Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:07:10 (21323): wrapper (7.7.26015): starting
01:07:10 (21323): wrapper: running run_atlas (--nthreads 12)
[2024-06-21 01:07:10] Arguments: --nthreads 12
[2024-06-21 01:07:10] Threads: 12
[2024-06-21 01:07:10] Checking for CVMFS
[2024-06-21 01:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 01:07:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 01:07:10] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 01:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 01:07:10] 2.9.2.0 255486 233616 109388 134117 0 64 23505770 45568000 4397 130560 0 1380785503 99.798 836294604 19708 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-21 01:07:10] CVMFS is ok
[2024-06-21 01:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 01:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 01:07:10] Further information can be found at the LHC@home message board.
[2024-06-21 01:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 01:07:10] Checking for apptainer binary...
[2024-06-21 01:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 01:07:10] Running /usr/bin/apptainer --version
[2024-06-21 01:07:10] apptainer version 1.3.2-1.el7
[2024-06-21 01:07:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 01:07:11] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0029.triumf.lcg
[2024-06-21 01:07:11] apptainer works
[2024-06-21 01:07:11] Set ATHENA_PROC_NUMBER=12
[2024-06-21 01:07:11] Set ATHENA_CORE_NUMBER=12
[2024-06-21 01:07:11] Starting ATLAS job with PandaID=6238977848
[2024-06-21 01:07:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 02:14:57]  *** The last 200 lines of the pilot log: ***
[2024-06-21 02:14:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-21 02:14:57]  is_tar=False
[2024-06-21 02:14:57]  lfn=log.40024031._000530.job.log.tgz.1
[2024-06-21 02:14:57]  mtime=0
[2024-06-21 02:14:57]  protocol_id=None
[2024-06-21 02:14:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-21 02:14:57]  replicas=None
[2024-06-21 02:14:57]  scope=mc23_13p6TeV
[2024-06-21 02:14:57]  status=None
[2024-06-21 02:14:57]  status_code=0
[2024-06-21 02:14:57]  storage_token=
[2024-06-21 02:14:57]  surl=/home/boinc/slots/0/PanDA_Pilot-6238977848/log.40024031._000530.job.log.tgz.1
[2024-06-21 02:14:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/b1/log.40024031._000530.job.log.tgz.1
[2024-06-21 02:14:57]  workdir=None
[2024-06-21 02:14:57] ]
[2024-06-21 02:14:57] 2024-06-21 09:14:25,486 | INFO     | transferring file log.40024031._000530.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6238977848/log.40024031._000530.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-21 02:14:57] 2024-06-21 09:14:25,486 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6238977848/log.40024031._000530.job.log.tgz.1 /home/boinc/slots/0/log.40024031._000530.job.log.t
[2024-06-21 02:14:57] 2024-06-21 09:14:25,522 | INFO     | adding to output.list: log.40024031._000530.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/b1/log.40024031._000530.job.log.tg
[2024-06-21 02:14:57] 2024-06-21 09:14:25,523 | INFO     | summary of transferred files:
[2024-06-21 02:14:57] 2024-06-21 09:14:25,523 | INFO     |  -- lfn=log.40024031._000530.job.log.tgz.1, status_code=0, status=transferred
[2024-06-21 02:14:57] 2024-06-21 09:14:25,524 | INFO     | stage-out finished correctly
[2024-06-21 02:14:57] 2024-06-21 09:14:25,586 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-21 02:14:57] 2024-06-21 09:14:26,474 | INFO     | job 6238977848 has state=finished
[2024-06-21 02:14:57] 2024-06-21 09:14:26,475 | INFO     | preparing for final server update for job 6238977848 in state='finished'
[2024-06-21 02:14:57] 2024-06-21 09:14:26,476 | INFO     | this job has now completed (state=finished)
[2024-06-21 02:14:57] 2024-06-21 09:14:26,476 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-21 02:14:57] 2024-06-21 09:14:26,476 | INFO     | job 6238977848 has finished - writing final server update
[2024-06-21 02:14:57] 2024-06-21 09:14:26,477 | INFO     | total number of processed events: 400 (read)
[2024-06-21 02:14:57] 2024-06-21 09:14:26,483 | INFO     | executing command: lscpu
[2024-06-21 02:14:57] 2024-06-21 09:14:26,566 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-21 02:14:57] 2024-06-21 09:14:26,566 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-21 02:14:57] 2024-06-21 09:14:26,653 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-21 02:14:57] 2024-06-21 09:14:27,907 | INFO     | monitor loop #319: job 0:6238977848 is in state 'finished'
[2024-06-21 02:14:57] 2024-06-21 09:14:27,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 02:14:57] 2024-06-21 09:14:30,411 | INFO     | monitor loop #320: job 0:6238977848 is in state 'finished'
[2024-06-21 02:14:57] 2024-06-21 09:14:30,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 02:14:57] 2024-06-21 09:14:32,916 | INFO     | monitor loop #321: job 0:6238977848 is in state 'finished'
[2024-06-21 02:14:57] 2024-06-21 09:14:32,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 02:14:57] 2024-06-21 09:14:35,422 | INFO     | monitor loop #322: job 0:6238977848 is in state 'finished'
[2024-06-21 02:14:57] 2024-06-21 09:14:35,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 02:14:57] 2024-06-21 09:14:36,228 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-21 02:14:57] 2024-06-21 09:14:36,229 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6238977848/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 02:14:57] 2024-06-21 09:14:36,231 | INFO     | extracted standard info from prmon json
[2024-06-21 02:14:57] 2024-06-21 09:14:36,231 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 02:14:57] 2024-06-21 09:14:36,232 | WARNING  | GPU info not found in prmon json
[2024-06-21 02:14:57] 2024-06-21 09:14:36,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 02:14:57] 2024-06-21 09:14:36,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 02:14:57] 2024-06-21 09:14:36,236 | INFO     | fitting pss+swap vs Time
[2024-06-21 02:14:57] 2024-06-21 09:14:36,237 | INFO     | model: linear, x: [1718957580.0, 1718957641.0, 1718957702.0, 1718957763.0, 1718957824.0, 1718957885.0, 1718957946.0, 1718958007.0, 1718958068.0, 1718958129.0, 1718
[2024-06-21 02:14:57] 2024-06-21 09:14:36,237 | INFO     | sum of square deviations: 63666310.0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,238 | INFO     | sum of deviations: 21100384645.000004
[2024-06-21 02:14:57] 2024-06-21 09:14:36,238 | INFO     | mean x: 1718959349.0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,238 | INFO     | mean y: 2599324.9322033897
[2024-06-21 02:14:57] 2024-06-21 09:14:36,238 | INFO     | -- intersect: -569697505063.3824
[2024-06-21 02:14:57] 2024-06-21 09:14:36,238 | INFO     | intersect: -569697505063.3824
[2024-06-21 02:14:57] 2024-06-21 09:14:36,238 | INFO     | chi2: 1.8519321131382118
[2024-06-21 02:14:57] 2024-06-21 09:14:36,239 | INFO     | -- intersect: -569697505063.3824
[2024-06-21 02:14:57] 2024-06-21 09:14:36,239 | INFO     | current memory leak: 331.42 B/s (using 59 data points, chi2=1.85)
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | ..............................
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . Timing measurements:
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . get job = 0 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . initial setup = 2 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . payload setup = 7 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . stage-in = 0 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . payload execution = 3990 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . stage-out = 0 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,240 | INFO     | . log creation = 0 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,241 | INFO     | ..............................
[2024-06-21 02:14:57] 2024-06-21 09:14:36,835 | INFO     | 
[2024-06-21 02:14:57] 2024-06-21 09:14:36,835 | INFO     | job summary report
[2024-06-21 02:14:57] 2024-06-21 09:14:36,835 | INFO     | --------------------------------------------------
[2024-06-21 02:14:57] 2024-06-21 09:14:36,835 | INFO     | PanDA job id: 6238977848
[2024-06-21 02:14:57] 2024-06-21 09:14:36,835 | INFO     | task id: 40024031
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | errors: (none)
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | pilot state: finished 
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | transexitcode: 0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | exeerrorcode: 0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | exeerrordiag: 
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | exitcode: 0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,836 | INFO     | exitmsg: OK
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | cpuconsumptiontime: 36558 s
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | nevents: 400
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | neventsw: 0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | pid: 31897
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | pgrp: 31897
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | corecount: 12
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | event service: False
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | sizes: {0: 2386901, 6: 2387107, 11: 2387135, 4001: 2412882, 4003: 2421892, 4014: 2422006}
[2024-06-21 02:14:57] 2024-06-21 09:14:36,837 | INFO     | --------------------------------------------------
[2024-06-21 02:14:57] 2024-06-21 09:14:36,838 | INFO     | 
[2024-06-21 02:14:57] 2024-06-21 09:14:36,838 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 02:14:57] 2024-06-21 09:14:36,888 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,891 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 02:14:57] 2024-06-21 09:14:36,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,891 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 02:14:57] 2024-06-21 09:14:36,891 | INFO     | job 6238977848 has completed (purged errors)
[2024-06-21 02:14:57] 2024-06-21 09:14:36,892 | INFO     | overall cleanup function is called
[2024-06-21 02:14:57] 2024-06-21 09:14:37,902 | INFO     | --- collectZombieJob: --- 10, [31897]
[2024-06-21 02:14:57] 2024-06-21 09:14:37,902 | INFO     | zombie collector waiting for pid 31897
[2024-06-21 02:14:57] 2024-06-21 09:14:37,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 02:14:57] 2024-06-21 09:14:38,908 | INFO     | collected zombie processes
[2024-06-21 02:14:57] 2024-06-21 09:14:38,908 | INFO     | will now attempt to kill all subprocesses of pid=31897
[2024-06-21 02:14:57] 2024-06-21 09:14:39,046 | INFO     | process IDs to be killed: [31897] (in reverse order)
[2024-06-21 02:14:57] 2024-06-21 09:14:39,164 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 02:14:57] 2024-06-21 09:14:39,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 02:14:57] 2024-06-21 09:14:39,173 | INFO     | did not find any defunct processes belonging to 31897
[2024-06-21 02:14:57] 2024-06-21 09:14:39,180 | INFO     | did not find any defunct processes belonging to 31897
[2024-06-21 02:14:57] 2024-06-21 09:14:39,180 | INFO     | ready for new job
[2024-06-21 02:14:57] 2024-06-21 09:14:39,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 02:14:57] 2024-06-21 09:14:39,183 | INFO     | *************************************
[2024-06-21 02:14:57] 2024-06-21 09:14:39,183 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 02:14:57] 2024-06-21 09:14:39,183 | INFO     | *************************************
[2024-06-21 02:14:57] 2024-06-21 09:14:39,184 | INFO     | 
[2024-06-21 02:14:57] 2024-06-21 09:14:39,189 | INFO     | architecture information:
[2024-06-21 02:14:57] 2024-06-21 09:14:39,189 | INFO     | executing command: cat /etc/os-release
[2024-06-21 02:14:57] 2024-06-21 09:14:39,227 | INFO     | cat /etc/os-release:
[2024-06-21 02:14:57] NAME="CentOS Linux"
[2024-06-21 02:14:57] VERSION="7 (Core)"
[2024-06-21 02:14:57] ID="centos"
[2024-06-21 02:14:57] ID_LIKE="rhel fedora"
[2024-06-21 02:14:57] VERSION_ID="7"
[2024-06-21 02:14:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 02:14:57] ANSI_COLOR="0;31"
[2024-06-21 02:14:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 02:14:57] HOME_URL="https://www.centos.org/"
[2024-06-21 02:14:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 02:14:57] 
[2024-06-21 02:14:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 02:14:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 02:14:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 02:14:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 02:14:57] 
[2024-06-21 02:14:57] 2024-06-21 09:14:39,227 | INFO     | *************************************
[2024-06-21 02:14:57] 2024-06-21 09:14:39,731 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 02:14:57] 2024-06-21 09:14:39,773 | INFO     | sufficient remaining disk space (2037809938432 B)
[2024-06-21 02:14:57] 2024-06-21 09:14:39,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 02:14:57] 2024-06-21 09:14:39,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 02:14:57] 2024-06-21 09:14:39,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:14:57] 2024-06-21 09:14:39,774 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 02:14:57] 2024-06-21 09:14:39,775 | INFO     | aborting loop
[2024-06-21 02:14:57] 2024-06-21 09:14:39,775 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 02:14:57] 2024-06-21 09:14:39,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 02:14:57] 2024-06-21 09:14:39,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 02:14:57] 2024-06-21 09:14:40,111 | INFO     | all payload control threads have been joined
[2024-06-21 02:14:57] 2024-06-21 09:14:40,295 | INFO     | all data control threads have been joined
[2024-06-21 02:14:57] 2024-06-21 09:14:40,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 02:14:57] 2024-06-21 09:14:40,780 | INFO     | [job] retrieve thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:40,782 | INFO     | [job] job monitor thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:40,931 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,044 | INFO     | [payload] failed_post thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 02:14:57] 2024-06-21 09:14:41,117 | INFO     | [payload] control thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,181 | INFO     | [job] validate thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,270 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,302 | INFO     | [data] control thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,315 | INFO     | all job control threads have been joined
[2024-06-21 02:14:57] 2024-06-21 09:14:41,341 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:41,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:14:57] 2024-06-21 09:14:41,522 | INFO     | [data] copytool_in thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:42,116 | INFO     | [payload] validate_post thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:42,321 | INFO     | [job] control thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:42,355 | INFO     | [job] queue monitor thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:43,105 | INFO     | [data] copytool_out thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:44,705 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:50,222 | INFO     | job.realtimelogging is not enabled
[2024-06-21 02:14:57] 2024-06-21 09:14:51,228 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 02:14:57] 2024-06-21 09:14:51,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335831787328)>', '<ExcThread(monitor, started 140335405577984)>']
[2024-06-21 02:14:57] 2024-06-21 09:14:51,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 02:14:57] 2024-06-21 09:14:51,837 | INFO     | [monitor] control thread has ended
[2024-06-21 02:14:57] 2024-06-21 09:14:56,568 | INFO     | all workflow threads have been joined
[2024-06-21 02:14:57] 2024-06-21 09:14:56,568 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 02:14:57] 2024-06-21 09:14:56,569 | INFO     | traces error code: 0
[2024-06-21 02:14:57] 2024-06-21 09:14:56,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 02:14:57] 2024-06-21 09:14:56,699 [wrapper] ==== pilot stdout END ====
[2024-06-21 02:14:57] 2024-06-21 09:14:56,708 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 02:14:57] 2024-06-21 09:14:56,716 [wrapper] pilotpid: 25497
[2024-06-21 02:14:57] 2024-06-21 09:14:56,725 [wrapper] Pilot exit status: 0
[2024-06-21 02:14:57] 2024-06-21 09:14:56,750 [wrapper] pandaids: 6238977848
[2024-06-21 02:14:57] 2024-06-21 09:14:56,823 [wrapper] cleanup supervisor_pilot  77813 25498
[2024-06-21 02:14:57] 2024-06-21 09:14:56,832 [wrapper] Test setup, not cleaning
[2024-06-21 02:14:57] 2024-06-21 09:14:56,841 [wrapper] ==== wrapper stdout END ====
[2024-06-21 02:14:57] 2024-06-21 09:14:56,851 [wrapper] ==== wrapper stderr END ====
[2024-06-21 02:14:57] 2024-06-21 09:14:56,868 [wrapper] apfmon messages muted
[2024-06-21 02:14:57]  *** Error codes and diagnostics ***
[2024-06-21 02:14:57]     "exeErrorCode": 0,
[2024-06-21 02:14:57]     "exeErrorDiag": "",
[2024-06-21 02:14:57]     "pilotErrorCode": 0,
[2024-06-21 02:14:57]     "pilotErrorDiag": "",
[2024-06-21 02:14:57]  *** Listing of results directory ***
[2024-06-21 02:14:57] total 830604
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc    469766 Jun 20 10:30 pilot3.tar.gz
[2024-06-21 02:14:57] -rwx------ 1 boinc boinc     32308 Jun 20 11:00 runpilot2-wrapper.sh
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc      5654 Jun 20 11:00 queuedata.json
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc       100 Jun 21 01:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 02:14:57] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 01:07 run_atlas
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc       105 Jun 21 01:07 job.xml
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc      6628 Jun 21 01:07 init_data.xml
[2024-06-21 02:14:57] -rw-r--r-- 2 boinc boinc 592105485 Jun 21 01:07 EVNT.40024029._000024.pool.root.1
[2024-06-21 02:14:57] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:07 start_atlas.sh
[2024-06-21 02:14:57] drwxrwx--x 2 boinc boinc      4096 Jun 21 01:07 shared
[2024-06-21 02:14:57] -rw-r--r-- 2 boinc boinc    482517 Jun 21 01:07 input.tar.gz
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc         0 Jun 21 01:07 boinc_lockfile
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc      2577 Jun 21 01:07 pandaJob.out
[2024-06-21 02:14:57] -rw------- 1 boinc boinc       424 Jun 21 01:07 setup.sh.local
[2024-06-21 02:14:57] -rw------- 1 boinc boinc   1023442 Jun 21 01:07 agis_schedconf.cvmfs.json
[2024-06-21 02:14:57] -rw------- 1 boinc boinc         0 Jun 21 01:07 agis_ddmendpoints.agis.ALL.json
[2024-06-21 02:14:57] -rw------- 1 boinc boinc   1321251 Jun 21 01:07 cric_ddmendpoints.json
[2024-06-21 02:14:57] drwx------ 4 boinc boinc      4096 Jun 21 01:07 pilot3
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc       530 Jun 21 02:13 boinc_task_state.xml
[2024-06-21 02:14:57] -rw------- 1 boinc boinc 253423018 Jun 21 02:13 HITS.40024031._000530.pool.root.1
[2024-06-21 02:14:57] -rw------- 1 boinc boinc      1064 Jun 21 02:14 memory_monitor_summary.json
[2024-06-21 02:14:57] -rw------- 1 boinc boinc    349282 Jun 21 02:14 log.40024031._000530.job.log.tgz.1
[2024-06-21 02:14:57] -rw------- 1 boinc boinc        95 Jun 21 02:14 pilot_heartbeat.json
[2024-06-21 02:14:57] -rw------- 1 boinc boinc      7762 Jun 21 02:14 heartbeat.json
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc        27 Jun 21 02:14 wrapper_checkpoint.txt
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc      8192 Jun 21 02:14 boinc_mmap_file
[2024-06-21 02:14:57] -rw------- 1 boinc boinc      4405 Jun 21 02:14 pilotlog.txt
[2024-06-21 02:14:57] -rw------- 1 boinc boinc    387356 Jun 21 02:14 log.40024031._000530.job.log.1
[2024-06-21 02:14:57] -rw------- 1 boinc boinc       357 Jun 21 02:14 output.list
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc       620 Jun 21 02:14 runtime_log
[2024-06-21 02:14:57] -rw------- 1 boinc boinc    757760 Jun 21 02:14 result.tar.gz
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc     11286 Jun 21 02:14 runtime_log.err
[2024-06-21 02:14:57] -rw------- 1 boinc boinc       656 Jun 21 02:14 RGuLDmPGbe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm9XXKDmQBLAcn.diag
[2024-06-21 02:14:57] -rw-r--r-- 1 boinc boinc     21835 Jun 21 02:14 stderr.txt
[2024-06-21 02:14:57] HITS file was successfully produced:
[2024-06-21 02:14:57] -rw------- 1 boinc boinc 253423018 Jun 21 02:13 shared/HITS.pool.root.1
[2024-06-21 02:14:57]  *** Contents of shared directory: ***
[2024-06-21 02:14:57] total 826956
[2024-06-21 02:14:57] -rw-r--r-- 2 boinc boinc 592105485 Jun 21 01:07 ATLAS.root_0
[2024-06-21 02:14:57] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:07 start_atlas.sh
[2024-06-21 02:14:57] -rw-r--r-- 2 boinc boinc    482517 Jun 21 01:07 input.tar.gz
[2024-06-21 02:14:57] -rw------- 1 boinc boinc 253423018 Jun 21 02:13 HITS.pool.root.1
[2024-06-21 02:14:57] -rw------- 1 boinc boinc    757760 Jun 21 02:14 result.tar.gz
02:14:59 (21323): run_atlas exited; CPU time 36374.705433
02:14:59 (21323): called boinc_finish(0)

</stderr_txt>
]]>

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