Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-21 19:26:44 (715075): Detected: vboxwrapper 26206
2024-06-21 19:26:44 (715075): Detected: BOINC client v7.24.1
2024-06-21 19:26:44 (715075): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-06-21 19:26:44 (715075): Successfully copied 'init_data.xml' to the shared directory.
2024-06-21 19:26:44 (715075): Create VM. (boinc_17c319626fe2d17d, slot#0)
2024-06-21 19:26:44 (715075): Setting Memory Size for VM. (4400MB)
2024-06-21 19:26:45 (715075): Setting CPU Count for VM. (4)
2024-06-21 19:26:45 (715075): Setting Chipset Options for VM.
2024-06-21 19:26:45 (715075): Setting Graphics Controller Options for VM.
2024-06-21 19:26:45 (715075): Setting Boot Options for VM.
2024-06-21 19:26:45 (715075): Setting Network Configuration for NAT.
2024-06-21 19:26:45 (715075): Enabling VM Network Access.
2024-06-21 19:26:45 (715075): Disabling USB Support for VM.
2024-06-21 19:26:45 (715075): Disabling COM Port Support for VM.
2024-06-21 19:26:45 (715075): Disabling LPT Port Support for VM.
2024-06-21 19:26:45 (715075): Disabling Audio Support for VM.
2024-06-21 19:26:45 (715075): Disabling Clipboard Support for VM.
2024-06-21 19:26:46 (715075): Disabling Drag and Drop Support for VM.
2024-06-21 19:26:46 (715075): Adding storage controller(s) to VM.
2024-06-21 19:26:46 (715075): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-21 19:26:47 (715075): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-21 19:26:48 (715075): forwarding host port 37273 to guest port 80
2024-06-21 19:26:48 (715075): Enabling remote desktop for VM.
2024-06-21 19:26:48 (715075): Required extension pack not installed, remote desktop not enabled.
2024-06-21 19:26:48 (715075): Enabling shared directory for VM.
2024-06-21 19:26:48 (715075): Starting VM using VBoxManage interface. (boinc_17c319626fe2d17d, slot#0)
2024-06-21 19:26:49 (715075): Successfully started VM. (PID = '715333')
2024-06-21 19:26:49 (715075): Reporting VM Process ID to BOINC.
2024-06-21 19:26:49 (715075): Guest Log: BIOS: VirtualBox 7.0.18
2024-06-21 19:26:49 (715075): Guest Log: CPUID EDX: 0x178bfbff
2024-06-21 19:26:49 (715075): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-21 19:26:49 (715075): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-21 19:26:49 (715075): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-21 19:26:49 (715075): Detected: Web Application Enabled (http://localhost:37273)
2024-06-21 19:26:49 (715075): Preference change detected
2024-06-21 19:26:49 (715075): Setting CPU throttle for VM. (50%)
2024-06-21 19:26:49 (715075): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-21 19:26:51 (715075): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-21 19:26:51 (715075): Guest Log: BIOS: Booting from Hard Disk...
2024-06-21 19:26:55 (715075): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-21 19:26:55 (715075): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-21 19:26:55 (715075): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-21 19:27:04 (715075): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-21 19:27:04 (715075): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-21 19:27:18 (715075): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000123 main     Log opened 2024-06-21T17:27:16.626438000Z
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000190 main     OS Product: Linux
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000207 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000219 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000231 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000232 main     Process ID: 1294
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.000232 main     Package type: LINUX_64BITS_GENERIC
2024-06-21 19:27:18 (715075): Guest Log: 00:00:00.001504 main     5.2.32 r132073 started. Verbose level = 0
2024-06-21 19:27:18 (715075): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-21 19:27:18 (715075): Guest Log: [INFO] Mounting shared directory
2024-06-21 19:27:19 (715075): Guest Log: [INFO] Checking for init_data.xml
2024-06-21 19:27:27 (715075): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-21 19:27:27 (715075): Guest Log: [INFO] Detected branch: prod
2024-06-21 19:27:27 (715075): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-21 19:27:27 (715075): Guest Log: Copying input files
2024-06-21 19:27:38 (715075): Guest Log: Copied input files into RunAtlas.
2024-06-21 19:27:38 (715075): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-21 19:27:38 (715075): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-21 19:27:38 (715075): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-21 19:27:38 (715075): Guest Log: Further information can be found at the LHC@home message board.
2024-06-21 19:27:46 (715075): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-21 19:27:46 (715075): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-21 19:27:46 (715075): Guest Log: 2.6.3.0 1571 0 32236 134137 4 1 3117205 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-06-21 19:27:49 (715075): Guest Log: copied the webapp to /var/www
2024-06-21 19:27:49 (715075): Guest Log: ATHENA_PROC_NUMBER=4
2024-06-21 19:27:49 (715075): Guest Log: ATHENA_CORE_NUMBER=4
2024-06-21 19:27:50 (715075): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-21 19:27:50 (715075): Guest Log:  *** Starting ATLAS job. (PandaID=6239015190 taskID=40024014) ***
2024-06-21 21:05:50 (715075): Status Report: Elapsed Time: '6000.000000'
2024-06-21 21:05:50 (715075): Status Report: CPU Time: '10527.390000'
2024-06-21 22:44:50 (715075): Status Report: Elapsed Time: '12000.000000'
2024-06-21 22:44:50 (715075): Status Report: CPU Time: '22846.140000'
2024-06-21 23:02:00 (715075): Guest Log:  *** Job finished ***
2024-06-21 23:02:00 (715075): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:47,839 | INFO     | [data] queue_monitor thread has finished
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:51,456 | INFO     | job.realtimelogging is not enabled
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:52,458 | INFO     | [payload] run_realtimelog thread has finished
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:53,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015039321920)>', '<ExcThread(monitor, started 140014339987200)>']
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:53,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:53,576 | INFO     | [monitor] control thread has ended
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,336 | INFO     | all workflow threads have been joined
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,336 | INFO     | end of generic workflow (traces error code: 0)
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,337 | INFO     | traces error code: 0
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,427 [wrapper] ==== pilot stdout END ====
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,433 [wrapper] ==== wrapper stdout RESUME ====
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,438 [wrapper] pilotpid: 6471
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,443 [wrapper] Pilot exit status: 0
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,476 [wrapper] pandaids: 6239015190
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,510 [wrapper] cleanup supervisor_pilot 10262 6472
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,521 [wrapper] Test setup, not cleaning
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,527 [wrapper] ==== wrapper stdout END ====
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,532 [wrapper] ==== wrapper stderr END ====
2024-06-21 23:02:00 (715075): Guest Log: 2024-06-21 21:01:58,542 [wrapper] apfmon messages muted
2024-06-21 23:02:00 (715075): Guest Log:  *** Error codes and diagnostics ***
2024-06-21 23:02:00 (715075): Guest Log:     "exeErrorCode": 0,
2024-06-21 23:02:00 (715075): Guest Log:     "exeErrorDiag": "",
2024-06-21 23:02:00 (715075): Guest Log:     "pilotErrorCode": 0,
2024-06-21 23:02:00 (715075): Guest Log:     "pilotErrorDiag": "",
2024-06-21 23:02:00 (715075): Guest Log:  *** Listing of results directory ***
2024-06-21 23:02:00 (715075): Guest Log: total 254352
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 20 18:32 pilot3.tar.gz
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 20 18:52 queuedata.json
2024-06-21 23:02:00 (715075): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 20 18:53 runpilot2-wrapper.sh
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas     17537 Jun 21 17:27 start_atlas.sh
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas    482474 Jun 21 17:27 input.tar.gz
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas      6659 Jun 21 17:27 init_data.xml
2024-06-21 23:02:00 (715075): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 21 17:27 EVNT.40024012._000009.pool.root.1 -> /data/./ATLAS.root_0
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas      2516 Jun 21 17:27 pandaJob.out
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas       424 Jun 21 17:27 setup.sh.local
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas   1025624 Jun 21 17:29 agis_schedconf.cvmfs.json
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 21 17:29 cric_ddmendpoints.json
2024-06-21 23:02:00 (715075): Guest Log: drwx------. 4 atlas atlas      4096 Jun 21 17:29 pilot3
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas 255131177 Jun 21 20:59 HITS.40024014._000222.pool.root.1
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas      1033 Jun 21 21:00 memory_monitor_summary.json
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas         0 Jun 21 21:00 agis_ddmendpoints.agis.ALL.json
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas    289595 Jun 21 21:00 log.40024014._000222.job.log.tgz.1
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas        95 Jun 21 21:00 pilot_heartbeat.json
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas      7733 Jun 21 21:01 heartbeat.json
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas      4343 Jun 21 21:01 pilotlog.txt
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas    639243 Jun 21 21:01 log.40024014._000222.job.log.1
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas       357 Jun 21 21:01 output.list
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 21 21:01 runtime_log
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas    952320 Jun 21 21:01 result.tar.gz
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas       677 Jun 21 21:01 T6fMDmY5be5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmRolKDmoU90Mm.diag
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 atlas atlas     11024 Jun 21 21:01 runtime_log.err
2024-06-21 23:02:00 (715075): Guest Log: Looking for outputfile HITS.40024014._000222.pool.root.1
2024-06-21 23:02:00 (715075): Guest Log: HITS file was successfully produced
2024-06-21 23:02:00 (715075): Guest Log: -rw-------. 1 atlas atlas 255131177 Jun 21 20:59 /home/atlas/RunAtlas/HITS.40024014._000222.pool.root.1
2024-06-21 23:02:00 (715075): Guest Log: Successfully finished the ATLAS job!
2024-06-21 23:02:00 (715075): Guest Log: Copying the results back to the shared directory!
2024-06-21 23:02:00 (715075): Guest Log:  *** Contents of shared directory: ***
2024-06-21 23:02:00 (715075): Guest Log: total 584356
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 root root 596909884 Jun 21 17:26 ATLAS.root_0
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 root root      6659 Jun 21 17:26 init_data.xml
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 root root    482474 Jun 21 17:26 input.tar.gz
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 root root    952320 Jun 21 21:02 result.tar.gz
2024-06-21 23:02:00 (715075): Guest Log: -rw-r--r--. 1 root root     17537 Jun 21 17:26 start_atlas.sh
2024-06-21 23:02:00 (715075): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-21 23:02:00 (715075): VM Completion File Detected.
2024-06-21 23:02:00 (715075): Powering off VM.
2024-06-21 23:02:00 (715075): Successfully stopped VM.
2024-06-21 23:02:00 (715075): Deregistering VM. (boinc_17c319626fe2d17d, slot#0)
2024-06-21 23:02:00 (715075): Removing network bandwidth throttle group from VM.
2024-06-21 23:02:00 (715075): Removing VM from VirtualBox.
23:02:06 (715075): called boinc_finish(0)

</stderr_txt>
]]>

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