Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:24:36 (2930480): wrapper (7.7.26015): starting
05:24:36 (2930480): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 05:24:36] Arguments: --nthreads 4
[2024-06-22 05:24:36] Threads: 4
[2024-06-22 05:24:36] Checking for CVMFS
[2024-06-22 05:24:36] No cvmfs_config command found, will try listing directly
[2024-06-22 05:24:36] CVMFS is ok
[2024-06-22 05:24:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 05:24:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 05:24:36] Further information can be found at the LHC@home message board.
[2024-06-22 05:24:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 05:24:36] Checking for apptainer binary...
[2024-06-22 05:24:36] which: no apptainer in ((null))
[2024-06-22 05:24:36] apptainer is not installed, using version from CVMFS
[2024-06-22 05:24:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 05:24:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-22 05:24:37] apptainer works
[2024-06-22 05:24:37] Set ATHENA_PROC_NUMBER=4
[2024-06-22 05:24:37] Set ATHENA_CORE_NUMBER=4
[2024-06-22 05:24:37] Starting ATLAS job with PandaID=6239015199
[2024-06-22 05:24:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 09:34:31]  *** The last 200 lines of the pilot log: ***
[2024-06-22 09:34:31] 2024-06-22 07:34:17,663 | INFO     | intersect: -42143945524.68018
[2024-06-22 09:34:31] 2024-06-22 07:34:17,663 | INFO     | chi2: 4.201460760205897
[2024-06-22 09:34:31] 2024-06-22 07:34:17,664 | INFO     | model: linear, x: [1719026724.0, 1719026785.0, 1719026846.0, 1719026907.0, 1719026968.0, 1719027029.0, 1719027090.0, 1719027151.0, 1719027212.0, 1719027273.0, 1719
[2024-06-22 09:34:31] 2024-06-22 07:34:17,664 | INFO     | sum of square deviations: 4286517580.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,665 | INFO     | sum of deviations: 109279355941.5
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | mean x: 1719034013.5
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | mean y: 2298753.5208333335
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | -- intersect: -43822303929.38985
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | intersect: -43822303929.38985
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | chi2: 4.202409366016624
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | current chi2=4.202409366016624 (change=-0.022578000006850004 %)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,666 | INFO     | right removable region: 239
[2024-06-22 09:34:31] 2024-06-22 07:34:17,667 | INFO     | model: linear, x: [1719027029.0, 1719027090.0, 1719027151.0, 1719027212.0, 1719027273.0, 1719027334.0, 1719027395.0, 1719027456.0, 1719027517.0, 1719027578.0, 1719
[2024-06-22 09:34:31] 2024-06-22 07:34:17,667 | INFO     | sum of square deviations: 4286517580.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,669 | INFO     | sum of deviations: 53585768328.500015
[2024-06-22 09:34:31] 2024-06-22 07:34:17,669 | INFO     | mean x: 1719034318.5
[2024-06-22 09:34:31] 2024-06-22 07:34:17,669 | INFO     | mean y: 2332543.1791666667
[2024-06-22 09:34:31] 2024-06-22 07:34:17,669 | INFO     | -- intersect: -21487320309.21434
[2024-06-22 09:34:31] 2024-06-22 07:34:17,669 | INFO     | intersect: -21487320309.21434
[2024-06-22 09:34:31] 2024-06-22 07:34:17,669 | INFO     | chi2: 1.6222280807896299
[2024-06-22 09:34:31] 2024-06-22 07:34:17,670 | INFO     | current chi2=1.6222280807896299 (change=61.38895081076205 %)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,670 | INFO     | model: linear, x: [1719027334.0, 1719027395.0, 1719027456.0, 1719027517.0, 1719027578.0, 1719027639.0, 1719027700.0, 1719027761.0, 1719027822.0, 1719027883.0, 1719
[2024-06-22 09:34:31] 2024-06-22 07:34:17,670 | INFO     | sum of square deviations: 4024149870.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | sum of deviations: 6284912594.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | mean x: 1719034471.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | mean y: 2360038.519148936
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | -- intersect: -2682426002.0932074
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | intersect: -2682426002.0932074
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | chi2: 0.058710693845071646
[2024-06-22 09:34:31] 2024-06-22 07:34:17,672 | INFO     | current chi2=0.058710693845071646 (change=96.38086071001226 %)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,673 | INFO     | model: linear, x: [1719027639.0, 1719027700.0, 1719027761.0, 1719027822.0, 1719027883.0, 1719027944.0, 1719028005.0, 1719028066.0, 1719028127.0, 1719028188.0, 1719
[2024-06-22 09:34:31] 2024-06-22 07:34:17,673 | INFO     | sum of square deviations: 3772712597.5
[2024-06-22 09:34:31] 2024-06-22 07:34:17,674 | INFO     | sum of deviations: 118220775.49999976
[2024-06-22 09:34:31] 2024-06-22 07:34:17,675 | INFO     | mean x: 1719034623.5
[2024-06-22 09:34:31] 2024-06-22 07:34:17,675 | INFO     | mean y: 2363736.804347826
[2024-06-22 09:34:31] 2024-06-22 07:34:17,675 | INFO     | -- intersect: -51503500.905778356
[2024-06-22 09:34:31] 2024-06-22 07:34:17,675 | INFO     | intersect: -51503500.905778356
[2024-06-22 09:34:31] 2024-06-22 07:34:17,675 | INFO     | chi2: 0.0014729248499864558
[2024-06-22 09:34:31] 2024-06-22 07:34:17,675 | INFO     | current chi2=0.0014729248499864558 (change=97.49121539276426 %)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,676 | INFO     | model: linear, x: [1719027944.0, 1719028005.0, 1719028066.0, 1719028127.0, 1719028188.0, 1719028249.0, 1719028310.0, 1719028371.0, 1719028432.0, 1719028493.0, 1719
[2024-06-22 09:34:31] 2024-06-22 07:34:17,676 | INFO     | sum of square deviations: 3531973200.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,677 | INFO     | sum of deviations: -239117865.0000002
[2024-06-22 09:34:31] 2024-06-22 07:34:17,677 | INFO     | mean x: 1719034776.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,677 | INFO     | mean y: 2363961.48
[2024-06-22 09:34:31] 2024-06-22 07:34:17,678 | INFO     | -- intersect: 118744211.90145667
[2024-06-22 09:34:31] 2024-06-22 07:34:17,678 | INFO     | intersect: 118744211.90145667
[2024-06-22 09:34:31] 2024-06-22 07:34:17,678 | INFO     | chi2: 0.0013369125907472085
[2024-06-22 09:34:31] 2024-06-22 07:34:17,678 | INFO     | current chi2=0.0013369125907472085 (change=9.234161487634482 %)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,678 | INFO     | left removable region: 40
[2024-06-22 09:34:31] 2024-06-22 07:34:17,678 | INFO     | model: linear, x: [1719029164.0, 1719029225.0, 1719029286.0, 1719029347.0, 1719029408.0, 1719029469.0, 1719029530.0, 1719029591.0, 1719029652.0, 1719029713.0, 1719
[2024-06-22 09:34:31] 2024-06-22 07:34:17,679 | INFO     | sum of square deviations: 2443580700.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,680 | INFO     | sum of deviations: 1242268843.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,680 | INFO     | mean x: 1719035203.0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,680 | INFO     | mean y: 2362627.4170854273
[2024-06-22 09:34:31] 2024-06-22 07:34:17,680 | INFO     | -- intersect: -871561394.2888807
[2024-06-22 09:34:31] 2024-06-22 07:34:17,680 | INFO     | intersect: -871561394.2888807
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | chi2: 0.0005931778928719207
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | -- intersect: -871561394.2888807
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | current memory leak: 0.51 B/s (using 199 data points, chi2=0.00)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | ..............................
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | . Timing measurements:
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | . get job = 0 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | . initial setup = 1 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,681 | INFO     | . payload setup = 8 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,682 | INFO     | . stage-in = 0 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,682 | INFO     | . payload execution = 14921 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,682 | INFO     | . stage-out = 1 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,682 | INFO     | . log creation = 0 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,682 | INFO     | ..............................
[2024-06-22 09:34:31] 2024-06-22 07:34:17,756 | INFO     | 
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | job summary report
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | --------------------------------------------------
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | PanDA job id: 6239015199
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | task id: 40024014
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | errors: (none)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | pilot state: finished 
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | transexitcode: 0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,757 | INFO     | exeerrorcode: 0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | exeerrordiag: 
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | exitcode: 0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | exitmsg: OK
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | cpuconsumptiontime: 56551 s
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | nevents: 400
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | neventsw: 0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | pid: 2943420
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | pgrp: 2943420
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | corecount: 4
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | event service: False
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | sizes: {0: 2385391, 1: 2386938, 8: 2387144, 12: 2387172, 14934: 2417913, 14935: 2427079, 14948: 2427193}
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | --------------------------------------------------
[2024-06-22 09:34:31] 2024-06-22 07:34:17,758 | INFO     | 
[2024-06-22 09:34:31] 2024-06-22 07:34:17,759 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-06-22 09:34:31] 2024-06-22 07:34:17,787 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,787 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,787 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,787 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,788 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,789 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 09:34:31] 2024-06-22 07:34:17,789 | INFO     | job 6239015199 has completed (purged errors)
[2024-06-22 09:34:31] 2024-06-22 07:34:17,789 | INFO     | overall cleanup function is called
[2024-06-22 09:34:31] 2024-06-22 07:34:18,796 | INFO     | --- collectZombieJob: --- 10, [2943420]
[2024-06-22 09:34:31] 2024-06-22 07:34:18,796 | INFO     | zombie collector waiting for pid 2943420
[2024-06-22 09:34:31] 2024-06-22 07:34:18,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 09:34:31] 2024-06-22 07:34:19,801 | INFO     | collected zombie processes
[2024-06-22 09:34:31] 2024-06-22 07:34:19,801 | INFO     | will now attempt to kill all subprocesses of pid=2943420
[2024-06-22 09:34:31] 2024-06-22 07:34:20,074 | INFO     | process IDs to be killed: [2943420] (in reverse order)
[2024-06-22 09:34:31] 2024-06-22 07:34:20,265 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 09:34:31] 2024-06-22 07:34:20,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 09:34:31] 2024-06-22 07:34:20,284 | INFO     | did not find any defunct processes belonging to 2943420
[2024-06-22 09:34:31] 2024-06-22 07:34:20,297 | INFO     | did not find any defunct processes belonging to 2943420
[2024-06-22 09:34:31] 2024-06-22 07:34:20,297 | INFO     | ready for new job
[2024-06-22 09:34:31] 2024-06-22 07:34:20,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 09:34:31] 2024-06-22 07:34:20,299 | INFO     | *************************************
[2024-06-22 09:34:31] 2024-06-22 07:34:20,299 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 09:34:31] 2024-06-22 07:34:20,299 | INFO     | *************************************
[2024-06-22 09:34:31] 2024-06-22 07:34:20,299 | INFO     | 
[2024-06-22 09:34:31] 2024-06-22 07:34:20,304 | INFO     | architecture information:
[2024-06-22 09:34:31] 2024-06-22 07:34:20,304 | INFO     | executing command: cat /etc/os-release
[2024-06-22 09:34:31] 2024-06-22 07:34:20,321 | INFO     | cat /etc/os-release:
[2024-06-22 09:34:31] NAME="CentOS Linux"
[2024-06-22 09:34:31] VERSION="7 (Core)"
[2024-06-22 09:34:31] ID="centos"
[2024-06-22 09:34:31] ID_LIKE="rhel fedora"
[2024-06-22 09:34:31] VERSION_ID="7"
[2024-06-22 09:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 09:34:31] ANSI_COLOR="0;31"
[2024-06-22 09:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 09:34:31] HOME_URL="https://www.centos.org/"
[2024-06-22 09:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 09:34:31] 
[2024-06-22 09:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 09:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 09:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 09:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 09:34:31] 
[2024-06-22 09:34:31] 2024-06-22 07:34:20,321 | INFO     | *************************************
[2024-06-22 09:34:31] 2024-06-22 07:34:20,823 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-06-22 09:34:31] 2024-06-22 07:34:20,849 | INFO     | sufficient remaining disk space (3159519920128 B)
[2024-06-22 09:34:31] 2024-06-22 07:34:20,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 09:34:31] 2024-06-22 07:34:20,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 09:34:31] 2024-06-22 07:34:20,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 09:34:31] 2024-06-22 07:34:20,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:34:31] 2024-06-22 07:34:20,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 09:34:31] 2024-06-22 07:34:20,851 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 09:34:31] 2024-06-22 07:34:20,851 | INFO     | aborting loop
[2024-06-22 09:34:31] 2024-06-22 07:34:20,852 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 09:34:31] 2024-06-22 07:34:20,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 09:34:31] 2024-06-22 07:34:20,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 09:34:31] 2024-06-22 07:34:20,883 | INFO     | all payload control threads have been joined
[2024-06-22 09:34:31] 2024-06-22 07:34:21,449 | INFO     | all data control threads have been joined
[2024-06-22 09:34:31] 2024-06-22 07:34:21,855 | INFO     | [job] retrieve thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:21,857 | INFO     | [job] job monitor thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:21,878 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:21,888 | INFO     | [payload] control thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:21,922 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:21,939 | INFO     | [data] copytool_in thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:21,964 | INFO     | all job control threads have been joined
[2024-06-22 09:34:31] 2024-06-22 07:34:21,971 | INFO     | [job] validate thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,366 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,378 | INFO     | [payload] failed_post thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,454 | INFO     | [data] control thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,491 | INFO     | [payload] validate_post thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:34:31] 2024-06-22 07:34:22,857 | INFO     | [data] copytool_out thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,864 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:22,969 | INFO     | [job] control thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:23,772 | INFO     | [job] queue monitor thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:24,856 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 09:34:31] 2024-06-22 07:34:25,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47939339637824)>', '<ExcThread(monitor, started 47939524114176)>']
[2024-06-22 09:34:31] 2024-06-22 07:34:25,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 09:34:31] 2024-06-22 07:34:25,878 | INFO     | [monitor] control thread has ended
[2024-06-22 09:34:31] 2024-06-22 07:34:30,486 | INFO     | all workflow threads have been joined
[2024-06-22 09:34:31] 2024-06-22 07:34:30,486 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 09:34:31] 2024-06-22 07:34:30,486 | INFO     | traces error code: 0
[2024-06-22 09:34:31] 2024-06-22 07:34:30,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 09:34:31] 2024-06-22 07:34:30,648 [wrapper] ==== pilot stdout END ====
[2024-06-22 09:34:31] 2024-06-22 07:34:30,651 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 09:34:31] 2024-06-22 07:34:30,653 [wrapper] pilotpid: 2935215
[2024-06-22 09:34:31] 2024-06-22 07:34:30,655 [wrapper] Pilot exit status: 0
[2024-06-22 09:34:31] 2024-06-22 07:34:30,706 [wrapper] pandaids: 6239015199
[2024-06-22 09:34:31] 2024-06-22 07:34:30,804 [wrapper] cleanup supervisor_pilot 4004828 2935216
[2024-06-22 09:34:31] 2024-06-22 07:34:30,810 [wrapper] Test setup, not cleaning
[2024-06-22 09:34:31] 2024-06-22 07:34:30,815 [wrapper] ==== wrapper stdout END ====
[2024-06-22 09:34:31] 2024-06-22 07:34:30,820 [wrapper] ==== wrapper stderr END ====
[2024-06-22 09:34:31] 2024-06-22 07:34:30,828 [wrapper] apfmon messages muted
[2024-06-22 09:34:31]  *** Error codes and diagnostics ***
[2024-06-22 09:34:31]     "exeErrorCode": 0,
[2024-06-22 09:34:31]     "exeErrorDiag": "",
[2024-06-22 09:34:31]     "pilotErrorCode": 0,
[2024-06-22 09:34:31]     "pilotErrorDiag": "",
[2024-06-22 09:34:31]  *** Listing of results directory ***
[2024-06-22 09:34:31] total 843272
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc    469766 Jun 20 20:32 pilot3.tar.gz
[2024-06-22 09:34:31] -rwx------ 1 boinc boinc     32308 Jun 20 20:59 runpilot2-wrapper.sh
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc      5654 Jun 20 20:59 queuedata.json
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc       100 Jun 22 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 09:34:31] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 05:24 run_atlas
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc       105 Jun 22 05:24 job.xml
[2024-06-22 09:34:31] -rw-r--r-- 2 boinc boinc 599138740 Jun 22 05:24 EVNT.40024012._000010.pool.root.1
[2024-06-22 09:34:31] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:24 start_atlas.sh
[2024-06-22 09:34:31] drwxrwx--x 2 boinc boinc      4096 Jun 22 05:24 shared
[2024-06-22 09:34:31] -rw-r--r-- 2 boinc boinc    482468 Jun 22 05:24 input.tar.gz
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc      6642 Jun 22 05:24 init_data.xml
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc         0 Jun 22 05:24 boinc_lockfile
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc      2516 Jun 22 05:24 pandaJob.out
[2024-06-22 09:34:31] -rw------- 1 boinc boinc       424 Jun 22 05:24 setup.sh.local
[2024-06-22 09:34:31] -rw------- 1 boinc boinc   1025953 Jun 22 05:24 agis_schedconf.cvmfs.json
[2024-06-22 09:34:31] -rw------- 1 boinc boinc   1321363 Jun 22 05:24 cric_ddmendpoints.json
[2024-06-22 09:34:31] drwx------ 4 boinc boinc      4096 Jun 22 05:24 pilot3
[2024-06-22 09:34:31] -rw------- 1 boinc boinc 257163250 Jun 22 09:33 HITS.40024014._000227.pool.root.1
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc       532 Jun 22 09:33 boinc_task_state.xml
[2024-06-22 09:34:31] -rw------- 1 boinc boinc        95 Jun 22 09:33 pilot_heartbeat.json
[2024-06-22 09:34:31] -rw------- 1 boinc boinc      1036 Jun 22 09:34 memory_monitor_summary.json
[2024-06-22 09:34:31] -rw------- 1 boinc boinc         0 Jun 22 09:34 agis_ddmendpoints.agis.ALL.json
[2024-06-22 09:34:31] -rw------- 1 boinc boinc    333409 Jun 22 09:34 log.40024014._000227.job.log.tgz.1
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc        28 Jun 22 09:34 wrapper_checkpoint.txt
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc      8192 Jun 22 09:34 boinc_mmap_file
[2024-06-22 09:34:31] -rw------- 1 boinc boinc      7703 Jun 22 09:34 heartbeat.json
[2024-06-22 09:34:31] -rw------- 1 boinc boinc      4345 Jun 22 09:34 pilotlog.txt
[2024-06-22 09:34:31] -rw------- 1 boinc boinc   1501654 Jun 22 09:34 log.40024014._000227.job.log.1
[2024-06-22 09:34:31] -rw------- 1 boinc boinc       357 Jun 22 09:34 output.list
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc       620 Jun 22 09:34 runtime_log
[2024-06-22 09:34:31] -rw------- 1 boinc boinc   1853440 Jun 22 09:34 result.tar.gz
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc     11410 Jun 22 09:34 runtime_log.err
[2024-06-22 09:34:31] -rw------- 1 boinc boinc       657 Jun 22 09:34 F0PLDmbBce5n7Olcko1bjSoqABFKDmABFKDmOtvXDme4qKDmyaPTNm.diag
[2024-06-22 09:34:31] -rw-r--r-- 1 boinc boinc     21336 Jun 22 09:34 stderr.txt
[2024-06-22 09:34:31] HITS file was successfully produced:
[2024-06-22 09:34:31] -rw------- 1 boinc boinc 257163250 Jun 22 09:33 shared/HITS.pool.root.1
[2024-06-22 09:34:31]  *** Contents of shared directory: ***
[2024-06-22 09:34:31] total 838548
[2024-06-22 09:34:31] -rw-r--r-- 2 boinc boinc 599138740 Jun 22 05:24 ATLAS.root_0
[2024-06-22 09:34:31] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:24 start_atlas.sh
[2024-06-22 09:34:31] -rw-r--r-- 2 boinc boinc    482468 Jun 22 05:24 input.tar.gz
[2024-06-22 09:34:31] -rw------- 1 boinc boinc 257163250 Jun 22 09:33 HITS.pool.root.1
[2024-06-22 09:34:31] -rw------- 1 boinc boinc   1853440 Jun 22 09:34 result.tar.gz
09:34:33 (2930480): run_atlas exited; CPU time 56198.291169
09:34:33 (2930480): called boinc_finish(0)

</stderr_txt>
]]>

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