21 09:20:05,556 | INFO     | current chi2=0.6837504035290559 (change=59.796504415171526 %)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,556 | INFO     | model: linear, x: [1718944368.0, 1718944429.0, 1718944490.0, 1718944551.0, 1718944612.0, 1718944673.0, 1718944734.0, 1718944795.0, 1718944856.0, 1718944917.0, 1718
[2024-06-21 02:20:19] 2024-06-21 09:20:05,556 | INFO     | sum of square deviations: 7028008982.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,558 | INFO     | sum of deviations: -7113156503.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,558 | INFO     | mean x: 1718952969.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,558 | INFO     | mean y: 2328846.300353357
[2024-06-21 02:20:19] 2024-06-21 09:20:05,558 | INFO     | -- intersect: 1742107711.2832422
[2024-06-21 02:20:19] 2024-06-21 09:20:05,558 | INFO     | intersect: 1742107711.2832422
[2024-06-21 02:20:19] 2024-06-21 09:20:05,559 | INFO     | chi2: 0.6771271754143829
[2024-06-21 02:20:19] 2024-06-21 09:20:05,559 | INFO     | current chi2=0.6771271754143829 (change=0.9686616754430216 %)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,559 | INFO     | left removable region: 40
[2024-06-21 02:20:19] 2024-06-21 09:20:05,559 | INFO     | model: linear, x: [1718945588.0, 1718945649.0, 1718945710.0, 1718945771.0, 1718945832.0, 1718945893.0, 1718945954.0, 1718946015.0, 1718946076.0, 1718946137.0, 1718
[2024-06-21 02:20:19] 2024-06-21 09:20:05,559 | INFO     | sum of square deviations: 5263458688.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,561 | INFO     | sum of deviations: 5326870078.999999
[2024-06-21 02:20:19] 2024-06-21 09:20:05,561 | INFO     | mean x: 1718953396.0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,561 | INFO     | mean y: 2337091.0817120625
[2024-06-21 02:20:19] 2024-06-21 09:20:05,561 | INFO     | -- intersect: -1737325354.3030663
[2024-06-21 02:20:19] 2024-06-21 09:20:05,561 | INFO     | intersect: -1737325354.3030663
[2024-06-21 02:20:19] 2024-06-21 09:20:05,561 | INFO     | chi2: 0.0009811014844860382
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | -- intersect: -1737325354.3030663
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | current memory leak: 1.01 B/s (using 257 data points, chi2=0.00)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | ..............................
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | . Timing measurements:
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | . get job = 0 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | . initial setup = 2 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | . payload setup = 8 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,562 | INFO     | . stage-in = 0 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,563 | INFO     | . payload execution = 18446 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,563 | INFO     | . stage-out = 3 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,563 | INFO     | . log creation = 0 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,563 | INFO     | ..............................
[2024-06-21 02:20:19] 2024-06-21 09:20:05,801 | INFO     | 
[2024-06-21 02:20:19] 2024-06-21 09:20:05,801 | INFO     | job summary report
[2024-06-21 02:20:19] 2024-06-21 09:20:05,801 | INFO     | --------------------------------------------------
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | PanDA job id: 6239102073
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | task id: 40024049
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | errors: (none)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | pilot state: finished 
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | transexitcode: 0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | exeerrorcode: 0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | exeerrordiag: 
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | exitcode: 0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | exitmsg: OK
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | cpuconsumptiontime: 52760 s
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | nevents: 400
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | neventsw: 0
[2024-06-21 02:20:19] 2024-06-21 09:20:05,802 | INFO     | pid: 3183243
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | pgrp: 3183243
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | corecount: 3
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | event service: False
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | sizes: {0: 2386810, 7: 2387016, 11: 2387044, 18458: 2419505, 18462: 2428481, 18465: 2428537, 18472: 2428835}
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | --------------------------------------------------
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | 
[2024-06-21 02:20:19] 2024-06-21 09:20:05,803 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/54
[2024-06-21 02:20:19] 2024-06-21 09:20:05,840 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,840 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,840 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,840 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,842 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 02:20:19] 2024-06-21 09:20:05,842 | INFO     | job 6239102073 has completed (purged errors)
[2024-06-21 02:20:19] 2024-06-21 09:20:05,843 | INFO     | overall cleanup function is called
[2024-06-21 02:20:19] 2024-06-21 09:20:06,851 | INFO     | --- collectZombieJob: --- 10, [3183243]
[2024-06-21 02:20:19] 2024-06-21 09:20:06,851 | INFO     | zombie collector waiting for pid 3183243
[2024-06-21 02:20:19] 2024-06-21 09:20:06,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 02:20:19] 2024-06-21 09:20:07,859 | INFO     | collected zombie processes
[2024-06-21 02:20:19] 2024-06-21 09:20:07,859 | INFO     | will now attempt to kill all subprocesses of pid=3183243
[2024-06-21 02:20:19] 2024-06-21 09:20:08,039 | INFO     | process IDs to be killed: [3183243] (in reverse order)
[2024-06-21 02:20:19] 2024-06-21 09:20:08,238 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 02:20:19] 2024-06-21 09:20:08,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 02:20:19] 2024-06-21 09:20:08,254 | INFO     | did not find any defunct processes belonging to 3183243
[2024-06-21 02:20:19] 2024-06-21 09:20:08,268 | INFO     | did not find any defunct processes belonging to 3183243
[2024-06-21 02:20:19] 2024-06-21 09:20:08,269 | INFO     | ready for new job
[2024-06-21 02:20:19] 2024-06-21 09:20:08,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 02:20:19] 2024-06-21 09:20:08,271 | INFO     | *************************************
[2024-06-21 02:20:19] 2024-06-21 09:20:08,271 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 02:20:19] 2024-06-21 09:20:08,271 | INFO     | *************************************
[2024-06-21 02:20:19] 2024-06-21 09:20:08,272 | INFO     | 
[2024-06-21 02:20:19] 2024-06-21 09:20:08,279 | INFO     | architecture information:
[2024-06-21 02:20:19] 2024-06-21 09:20:08,280 | INFO     | executing command: cat /etc/os-release
[2024-06-21 02:20:19] 2024-06-21 09:20:08,303 | INFO     | cat /etc/os-release:
[2024-06-21 02:20:19] NAME="CentOS Linux"
[2024-06-21 02:20:19] VERSION="7 (Core)"
[2024-06-21 02:20:19] ID="centos"
[2024-06-21 02:20:19] ID_LIKE="rhel fedora"
[2024-06-21 02:20:19] VERSION_ID="7"
[2024-06-21 02:20:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 02:20:19] ANSI_COLOR="0;31"
[2024-06-21 02:20:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 02:20:19] HOME_URL="https://www.centos.org/"
[2024-06-21 02:20:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 02:20:19] 
[2024-06-21 02:20:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 02:20:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 02:20:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 02:20:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 02:20:19] 
[2024-06-21 02:20:19] 2024-06-21 09:20:08,303 | INFO     | *************************************
[2024-06-21 02:20:19] 2024-06-21 09:20:08,806 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/54
[2024-06-21 02:20:19] 2024-06-21 09:20:08,839 | INFO     | sufficient remaining disk space (401072979968 B)
[2024-06-21 02:20:19] 2024-06-21 09:20:08,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 02:20:19] 2024-06-21 09:20:08,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 02:20:19] 2024-06-21 09:20:08,839 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 02:20:19] 2024-06-21 09:20:08,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:20:19] 2024-06-21 09:20:08,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 02:20:19] 2024-06-21 09:20:08,841 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 02:20:19] 2024-06-21 09:20:08,842 | INFO     | aborting loop
[2024-06-21 02:20:19] 2024-06-21 09:20:08,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 02:20:19] 2024-06-21 09:20:08,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 02:20:19] 2024-06-21 09:20:09,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 02:20:19] 2024-06-21 09:20:09,350 | INFO     | all data control threads have been joined
[2024-06-21 02:20:19] 2024-06-21 09:20:09,844 | INFO     | [job] retrieve thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:09,846 | INFO     | [data] copytool_in thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:09,847 | INFO     | [job] job monitor thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:09,897 | INFO     | all payload control threads have been joined
[2024-06-21 02:20:19] 2024-06-21 09:20:09,995 | INFO     | all job control threads have been joined
[2024-06-21 02:20:19] 2024-06-21 09:20:10,355 | INFO     | [data] control thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:10,624 | INFO     | [payload] validate_post thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:10,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:20:19] 2024-06-21 09:20:10,668 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:10,847 | INFO     | [data] copytool_out thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:10,902 | INFO     | [payload] control thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:10,918 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:11,000 | INFO     | [job] control thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:11,151 | INFO     | [job] validate thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:11,155 | INFO     | [payload] failed_post thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:11,206 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:11,332 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:11,664 | INFO     | [job] queue monitor thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:13,132 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 02:20:19] 2024-06-21 09:20:14,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124625537804096)>', '<ExcThread(monitor, started 124625029695232)>']
[2024-06-21 02:20:19] 2024-06-21 09:20:14,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 02:20:19] 2024-06-21 09:20:14,872 | INFO     | [monitor] control thread has ended
[2024-06-21 02:20:19] 2024-06-21 09:20:19,143 | INFO     | all workflow threads have been joined
[2024-06-21 02:20:19] 2024-06-21 09:20:19,143 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 02:20:19] 2024-06-21 09:20:19,143 | INFO     | traces error code: 0
[2024-06-21 02:20:19] 2024-06-21 09:20:19,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 02:20:19] 2024-06-21 09:20:19,303 [wrapper] ==== pilot stdout END ====
[2024-06-21 02:20:19] 2024-06-21 09:20:19,308 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 02:20:19] 2024-06-21 09:20:19,311 [wrapper] pilotpid: 3175839
[2024-06-21 02:20:19] 2024-06-21 09:20:19,315 [wrapper] Pilot exit status: 0
[2024-06-21 02:20:19] 2024-06-21 09:20:19,340 [wrapper] pandaids: 6239102073
[2024-06-21 02:20:19] 2024-06-21 09:20:19,449 [wrapper] cleanup supervisor_pilot 3525981 3175840
[2024-06-21 02:20:19] 2024-06-21 09:20:19,454 [wrapper] Test setup, not cleaning
[2024-06-21 02:20:19] 2024-06-21 09:20:19,461 [wrapper] ==== wrapper stdout END ====
[2024-06-21 02:20:19] 2024-06-21 09:20:19,465 [wrapper] ==== wrapper stderr END ====
[2024-06-21 02:20:19] 2024-06-21 09:20:19,472 [wrapper] apfmon messages muted
[2024-06-21 02:20:19]  *** Error codes and diagnostics ***
[2024-06-21 02:20:19]     "exeErrorCode": 0,
[2024-06-21 02:20:19]     "exeErrorDiag": "",
[2024-06-21 02:20:19]     "pilotErrorCode": 0,
[2024-06-21 02:20:19]     "pilotErrorDiag": "",
[2024-06-21 02:20:19]  *** Listing of results directory ***
[2024-06-21 02:20:19] total 877608
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc    469766 Jun 20 15:18 pilot3.tar.gz
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc      5654 Jun 20 15:27 queuedata.json
[2024-06-21 02:20:19] -rwx------ 1 boinc boinc     32308 Jun 20 15:28 runpilot2-wrapper.sh
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc       100 Jun 20 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 02:20:19] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 21:11 run_atlas
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc       105 Jun 20 21:11 job.xml
[2024-06-21 02:20:19] -rw-r--r-- 2 boinc boinc 613079374 Jun 20 21:11 EVNT.40024047._000053.pool.root.1
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc      7360 Jun 20 21:11 init_data.xml
[2024-06-21 02:20:19] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:11 start_atlas.sh
[2024-06-21 02:20:19] drwxrwx--x 2 boinc boinc      4096 Jun 20 21:11 shared
[2024-06-21 02:20:19] -rw-r--r-- 2 boinc boinc    482476 Jun 20 21:11 input.tar.gz
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc         0 Jun 20 21:11 boinc_lockfile
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc      2495 Jun 20 21:11 pandaJob.out
[2024-06-21 02:20:19] -rw------- 1 boinc boinc       424 Jun 20 21:11 setup.sh.local
[2024-06-21 02:20:19] -rw------- 1 boinc boinc   1024126 Jun 20 21:11 agis_schedconf.cvmfs.json
[2024-06-21 02:20:19] -rw------- 1 boinc boinc   1321251 Jun 20 21:11 cric_ddmendpoints.json
[2024-06-21 02:20:19] drwx------ 4 boinc boinc      4096 Jun 20 21:11 pilot3
[2024-06-21 02:20:19] -rw------- 1 boinc boinc 277277119 Jun 21 02:19 HITS.40024049._001171.pool.root.1
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc       532 Jun 21 02:19 boinc_task_state.xml
[2024-06-21 02:20:19] -rw------- 1 boinc boinc        95 Jun 21 02:19 pilot_heartbeat.json
[2024-06-21 02:20:19] -rw------- 1 boinc boinc      1020 Jun 21 02:19 memory_monitor_summary.json
[2024-06-21 02:20:19] -rw------- 1 boinc boinc         0 Jun 21 02:19 agis_ddmendpoints.agis.ALL.json
[2024-06-21 02:20:19] -rw------- 1 boinc boinc    382676 Jun 21 02:19 log.40024049._001171.job.log.tgz.1
[2024-06-21 02:20:19] -rw------- 1 boinc boinc      7639 Jun 21 02:20 heartbeat.json
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc      8192 Jun 21 02:20 boinc_mmap_file
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc        28 Jun 21 02:20 wrapper_checkpoint.txt
[2024-06-21 02:20:19] -rw------- 1 boinc boinc      4343 Jun 21 02:20 pilotlog.txt
[2024-06-21 02:20:19] -rw------- 1 boinc boinc   2004840 Jun 21 02:20 log.40024049._001171.job.log.1
[2024-06-21 02:20:19] -rw------- 1 boinc boinc       357 Jun 21 02:20 output.list
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc       620 Jun 21 02:20 runtime_log
[2024-06-21 02:20:19] -rw------- 1 boinc boinc   2406400 Jun 21 02:20 result.tar.gz
[2024-06-21 02:20:19] -rw------- 1 boinc boinc       649 Jun 21 02:20 zFuLDmuRfe5n7Olcko1bjSoqABFKDmABFKDmOtvXDma6qKDmJG7BFn.diag
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc     11153 Jun 21 02:20 runtime_log.err
[2024-06-21 02:20:19] -rw-r--r-- 1 boinc boinc     21650 Jun 21 02:20 stderr.txt
[2024-06-21 02:20:19] HITS file was successfully produced:
[2024-06-21 02:20:19] -rw------- 1 boinc boinc 277277119 Jun 21 02:19 shared/HITS.pool.root.1
[2024-06-21 02:20:19]  *** Contents of shared directory: ***
[2024-06-21 02:20:19] total 872344
[2024-06-21 02:20:19] -rw-r--r-- 2 boinc boinc 613079374 Jun 20 21:11 ATLAS.root_0
[2024-06-21 02:20:19] -rw-r--r-- 2 boinc boinc     17537 Jun 20 21:11 start_atlas.sh
[2024-06-21 02:20:19] -rw-r--r-- 2 boinc boinc    482476 Jun 20 21:11 input.tar.gz
[2024-06-21 02:20:19] -rw------- 1 boinc boinc 277277119 Jun 21 02:19 HITS.pool.root.1
[2024-06-21 02:20:19] -rw------- 1 boinc boinc   2406400 Jun 21 02:20 result.tar.gz
02:20:20 (3170987): run_atlas exited; CPU time 52485.208074
02:20:20 (3170987): called boinc_finish(0)

</stderr_txt>
]]>

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