Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 04:10:59 (31108): Detected: vboxwrapper 26206
2024-06-21 04:10:59 (31108): Detected: BOINC client v7.16.11
2024-06-21 04:11:00 (31108): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2024-06-21 04:11:00 (31108): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 04:11:01 (31108): Create VM. (boinc_47b8e68f14bf6f34, slot#0)
2024-06-21 04:11:01 (31108): Setting Memory Size for VM. (4700MB)
2024-06-21 04:11:02 (31108): Setting CPU Count for VM. (7)
2024-06-21 04:11:02 (31108): Setting Chipset Options for VM.
2024-06-21 04:11:02 (31108): Setting Graphics Controller Options for VM.
2024-06-21 04:11:03 (31108): Setting Boot Options for VM.
2024-06-21 04:11:03 (31108): Setting Network Configuration for NAT.
2024-06-21 04:11:03 (31108): Enabling VM Network Access.
2024-06-21 04:11:03 (31108): Disabling USB Support for VM.
2024-06-21 04:11:04 (31108): Disabling COM Port Support for VM.
2024-06-21 04:11:04 (31108): Disabling LPT Port Support for VM.
2024-06-21 04:11:04 (31108): Disabling Audio Support for VM.
2024-06-21 04:11:04 (31108): Disabling Clipboard Support for VM.
2024-06-21 04:11:05 (31108): Disabling Drag and Drop Support for VM.
2024-06-21 04:11:05 (31108): Adding storage controller(s) to VM.
2024-06-21 04:11:05 (31108): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 04:11:06 (31108): Adding VirtualBox Guest Additions to VM.
2024-06-21 04:11:07 (31108): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 04:11:07 (31108): forwarding host port 53981 to guest port 80
2024-06-21 04:11:07 (31108): Enabling remote desktop for VM.
2024-06-21 04:11:07 (31108): Required extension pack not installed, remote desktop not enabled.
2024-06-21 04:11:07 (31108): Enabling shared directory for VM.
2024-06-21 04:11:08 (31108): Starting VM using VBoxManage interface. (boinc_47b8e68f14bf6f34, slot#0)
2024-06-21 04:11:12 (31108): Successfully started VM. (PID = '19388')
2024-06-21 04:11:12 (31108): Reporting VM Process ID to BOINC.
2024-06-21 04:11:12 (31108): Guest Log: BIOS: VirtualBox 6.1.12
2024-06-21 04:11:12 (31108): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 04:11:12 (31108): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 04:11:12 (31108): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 04:11:12 (31108): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 04:11:12 (31108): Detected: Web Application Enabled (http://localhost:53981)
2024-06-21 04:11:12 (31108): Preference change detected
2024-06-21 04:11:12 (31108): Setting CPU throttle for VM. (40%)
2024-06-21 04:11:12 (31108): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 04:11:14 (31108): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 04:11:14 (31108): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 04:11:17 (31108): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 04:11:17 (31108): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 04:11:17 (31108): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 04:11:26 (31108): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 04:11:26 (31108): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 04:11:36 (31108): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000135 main     Log opened 2024-06-21T04:11:34.858698000Z
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000221 main     OS Product: Linux
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000254 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000291 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000328 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000329 main     Process ID: 1349
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.000330 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 04:11:36 (31108): Guest Log: 00:00:00.002549 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 04:11:36 (31108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 04:11:36 (31108): Guest Log: [INFO] Mounting shared directory
2024-06-21 04:11:36 (31108): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 04:11:41 (31108): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 04:11:41 (31108): Guest Log: [INFO] Detected branch: prod
2024-06-21 04:11:42 (31108): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 04:11:42 (31108): Guest Log: Copying input files
2024-06-21 04:11:46 (31108): Guest Log: 00:00:10.004905 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 023 032 000ns (GuestNow=1 718 939 505 840 206 000 ns GuestLast=1 718 943 094 863 238 000 ns fSetTimeLastLoop=true )
2024-06-21 04:11:49 (31108): Guest Log: Copied input files into RunAtlas.
2024-06-21 04:11:50 (31108): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 04:11:50 (31108): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 04:11:50 (31108): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 04:11:50 (31108): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 04:13:09 (31108): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 04:13:09 (31108): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 04:13:09 (31108): Guest Log: 2.6.3.0 1625 1 32152 134110 3 1 3117205 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-21 04:13:11 (31108): Guest Log: copied the webapp to /var/www
2024-06-21 04:13:11 (31108): Guest Log: ATHENA_PROC_NUMBER=7
2024-06-21 04:13:11 (31108): Guest Log: ATHENA_CORE_NUMBER=7
2024-06-21 04:13:11 (31108): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 04:13:11 (31108): Guest Log:  *** Starting ATLAS job. (PandaID=6239051987 taskID=40024031) ***
2024-06-21 04:21:36 (31108): Guest Log:  *** Job finished ***
2024-06-21 04:21:36 (31108): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:22,453 | INFO     | [payload] execute_payloads thread has finished
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:22,635 | INFO     | [job] create_data_payload thread has finished
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:25,735 | INFO     | [data] queue_monitor thread has finished
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:27,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264009062208)>', '<ExcThread(monitor, started 140263339050752)>']
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:27,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:27,650 | INFO     | [monitor] control thread has ended
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,031 | INFO     | all workflow threads have been joined
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,032 | INFO     | end of generic workflow (traces error code: 0)
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,032 | INFO     | traces error code: 0
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,153 [wrapper] ==== pilot stdout END ====
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,158 [wrapper] ==== wrapper stdout RESUME ====
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,162 [wrapper] pilotpid: 6584
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,166 [wrapper] Pilot exit status: 0
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,235 [wrapper] pandaids: 6239051987
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,267 [wrapper] cleanup supervisor_pilot  6589 6585
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,272 [wrapper] Test setup, not cleaning
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,276 [wrapper] ==== wrapper stdout END ====
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,281 [wrapper] ==== wrapper stderr END ====
2024-06-21 04:21:36 (31108): Guest Log: 2024-06-21 03:21:32,291 [wrapper] apfmon messages muted
2024-06-21 04:21:36 (31108): Guest Log:  *** Error codes and diagnostics ***
2024-06-21 04:21:36 (31108): Guest Log:     "exeErrorCode": 65,
2024-06-21 04:21:36 (31108): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2024-06-21 04:21:36 (31108): Guest Log:     "pilotErrorCode": 1305,
2024-06-21 04:21:36 (31108): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-21 03:18:59,693 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2024-06-21 04:21:36 (31108): Guest Log:  *** Listing of results directory ***
2024-06-21 04:21:36 (31108): Guest Log: total 3592
2024-06-21 04:21:36 (31108): Guest Log: -rw-r--r--. 1 atlas atlas  469766 Jun 20 20:28 pilot3.tar.gz
2024-06-21 04:21:36 (31108): Guest Log: -rw-r--r--. 1 atlas atlas    5654 Jun 20 20:32 queuedata.json
2024-06-21 04:21:36 (31108): Guest Log: -rwx------. 1 atlas atlas   32308 Jun 20 20:33 runpilot2-wrapper.sh
2024-06-21 04:21:36 (31108): Guest Log: -rwxr-xr-x. 1 atlas atlas   12633 Jun 21 03:11 init_data.xml
2024-06-21 04:21:36 (31108): Guest Log: -rwxr-xr-x. 1 atlas atlas  482527 Jun 21 03:11 input.tar.gz
2024-06-21 04:21:36 (31108): Guest Log: -rwxr-xr-x. 1 atlas atlas   17537 Jun 21 03:11 start_atlas.sh
2024-06-21 04:21:36 (31108): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun 21 03:11 EVNT.40024029._000036.pool.root.1 -> /data/./ATLAS.root_0
2024-06-21 04:21:36 (31108): Guest Log: -rw-r--r--. 1 atlas atlas    2570 Jun 21 03:13 pandaJob.out
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas     424 Jun 21 03:13 setup.sh.local
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas 1024126 Jun 21 03:16 agis_schedconf.cvmfs.json
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas       0 Jun 21 03:16 agis_ddmendpoints.agis.ALL.json
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas 1321251 Jun 21 03:16 cric_ddmendpoints.json
2024-06-21 04:21:36 (31108): Guest Log: drwx------. 4 atlas atlas    4096 Jun 21 03:16 pilot3
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas     952 Jun 21 03:19 memory_monitor_summary.json
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas   20602 Jun 21 03:19 log.40024031._000634.job.log.tgz.1
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas      95 Jun 21 03:21 pilot_heartbeat.json
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas    8392 Jun 21 03:21 heartbeat.json
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas    4457 Jun 21 03:21 pilotlog.txt
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas   79653 Jun 21 03:21 log.40024031._000634.job.log.1
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas     188 Jun 21 03:21 output.list
2024-06-21 04:21:36 (31108): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jun 21 03:21 runtime_log
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas  122880 Jun 21 03:21 result.tar.gz
2024-06-21 04:21:36 (31108): Guest Log: -rw-r--r--. 1 atlas atlas   10759 Jun 21 03:21 runtime_log.err
2024-06-21 04:21:36 (31108): Guest Log: -rw-------. 1 atlas atlas     625 Jun 21 03:21 AMmNDmgede5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmUcXKDmjP09wm.diag
2024-06-21 04:21:36 (31108): Guest Log: Looking for outputfile HITS.40024031._000634.pool.root.1
2024-06-21 04:21:36 (31108): Guest Log: No HITS file was produced
2024-06-21 04:21:36 (31108): Guest Log: Successfully finished the ATLAS job!
2024-06-21 04:21:36 (31108): Guest Log: Copying the results back to the shared directory!
2024-06-21 04:21:36 (31108): Guest Log:  *** Contents of shared directory: ***
2024-06-21 04:21:36 (31108): Guest Log: total 580972
2024-06-21 04:21:36 (31108): Guest Log: -rwxrwxrwx. 1 root root 594268695 Jun 21 03:10 ATLAS.root_0
2024-06-21 04:21:36 (31108): Guest Log: -rwxrwxrwx. 1 root root     12633 Jun 21 03:10 init_data.xml
2024-06-21 04:21:36 (31108): Guest Log: -rwxrwxrwx. 1 root root    482527 Jun 21 02:34 input.tar.gz
2024-06-21 04:21:36 (31108): Guest Log: -rwxrwxrwx. 1 root root    122880 Jun 21 03:21 result.tar.gz
2024-06-21 04:21:36 (31108): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 21 02:34 start_atlas.sh
2024-06-21 04:21:36 (31108): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-21 04:21:36 (31108): VM Completion File Detected.
2024-06-21 04:21:36 (31108): Powering off VM.
2024-06-21 04:21:37 (31108): Successfully stopped VM.
2024-06-21 04:21:37 (31108): Deregistering VM. (boinc_47b8e68f14bf6f34, slot#0)
2024-06-21 04:21:37 (31108): Removing network bandwidth throttle group from VM.
2024-06-21 04:21:37 (31108): Removing VM from VirtualBox.
04:21:43 (31108): called boinc_finish(0)

</stderr_txt>
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