Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:02 (2777379): wrapper (7.7.26015): starting
05:43:02 (2777379): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 05:43:02] Arguments: --nthreads 4
[2024-06-22 05:43:02] Threads: 4
[2024-06-22 05:43:02] Checking for CVMFS
[2024-06-22 05:43:02] No cvmfs_config command found, will try listing directly
[2024-06-22 05:43:02] CVMFS is ok
[2024-06-22 05:43:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 05:43:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 05:43:02] Further information can be found at the LHC@home message board.
[2024-06-22 05:43:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 05:43:02] Checking for apptainer binary...
[2024-06-22 05:43:02] which: no apptainer in ((null))
[2024-06-22 05:43:02] apptainer is not installed, using version from CVMFS
[2024-06-22 05:43:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 05:43:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-06-22 05:43:03] apptainer works
[2024-06-22 05:43:03] Set ATHENA_PROC_NUMBER=4
[2024-06-22 05:43:03] Set ATHENA_CORE_NUMBER=4
[2024-06-22 05:43:03] Starting ATLAS job with PandaID=6239015183
[2024-06-22 05:43:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 09:45:07]  *** The last 200 lines of the pilot log: ***
[2024-06-22 09:45:07] 2024-06-22 07:44:48,938 | INFO     | current chi2=4.226443222344856 (change=-0.003373655633888363 %)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,938 | INFO     | right removable region: 231
[2024-06-22 09:45:07] 2024-06-22 07:44:48,938 | INFO     | model: linear, x: [1719028136.0, 1719028197.0, 1719028258.0, 1719028319.0, 1719028380.0, 1719028441.0, 1719028502.0, 1719028563.0, 1719028624.0, 1719028685.0, 1719
[2024-06-22 09:45:07] 2024-06-22 07:44:48,939 | INFO     | sum of square deviations: 3871990738.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,940 | INFO     | sum of deviations: 56874686083.00001
[2024-06-22 09:45:07] 2024-06-22 07:44:48,940 | INFO     | mean x: 1719035181.5
[2024-06-22 09:45:07] 2024-06-22 07:44:48,940 | INFO     | mean y: 2337014.8362068967
[2024-06-22 09:45:07] 2024-06-22 07:44:48,940 | INFO     | -- intersect: -25248133073.82583
[2024-06-22 09:45:07] 2024-06-22 07:44:48,940 | INFO     | intersect: -25248133073.82583
[2024-06-22 09:45:07] 2024-06-22 07:44:48,940 | INFO     | chi2: 1.635225881691132
[2024-06-22 09:45:07] 2024-06-22 07:44:48,941 | INFO     | current chi2=1.635225881691132 (change=61.308339836777634 %)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,941 | INFO     | model: linear, x: [1719028441.0, 1719028502.0, 1719028563.0, 1719028624.0, 1719028685.0, 1719028746.0, 1719028807.0, 1719028868.0, 1719028929.0, 1719028990.0, 1719
[2024-06-22 09:45:07] 2024-06-22 07:44:48,941 | INFO     | sum of square deviations: 3627000098.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,942 | INFO     | sum of deviations: 10688785451.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,942 | INFO     | mean x: 1719035334.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,942 | INFO     | mean y: 2365766.594713656
[2024-06-22 09:45:07] 2024-06-22 07:44:48,942 | INFO     | -- intersect: -5063639022.858183
[2024-06-22 09:45:07] 2024-06-22 07:44:48,943 | INFO     | intersect: -5063639022.858183
[2024-06-22 09:45:07] 2024-06-22 07:44:48,943 | INFO     | chi2: 0.05570822611004743
[2024-06-22 09:45:07] 2024-06-22 07:44:48,943 | INFO     | current chi2=0.05570822611004743 (change=96.59323970261315 %)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,943 | INFO     | model: linear, x: [1719028746.0, 1719028807.0, 1719028868.0, 1719028929.0, 1719028990.0, 1719029051.0, 1719029112.0, 1719029173.0, 1719029234.0, 1719029295.0, 1719
[2024-06-22 09:45:07] 2024-06-22 07:44:48,943 | INFO     | sum of square deviations: 3392567795.5
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | sum of deviations: 4542090469.500002
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | mean x: 1719035486.5
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | mean y: 2369720.6441441444
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | -- intersect: -2299136150.607928
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | intersect: -2299136150.607928
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | chi2: 0.00044450839688676627
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | current chi2=0.00044450839688676627 (change=99.20207763211006 %)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,945 | INFO     | model: linear, x: [1719029051.0, 1719029112.0, 1719029173.0, 1719029234.0, 1719029295.0, 1719029356.0, 1719029417.0, 1719029478.0, 1719029539.0, 1719029600.0, 1719
[2024-06-22 09:45:07] 2024-06-22 07:44:48,946 | INFO     | sum of square deviations: 3168461268.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | sum of deviations: 3823453282.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | mean x: 1719035639.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | mean y: 2370207.9032258065
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | -- intersect: -2072028656.3626184
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | intersect: -2072028656.3626184
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | chi2: 0.00025794779436284044
[2024-06-22 09:45:07] 2024-06-22 07:44:48,947 | INFO     | current chi2=0.00025794779436284044 (change=41.97009636500751 %)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,948 | INFO     | model: linear, x: [1719029356.0, 1719029417.0, 1719029478.0, 1719029539.0, 1719029600.0, 1719029661.0, 1719029722.0, 1719029783.0, 1719029844.0, 1719029905.0, 1719
[2024-06-22 09:45:07] 2024-06-22 07:44:48,948 | INFO     | sum of square deviations: 2954447953.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,949 | INFO     | sum of deviations: 3467150909.5000014
[2024-06-22 09:45:07] 2024-06-22 07:44:48,949 | INFO     | mean x: 1719035791.5
[2024-06-22 09:45:07] 2024-06-22 07:44:48,949 | INFO     | mean y: 2370460.787735849
[2024-06-22 09:45:07] 2024-06-22 07:44:48,949 | INFO     | -- intersect: -2014979853.984345
[2024-06-22 09:45:07] 2024-06-22 07:44:48,949 | INFO     | intersect: -2014979853.984345
[2024-06-22 09:45:07] 2024-06-22 07:44:48,950 | INFO     | chi2: 0.00023752323455888502
[2024-06-22 09:45:07] 2024-06-22 07:44:48,950 | INFO     | current chi2=0.00023752323455888502 (change=7.918098254883839 %)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,950 | INFO     | left removable region: 50
[2024-06-22 09:45:07] 2024-06-22 07:44:48,950 | INFO     | model: linear, x: [1719030881.0, 1719030942.0, 1719031003.0, 1719031064.0, 1719031125.0, 1719031186.0, 1719031247.0, 1719031308.0, 1719031369.0, 1719031430.0, 1719
[2024-06-22 09:45:07] 2024-06-22 07:44:48,950 | INFO     | sum of square deviations: 1838657730.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,951 | INFO     | sum of deviations: 2058381255.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,951 | INFO     | mean x: 1719036371.0
[2024-06-22 09:45:07] 2024-06-22 07:44:48,951 | INFO     | mean y: 2371336.917127072
[2024-06-22 09:45:07] 2024-06-22 07:44:48,951 | INFO     | -- intersect: -1922093551.2432299
[2024-06-22 09:45:07] 2024-06-22 07:44:48,951 | INFO     | intersect: -1922093551.2432299
[2024-06-22 09:45:07] 2024-06-22 07:44:48,951 | INFO     | chi2: 4.000949169590652e-05
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | -- intersect: -1922093551.2432299
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | current memory leak: 1.12 B/s (using 181 data points, chi2=0.00)
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | ..............................
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . Timing measurements:
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . get job = 0 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . initial setup = 1 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . payload setup = 9 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . stage-in = 0 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . payload execution = 14449 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,952 | INFO     | . stage-out = 0 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,953 | INFO     | . log creation = 0 s
[2024-06-22 09:45:07] 2024-06-22 07:44:48,953 | INFO     | ..............................
[2024-06-22 09:45:07] 2024-06-22 07:44:49,312 | INFO     | 
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | job summary report
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | --------------------------------------------------
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | PanDA job id: 6239015183
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | task id: 40024014
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | errors: (none)
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | pilot state: finished 
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | transexitcode: 0
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | exeerrorcode: 0
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | exeerrordiag: 
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | exitcode: 0
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | exitmsg: OK
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | cpuconsumptiontime: 54789 s
[2024-06-22 09:45:07] 2024-06-22 07:44:49,313 | INFO     | nevents: 400
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | neventsw: 0
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | pid: 2798946
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | pgrp: 2798946
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | corecount: 4
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | event service: False
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | sizes: {0: 2385392, 1: 2386939, 7: 2387145, 12: 2387173, 14463: 2417581, 14464: 2426563, 14465: 2426747, 14474: 2426917}
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | --------------------------------------------------
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | 
[2024-06-22 09:45:07] 2024-06-22 07:44:49,314 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/1
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | job 6239015183 has completed (purged errors)
[2024-06-22 09:45:07] 2024-06-22 07:44:49,340 | INFO     | overall cleanup function is called
[2024-06-22 09:45:07] 2024-06-22 07:44:50,347 | INFO     | --- collectZombieJob: --- 10, [2798946]
[2024-06-22 09:45:07] 2024-06-22 07:44:50,348 | INFO     | zombie collector waiting for pid 2798946
[2024-06-22 09:45:07] 2024-06-22 07:44:50,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 09:45:07] 2024-06-22 07:44:51,353 | INFO     | collected zombie processes
[2024-06-22 09:45:07] 2024-06-22 07:44:51,354 | INFO     | will now attempt to kill all subprocesses of pid=2798946
[2024-06-22 09:45:07] 2024-06-22 07:44:51,661 | INFO     | process IDs to be killed: [2798946] (in reverse order)
[2024-06-22 09:45:07] 2024-06-22 07:44:51,876 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 09:45:07] 2024-06-22 07:44:51,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 09:45:07] 2024-06-22 07:44:51,896 | INFO     | did not find any defunct processes belonging to 2798946
[2024-06-22 09:45:07] 2024-06-22 07:44:51,909 | INFO     | did not find any defunct processes belonging to 2798946
[2024-06-22 09:45:07] 2024-06-22 07:44:51,909 | INFO     | ready for new job
[2024-06-22 09:45:07] 2024-06-22 07:44:51,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 09:45:07] 2024-06-22 07:44:51,911 | INFO     | *************************************
[2024-06-22 09:45:07] 2024-06-22 07:44:51,912 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 09:45:07] 2024-06-22 07:44:51,912 | INFO     | *************************************
[2024-06-22 09:45:07] 2024-06-22 07:44:51,912 | INFO     | 
[2024-06-22 09:45:07] 2024-06-22 07:44:51,919 | INFO     | architecture information:
[2024-06-22 09:45:07] 2024-06-22 07:44:51,919 | INFO     | executing command: cat /etc/os-release
[2024-06-22 09:45:07] 2024-06-22 07:44:51,944 | INFO     | cat /etc/os-release:
[2024-06-22 09:45:07] NAME="CentOS Linux"
[2024-06-22 09:45:07] VERSION="7 (Core)"
[2024-06-22 09:45:07] ID="centos"
[2024-06-22 09:45:07] ID_LIKE="rhel fedora"
[2024-06-22 09:45:07] VERSION_ID="7"
[2024-06-22 09:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 09:45:07] ANSI_COLOR="0;31"
[2024-06-22 09:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 09:45:07] HOME_URL="https://www.centos.org/"
[2024-06-22 09:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 09:45:07] 
[2024-06-22 09:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 09:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 09:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 09:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 09:45:07] 
[2024-06-22 09:45:07] 2024-06-22 07:44:51,945 | INFO     | *************************************
[2024-06-22 09:45:07] 2024-06-22 07:44:52,448 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/1
[2024-06-22 09:45:07] 2024-06-22 07:44:52,471 | INFO     | sufficient remaining disk space (3133378920448 B)
[2024-06-22 09:45:07] 2024-06-22 07:44:52,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 09:45:07] 2024-06-22 07:44:52,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 09:45:07] 2024-06-22 07:44:52,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 09:45:07] 2024-06-22 07:44:52,532 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-22 09:45:07] 2024-06-22 07:44:52,533 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-22 09:45:07] 2024-06-22 07:44:52,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:45:07] 2024-06-22 07:44:52,533 | INFO     | will abort loop
[2024-06-22 09:45:07] 2024-06-22 07:44:52,704 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 09:45:07] 2024-06-22 07:44:52,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 09:45:07] 2024-06-22 07:44:52,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 09:45:07] 2024-06-22 07:44:52,953 | INFO     | all payload control threads have been joined
[2024-06-22 09:45:07] 2024-06-22 07:44:53,278 | INFO     | all data control threads have been joined
[2024-06-22 09:45:07] 2024-06-22 07:44:53,409 | INFO     | all job control threads have been joined
[2024-06-22 09:45:07] 2024-06-22 07:44:53,477 | INFO     | [job] retrieve thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,537 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,538 | INFO     | [job] job monitor thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,675 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,712 | INFO     | [payload] validate_post thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,857 | INFO     | [job] validate thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,871 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,955 | INFO     | [payload] failed_post thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:53,958 | INFO     | [payload] control thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:54,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 09:45:07] 2024-06-22 07:44:54,284 | INFO     | [data] control thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:54,334 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:54,406 | INFO     | [data] copytool_in thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:54,415 | INFO     | [job] control thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:54,478 | INFO     | [data] copytool_out thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:54,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 09:45:07] 2024-06-22 07:44:55,032 | INFO     | [job] queue monitor thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:44:58,815 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 09:45:07] 2024-06-22 07:45:00,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47161357407296)>', '<ExcThread(monitor, started 47161539782400)>']
[2024-06-22 09:45:07] 2024-06-22 07:45:01,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 09:45:07] 2024-06-22 07:45:01,750 | INFO     | [monitor] control thread has ended
[2024-06-22 09:45:07] 2024-06-22 07:45:05,857 | INFO     | all workflow threads have been joined
[2024-06-22 09:45:07] 2024-06-22 07:45:05,858 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 09:45:07] 2024-06-22 07:45:05,858 | INFO     | traces error code: 0
[2024-06-22 09:45:07] 2024-06-22 07:45:05,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 09:45:07] 2024-06-22 07:45:05,975 [wrapper] ==== pilot stdout END ====
[2024-06-22 09:45:07] 2024-06-22 07:45:05,982 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 09:45:07] 2024-06-22 07:45:06,002 [wrapper] pilotpid: 2790998
[2024-06-22 09:45:07] 2024-06-22 07:45:06,019 [wrapper] Pilot exit status: 0
[2024-06-22 09:45:07] 2024-06-22 07:45:06,047 [wrapper] pandaids: 6239015183
[2024-06-22 09:45:07] 2024-06-22 07:45:06,149 [wrapper] cleanup supervisor_pilot 3883741 2790999
[2024-06-22 09:45:07] 2024-06-22 07:45:06,168 [wrapper] Test setup, not cleaning
[2024-06-22 09:45:07] 2024-06-22 07:45:06,170 [wrapper] ==== wrapper stdout END ====
[2024-06-22 09:45:07] 2024-06-22 07:45:06,176 [wrapper] ==== wrapper stderr END ====
[2024-06-22 09:45:07] 2024-06-22 07:45:06,184 [wrapper] apfmon messages muted
[2024-06-22 09:45:07]  *** Error codes and diagnostics ***
[2024-06-22 09:45:07]     "exeErrorCode": 0,
[2024-06-22 09:45:07]     "exeErrorDiag": "",
[2024-06-22 09:45:07]     "pilotErrorCode": 0,
[2024-06-22 09:45:07]     "pilotErrorDiag": "",
[2024-06-22 09:45:07]  *** Listing of results directory ***
[2024-06-22 09:45:07] total 838556
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc    469766 Jun 20 20:32 pilot3.tar.gz
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc      5654 Jun 20 20:52 queuedata.json
[2024-06-22 09:45:07] -rwx------ 1 boinc boinc     32308 Jun 20 20:53 runpilot2-wrapper.sh
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc       100 Jun 22 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 09:45:07] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 05:42 run_atlas
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc       105 Jun 22 05:42 job.xml
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc      6642 Jun 22 05:43 init_data.xml
[2024-06-22 09:45:07] -rw-r--r-- 2 boinc boinc 596909884 Jun 22 05:43 EVNT.40024012._000009.pool.root.1
[2024-06-22 09:45:07] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:43 start_atlas.sh
[2024-06-22 09:45:07] drwxrwx--x 2 boinc boinc      4096 Jun 22 05:43 shared
[2024-06-22 09:45:07] -rw-r--r-- 2 boinc boinc    482483 Jun 22 05:43 input.tar.gz
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc         0 Jun 22 05:43 boinc_lockfile
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc      2516 Jun 22 05:43 pandaJob.out
[2024-06-22 09:45:07] -rw------- 1 boinc boinc       424 Jun 22 05:43 setup.sh.local
[2024-06-22 09:45:07] -rw------- 1 boinc boinc   1025953 Jun 22 05:43 agis_schedconf.cvmfs.json
[2024-06-22 09:45:07] -rw------- 1 boinc boinc   1321363 Jun 22 05:43 cric_ddmendpoints.json
[2024-06-22 09:45:07] drwx------ 4 boinc boinc      4096 Jun 22 05:43 pilot3
[2024-06-22 09:45:07] -rw------- 1 boinc boinc 254650736 Jun 22 09:44 HITS.40024014._000218.pool.root.1
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc       532 Jun 22 09:44 boinc_task_state.xml
[2024-06-22 09:45:07] -rw------- 1 boinc boinc        95 Jun 22 09:44 pilot_heartbeat.json
[2024-06-22 09:45:07] -rw------- 1 boinc boinc      1040 Jun 22 09:44 memory_monitor_summary.json
[2024-06-22 09:45:07] -rw------- 1 boinc boinc         0 Jun 22 09:44 agis_ddmendpoints.agis.ALL.json
[2024-06-22 09:45:07] -rw------- 1 boinc boinc    348919 Jun 22 09:44 log.40024014._000218.job.log.tgz.1
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc      8192 Jun 22 09:44 boinc_mmap_file
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc        28 Jun 22 09:44 wrapper_checkpoint.txt
[2024-06-22 09:45:07] -rw------- 1 boinc boinc      7707 Jun 22 09:44 heartbeat.json
[2024-06-22 09:45:07] -rw------- 1 boinc boinc      4408 Jun 22 09:45 pilotlog.txt
[2024-06-22 09:45:07] -rw------- 1 boinc boinc   1439290 Jun 22 09:45 log.40024014._000218.job.log.1
[2024-06-22 09:45:07] -rw------- 1 boinc boinc       357 Jun 22 09:45 output.list
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc       620 Jun 22 09:45 runtime_log
[2024-06-22 09:45:07] -rw------- 1 boinc boinc   1812480 Jun 22 09:45 result.tar.gz
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc     11410 Jun 22 09:45 runtime_log.err
[2024-06-22 09:45:07] -rw------- 1 boinc boinc       658 Jun 22 09:45 HfZMDmY5be5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmNolKDmgqgYIm.diag
[2024-06-22 09:45:07] -rw-r--r-- 1 boinc boinc     21400 Jun 22 09:45 stderr.txt
[2024-06-22 09:45:07] HITS file was successfully produced:
[2024-06-22 09:45:07] -rw------- 1 boinc boinc 254650736 Jun 22 09:44 shared/HITS.pool.root.1
[2024-06-22 09:45:07]  *** Contents of shared directory: ***
[2024-06-22 09:45:07] total 833876
[2024-06-22 09:45:07] -rw-r--r-- 2 boinc boinc 596909884 Jun 22 05:43 ATLAS.root_0
[2024-06-22 09:45:07] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:43 start_atlas.sh
[2024-06-22 09:45:07] -rw-r--r-- 2 boinc boinc    482483 Jun 22 05:43 input.tar.gz
[2024-06-22 09:45:07] -rw------- 1 boinc boinc 254650736 Jun 22 09:44 HITS.pool.root.1
[2024-06-22 09:45:07] -rw------- 1 boinc boinc   1812480 Jun 22 09:45 result.tar.gz
09:45:08 (2777379): run_atlas exited; CPU time 54463.975529
09:45:08 (2777379): called boinc_finish(0)

</stderr_txt>
]]>

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