Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:25:04 (210912): wrapper (7.7.26015): starting
22:25:04 (210912): wrapper: running run_atlas (--nthreads 12)
[2024-06-20 22:25:04] Arguments: --nthreads 12
[2024-06-20 22:25:04] Threads: 12
[2024-06-20 22:25:04] Checking for CVMFS
[2024-06-20 22:25:04] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 22:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 22:25:05] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 22:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 22:25:05] 2.10.1.0 6782 233453 197940 134114 1 55 32644297 45568001 0 130560 0 1240721632 99.768 747934439 17509 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-20 22:25:05] CVMFS is ok
[2024-06-20 22:25:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 22:25:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 22:25:05] Further information can be found at the LHC@home message board.
[2024-06-20 22:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 22:25:05] Checking for apptainer binary...
[2024-06-20 22:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 22:25:05] Running /usr/bin/apptainer --version
[2024-06-20 22:25:05] apptainer version 1.3.2-1.el7
[2024-06-20 22:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 22:25:05] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0128.triumf.lcg
[2024-06-20 22:25:05] apptainer works
[2024-06-20 22:25:06] Set ATHENA_PROC_NUMBER=12
[2024-06-20 22:25:06] Set ATHENA_CORE_NUMBER=12
[2024-06-20 22:25:06] Starting ATLAS job with PandaID=6239015386
[2024-06-20 22:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 23:52:36]  *** The last 200 lines of the pilot log: ***
[2024-06-20 23:52:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-20 23:52:36]  is_tar=False
[2024-06-20 23:52:36]  lfn=log.40024014._000328.job.log.tgz.1
[2024-06-20 23:52:36]  mtime=0
[2024-06-20 23:52:36]  protocol_id=None
[2024-06-20 23:52:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-20 23:52:36]  replicas=None
[2024-06-20 23:52:36]  scope=mc23_13p6TeV
[2024-06-20 23:52:36]  status=None
[2024-06-20 23:52:36]  status_code=0
[2024-06-20 23:52:36]  storage_token=
[2024-06-20 23:52:36]  surl=/home/boinc/slots/0/PanDA_Pilot-6239015386/log.40024014._000328.job.log.tgz.1
[2024-06-20 23:52:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/4b/log.40024014._000328.job.log.tgz.1
[2024-06-20 23:52:36]  workdir=None
[2024-06-20 23:52:36] ]
[2024-06-20 23:52:36] 2024-06-21 06:52:09,408 | INFO     | transferring file log.40024014._000328.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6239015386/log.40024014._000328.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-20 23:52:36] 2024-06-21 06:52:09,408 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6239015386/log.40024014._000328.job.log.tgz.1 /home/boinc/slots/0/log.40024014._000328.job.log.t
[2024-06-20 23:52:36] 2024-06-21 06:52:09,435 | INFO     | adding to output.list: log.40024014._000328.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/4b/log.40024014._000328.job.log.tg
[2024-06-20 23:52:36] 2024-06-21 06:52:09,436 | INFO     | summary of transferred files:
[2024-06-20 23:52:36] 2024-06-21 06:52:09,436 | INFO     |  -- lfn=log.40024014._000328.job.log.tgz.1, status_code=0, status=transferred
[2024-06-20 23:52:36] 2024-06-21 06:52:09,436 | INFO     | stage-out finished correctly
[2024-06-20 23:52:36] 2024-06-21 06:52:11,315 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-20 23:52:36] 2024-06-21 06:52:12,794 | INFO     | job 6239015386 has state=finished
[2024-06-20 23:52:36] 2024-06-21 06:52:12,794 | INFO     | preparing for final server update for job 6239015386 in state='finished'
[2024-06-20 23:52:36] 2024-06-21 06:52:12,995 | WARNING  | process 221467 is no longer using CPU - aborting
[2024-06-20 23:52:36] 2024-06-21 06:52:13,522 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-06-20 23:52:36] 2024-06-21 06:52:13,522 | INFO     | this job has now completed (state=finished)
[2024-06-20 23:52:36] 2024-06-21 06:52:13,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-20 23:52:36] 2024-06-21 06:52:13,523 | INFO     | job 6239015386 has finished - writing final server update
[2024-06-20 23:52:36] 2024-06-21 06:52:13,523 | INFO     | total number of processed events: 400 (read)
[2024-06-20 23:52:36] 2024-06-21 06:52:13,530 | INFO     | executing command: lscpu
[2024-06-20 23:52:36] 2024-06-21 06:52:13,595 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-20 23:52:36] 2024-06-21 06:52:13,596 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-20 23:52:36] 2024-06-21 06:52:13,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-20 23:52:36] 2024-06-21 06:52:15,500 | INFO     | monitor loop #409: job 0:6239015386 is in state 'finished'
[2024-06-20 23:52:36] 2024-06-21 06:52:15,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 23:52:36] 2024-06-21 06:52:18,003 | INFO     | monitor loop #410: job 0:6239015386 is in state 'finished'
[2024-06-20 23:52:36] 2024-06-21 06:52:18,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 23:52:36] 2024-06-21 06:52:20,510 | INFO     | monitor loop #411: job 0:6239015386 is in state 'finished'
[2024-06-20 23:52:36] 2024-06-21 06:52:20,510 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-20 23:52:36] 2024-06-21 06:52:22,542 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-20 23:52:36] 2024-06-21 06:52:22,542 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6239015386/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 23:52:36] 2024-06-21 06:52:22,544 | INFO     | extracted standard info from prmon json
[2024-06-20 23:52:36] 2024-06-21 06:52:22,544 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 23:52:36] 2024-06-21 06:52:22,544 | WARNING  | GPU info not found in prmon json
[2024-06-20 23:52:36] 2024-06-21 06:52:22,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 23:52:36] 2024-06-21 06:52:22,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 23:52:36] 2024-06-21 06:52:22,548 | INFO     | fitting pss+swap vs Time
[2024-06-20 23:52:36] 2024-06-21 06:52:22,548 | INFO     | model: linear, x: [1718947852.0, 1718947913.0, 1718947974.0, 1718948035.0, 1718948096.0, 1718948157.0, 1718948218.0, 1718948279.0, 1718948340.0, 1718948401.0, 1718
[2024-06-20 23:52:36] 2024-06-21 06:52:22,548 | INFO     | sum of square deviations: 147126479.5
[2024-06-20 23:52:36] 2024-06-21 06:52:22,549 | INFO     | sum of deviations: 21939820071.499996
[2024-06-20 23:52:36] 2024-06-21 06:52:22,549 | INFO     | mean x: 1718950200.5
[2024-06-20 23:52:36] 2024-06-21 06:52:22,549 | INFO     | mean y: 2672248.9615384615
[2024-06-20 23:52:36] 2024-06-21 06:52:22,549 | INFO     | -- intersect: -256330913921.28894
[2024-06-20 23:52:36] 2024-06-21 06:52:22,549 | INFO     | intersect: -256330913921.28894
[2024-06-20 23:52:36] 2024-06-21 06:52:22,549 | INFO     | chi2: 2.4985567874458203
[2024-06-20 23:52:36] 2024-06-21 06:52:22,550 | INFO     | -- intersect: -256330913921.28894
[2024-06-20 23:52:36] 2024-06-21 06:52:22,550 | INFO     | current memory leak: 149.12 B/s (using 78 data points, chi2=2.50)
[2024-06-20 23:52:36] 2024-06-21 06:52:22,550 | INFO     | ..............................
[2024-06-20 23:52:36] 2024-06-21 06:52:22,550 | INFO     | . Timing measurements:
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . get job = 0 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . initial setup = 2 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . payload setup = 7 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . stage-in = 0 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . payload execution = 5181 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . stage-out = 0 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | . log creation = 0 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,551 | INFO     | ..............................
[2024-06-20 23:52:36] 2024-06-21 06:52:22,642 | INFO     | 
[2024-06-20 23:52:36] 2024-06-21 06:52:22,642 | INFO     | job summary report
[2024-06-20 23:52:36] 2024-06-21 06:52:22,642 | INFO     | --------------------------------------------------
[2024-06-20 23:52:36] 2024-06-21 06:52:22,642 | INFO     | PanDA job id: 6239015386
[2024-06-20 23:52:36] 2024-06-21 06:52:22,642 | INFO     | task id: 40024014
[2024-06-20 23:52:36] 2024-06-21 06:52:22,642 | INFO     | errors: (none)
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | pilot state: finished 
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | transexitcode: 0
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | exeerrorcode: 0
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | exeerrordiag: 
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | exitcode: 0
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | exitmsg: OK
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | cpuconsumptiontime: 48362 s
[2024-06-20 23:52:36] 2024-06-21 06:52:22,643 | INFO     | nevents: 400
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | neventsw: 0
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | pid: 221467
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | pgrp: 221467
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | corecount: 12
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | event service: False
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | sizes: {0: 2385314, 1: 2386847, 6: 2387053, 12: 2387081, 5192: 2413528, 5193: 2422482, 5195: 2422666, 5207: 2422836}
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | --------------------------------------------------
[2024-06-20 23:52:36] 2024-06-21 06:52:22,644 | INFO     | 
[2024-06-20 23:52:36] 2024-06-21 06:52:22,645 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-20 23:52:36] 2024-06-21 06:52:22,676 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,676 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,676 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,676 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 23:52:36] 2024-06-21 06:52:22,678 | INFO     | job 6239015386 has completed (purged errors)
[2024-06-20 23:52:36] 2024-06-21 06:52:22,679 | INFO     | overall cleanup function is called
[2024-06-20 23:52:36] 2024-06-21 06:52:23,687 | INFO     | --- collectZombieJob: --- 10, [221467]
[2024-06-20 23:52:36] 2024-06-21 06:52:23,688 | INFO     | zombie collector waiting for pid 221467
[2024-06-20 23:52:36] 2024-06-21 06:52:23,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 23:52:36] 2024-06-21 06:52:24,694 | INFO     | collected zombie processes
[2024-06-20 23:52:36] 2024-06-21 06:52:24,694 | INFO     | will now attempt to kill all subprocesses of pid=221467
[2024-06-20 23:52:36] 2024-06-21 06:52:24,786 | INFO     | process IDs to be killed: [221467] (in reverse order)
[2024-06-20 23:52:36] 2024-06-21 06:52:24,867 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 23:52:36] 2024-06-21 06:52:24,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 23:52:36] 2024-06-21 06:52:24,873 | INFO     | did not find any defunct processes belonging to 221467
[2024-06-20 23:52:36] 2024-06-21 06:52:24,879 | INFO     | did not find any defunct processes belonging to 221467
[2024-06-20 23:52:36] 2024-06-21 06:52:24,879 | INFO     | ready for new job
[2024-06-20 23:52:36] 2024-06-21 06:52:24,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 23:52:36] 2024-06-21 06:52:24,881 | INFO     | *************************************
[2024-06-20 23:52:36] 2024-06-21 06:52:24,882 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 23:52:36] 2024-06-21 06:52:24,882 | INFO     | *************************************
[2024-06-20 23:52:36] 2024-06-21 06:52:24,882 | INFO     | 
[2024-06-20 23:52:36] 2024-06-21 06:52:24,887 | INFO     | architecture information:
[2024-06-20 23:52:36] 2024-06-21 06:52:24,887 | INFO     | executing command: cat /etc/os-release
[2024-06-20 23:52:36] 2024-06-21 06:52:24,909 | INFO     | cat /etc/os-release:
[2024-06-20 23:52:36] NAME="CentOS Linux"
[2024-06-20 23:52:36] VERSION="7 (Core)"
[2024-06-20 23:52:36] ID="centos"
[2024-06-20 23:52:36] ID_LIKE="rhel fedora"
[2024-06-20 23:52:36] VERSION_ID="7"
[2024-06-20 23:52:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 23:52:36] ANSI_COLOR="0;31"
[2024-06-20 23:52:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 23:52:36] HOME_URL="https://www.centos.org/"
[2024-06-20 23:52:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 23:52:36] 
[2024-06-20 23:52:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 23:52:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 23:52:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 23:52:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 23:52:36] 
[2024-06-20 23:52:36] 2024-06-21 06:52:24,910 | INFO     | *************************************
[2024-06-20 23:52:36] 2024-06-21 06:52:25,413 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-20 23:52:36] 2024-06-21 06:52:25,439 | INFO     | sufficient remaining disk space (2247609024512 B)
[2024-06-20 23:52:36] 2024-06-21 06:52:25,439 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 23:52:36] 2024-06-21 06:52:25,440 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 23:52:36] 2024-06-21 06:52:25,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 23:52:36] 2024-06-21 06:52:25,525 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-20 23:52:36] 2024-06-21 06:52:25,526 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-20 23:52:36] 2024-06-21 06:52:25,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:52:36] 2024-06-21 06:52:25,526 | INFO     | will abort loop
[2024-06-20 23:52:36] 2024-06-21 06:52:26,231 | INFO     | all data control threads have been joined
[2024-06-20 23:52:36] 2024-06-21 06:52:26,240 | INFO     | all job control threads have been joined
[2024-06-20 23:52:36] 2024-06-21 06:52:26,316 | INFO     | all payload control threads have been joined
[2024-06-20 23:52:36] 2024-06-21 06:52:26,375 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 23:52:36] 2024-06-21 06:52:26,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 23:52:36] 2024-06-21 06:52:26,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 23:52:36] 2024-06-21 06:52:26,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 23:52:36] 2024-06-21 06:52:26,446 | INFO     | [job] retrieve thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:26,534 | INFO     | [job] job monitor thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:26,925 | INFO     | [payload] validate_post thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,098 | INFO     | [payload] failed_post thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,238 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,239 | INFO     | [data] control thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,248 | INFO     | [job] control thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,321 | INFO     | [payload] control thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,446 | INFO     | [data] copytool_out thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,581 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,651 | INFO     | [job] validate thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 23:52:36] 2024-06-21 06:52:27,664 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,683 | INFO     | [data] copytool_in thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:27,735 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:28,667 | INFO     | [job] queue monitor thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:30,445 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 23:52:36] 2024-06-21 06:52:30,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533699426112)>', '<ExcThread(monitor, started 140533259294464)>']
[2024-06-20 23:52:36] 2024-06-21 06:52:31,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 23:52:36] 2024-06-21 06:52:31,409 | INFO     | [monitor] control thread has ended
[2024-06-20 23:52:36] 2024-06-21 06:52:35,577 | INFO     | all workflow threads have been joined
[2024-06-20 23:52:36] 2024-06-21 06:52:35,577 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 23:52:36] 2024-06-21 06:52:35,578 | INFO     | traces error code: 0
[2024-06-20 23:52:36] 2024-06-21 06:52:35,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 23:52:36] 2024-06-21 06:52:35,685 [wrapper] ==== pilot stdout END ====
[2024-06-20 23:52:36] 2024-06-21 06:52:35,690 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 23:52:36] 2024-06-21 06:52:35,694 [wrapper] pilotpid: 215078
[2024-06-20 23:52:36] 2024-06-21 06:52:35,697 [wrapper] Pilot exit status: 0
[2024-06-20 23:52:36] 2024-06-21 06:52:35,711 [wrapper] pandaids: 6239015386
[2024-06-20 23:52:36] 2024-06-21 06:52:35,766 [wrapper] cleanup supervisor_pilot 237388 215079
[2024-06-20 23:52:36] 2024-06-21 06:52:35,770 [wrapper] Test setup, not cleaning
[2024-06-20 23:52:36] 2024-06-21 06:52:35,774 [wrapper] ==== wrapper stdout END ====
[2024-06-20 23:52:36] 2024-06-21 06:52:35,778 [wrapper] ==== wrapper stderr END ====
[2024-06-20 23:52:36] 2024-06-21 06:52:35,785 [wrapper] apfmon messages muted
[2024-06-20 23:52:36]  *** Error codes and diagnostics ***
[2024-06-20 23:52:36]     "exeErrorCode": 0,
[2024-06-20 23:52:36]     "exeErrorDiag": "",
[2024-06-20 23:52:36]     "pilotErrorCode": 0,
[2024-06-20 23:52:36]     "pilotErrorDiag": "",
[2024-06-20 23:52:36]  *** Listing of results directory ***
[2024-06-20 23:52:36] total 833776
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc    469766 Jun 20 12:12 pilot3.tar.gz
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc      5654 Jun 20 12:12 queuedata.json
[2024-06-20 23:52:36] -rwx------ 1 boinc boinc     32308 Jun 20 12:16 runpilot2-wrapper.sh
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc       100 Jun 20 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 23:52:36] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 22:25 run_atlas
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc       105 Jun 20 22:25 job.xml
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc      6610 Jun 20 22:25 init_data.xml
[2024-06-20 23:52:36] -rw-r--r-- 2 boinc boinc 593085420 Jun 20 22:25 EVNT.40024012._000018.pool.root.1
[2024-06-20 23:52:36] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:25 start_atlas.sh
[2024-06-20 23:52:36] drwxrwx--x 2 boinc boinc      4096 Jun 20 22:25 shared
[2024-06-20 23:52:36] -rw-r--r-- 2 boinc boinc    482475 Jun 20 22:25 input.tar.gz
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc         0 Jun 20 22:25 boinc_lockfile
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc      2508 Jun 20 22:25 pandaJob.out
[2024-06-20 23:52:36] -rw------- 1 boinc boinc       424 Jun 20 22:25 setup.sh.local
[2024-06-20 23:52:36] -rw------- 1 boinc boinc   1024115 Jun 20 22:25 agis_schedconf.cvmfs.json
[2024-06-20 23:52:36] -rw------- 1 boinc boinc         0 Jun 20 22:25 agis_ddmendpoints.agis.ALL.json
[2024-06-20 23:52:36] -rw------- 1 boinc boinc   1321251 Jun 20 22:25 cric_ddmendpoints.json
[2024-06-20 23:52:36] drwx------ 4 boinc boinc      4096 Jun 20 22:25 pilot3
[2024-06-20 23:52:36] -rw------- 1 boinc boinc 255482856 Jun 20 23:51 HITS.40024014._000328.pool.root.1
[2024-06-20 23:52:36] -rw------- 1 boinc boinc        95 Jun 20 23:51 pilot_heartbeat.json
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc       530 Jun 20 23:51 boinc_task_state.xml
[2024-06-20 23:52:36] -rw------- 1 boinc boinc      1045 Jun 20 23:52 memory_monitor_summary.json
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc        27 Jun 20 23:52 wrapper_checkpoint.txt
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc      8192 Jun 20 23:52 boinc_mmap_file
[2024-06-20 23:52:36] -rw------- 1 boinc boinc    355154 Jun 20 23:52 log.40024014._000328.job.log.tgz.1
[2024-06-20 23:52:36] -rw------- 1 boinc boinc      7754 Jun 20 23:52 heartbeat.json
[2024-06-20 23:52:36] -rw------- 1 boinc boinc      4396 Jun 20 23:52 pilotlog.txt
[2024-06-20 23:52:36] -rw------- 1 boinc boinc    483959 Jun 20 23:52 log.40024014._000328.job.log.1
[2024-06-20 23:52:36] -rw------- 1 boinc boinc       357 Jun 20 23:52 output.list
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc       620 Jun 20 23:52 runtime_log
[2024-06-20 23:52:36] -rw------- 1 boinc boinc    860160 Jun 20 23:52 result.tar.gz
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc     11130 Jun 20 23:52 runtime_log.err
[2024-06-20 23:52:36] -rw------- 1 boinc boinc       652 Jun 20 23:52 Ac0KDmbRce5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmaplKDmb7n2sm.diag
[2024-06-20 23:52:36] -rw-r--r-- 1 boinc boinc     21684 Jun 20 23:52 stderr.txt
[2024-06-20 23:52:36] HITS file was successfully produced:
[2024-06-20 23:52:36] -rw------- 1 boinc boinc 255482856 Jun 20 23:51 shared/HITS.pool.root.1
[2024-06-20 23:52:36]  *** Contents of shared directory: ***
[2024-06-20 23:52:36] total 830024
[2024-06-20 23:52:36] -rw-r--r-- 2 boinc boinc 593085420 Jun 20 22:25 ATLAS.root_0
[2024-06-20 23:52:36] -rw-r--r-- 2 boinc boinc     17537 Jun 20 22:25 start_atlas.sh
[2024-06-20 23:52:36] -rw-r--r-- 2 boinc boinc    482475 Jun 20 22:25 input.tar.gz
[2024-06-20 23:52:36] -rw------- 1 boinc boinc 255482856 Jun 20 23:51 HITS.pool.root.1
[2024-06-20 23:52:36] -rw------- 1 boinc boinc    860160 Jun 20 23:52 result.tar.gz
23:52:38 (210912): run_atlas exited; CPU time 48029.078376
23:52:38 (210912): called boinc_finish(0)

</stderr_txt>
]]>

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