Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:03:27 (3417034): wrapper (7.7.26015): starting
05:03:27 (3417034): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 05:03:27] Arguments: --nthreads 4
[2024-06-22 05:03:27] Threads: 4
[2024-06-22 05:03:27] Checking for CVMFS
[2024-06-22 05:03:27] No cvmfs_config command found, will try listing directly
[2024-06-22 05:03:27] CVMFS is ok
[2024-06-22 05:03:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 05:03:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 05:03:27] Further information can be found at the LHC@home message board.
[2024-06-22 05:03:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 05:03:27] Checking for apptainer binary...
[2024-06-22 05:03:27] which: no apptainer in ((null))
[2024-06-22 05:03:27] apptainer is not installed, using version from CVMFS
[2024-06-22 05:03:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 05:03:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-06-22 05:03:28] apptainer works
[2024-06-22 05:03:28] Set ATHENA_PROC_NUMBER=4
[2024-06-22 05:03:28] Set ATHENA_CORE_NUMBER=4
[2024-06-22 05:03:29] Starting ATLAS job with PandaID=6238977775
[2024-06-22 05:03:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 08:38:21]  *** The last 200 lines of the pilot log: ***
[2024-06-22 08:38:21] 2024-06-22 06:37:58,853 | INFO     | model: linear, x: [1719026377.0, 1719026438.0, 1719026499.0, 1719026560.0, 1719026621.0, 1719026682.0, 1719026743.0, 1719026804.0, 1719026865.0, 1719026926.0, 1719
[2024-06-22 08:38:21] 2024-06-22 06:37:58,853 | INFO     | sum of square deviations: 2299168690.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,854 | INFO     | sum of deviations: 4462277978.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | mean x: 1719032294.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | mean y: 2371182.4512820514
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | -- intersect: -3333965112.641107
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | intersect: -3333965112.641107
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | chi2: 0.0008940011360291629
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | current chi2=0.0008940011360291629 (change=98.09361907816911 %)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,855 | INFO     | model: linear, x: [1719026682.0, 1719026743.0, 1719026804.0, 1719026865.0, 1719026926.0, 1719026987.0, 1719027048.0, 1719027109.0, 1719027170.0, 1719027231.0, 1719
[2024-06-22 08:38:21] 2024-06-22 06:37:58,856 | INFO     | sum of square deviations: 2126802667.5
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | sum of deviations: 3424981060.5000005
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | mean x: 1719032446.5
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | mean y: 2372099.984210526
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | -- intersect: -2765940006.07886
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | intersect: -2765940006.07886
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | chi2: 0.00032976262659909053
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | current chi2=0.00032976262659909053 (change=63.11384702889982 %)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,857 | INFO     | model: linear, x: [1719026987.0, 1719027048.0, 1719027109.0, 1719027170.0, 1719027231.0, 1719027292.0, 1719027353.0, 1719027414.0, 1719027475.0, 1719027536.0, 1719
[2024-06-22 08:38:21] 2024-06-22 06:37:58,858 | INFO     | sum of square deviations: 1963274020.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | sum of deviations: 2763978624.999997
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | mean x: 1719032599.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | mean y: 2372714.5675675673
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | -- intersect: -2417752703.9484844
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | intersect: -2417752703.9484844
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | chi2: 0.00011957982895690423
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | current chi2=0.00011957982895690423 (change=63.73760416995841 %)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,859 | INFO     | model: linear, x: [1719027292.0, 1719027353.0, 1719027414.0, 1719027475.0, 1719027536.0, 1719027597.0, 1719027658.0, 1719027719.0, 1719027780.0, 1719027841.0, 1719
[2024-06-22 08:38:21] 2024-06-22 06:37:58,860 | INFO     | sum of square deviations: 1808350185.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,860 | INFO     | sum of deviations: 2374492496.5000005
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | mean x: 1719032751.5
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | mean y: 2373097.572222222
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | -- intersect: -2254839251.856934
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | intersect: -2254839251.856934
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | chi2: 8.162715319710363e-05
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | current chi2=8.162715319710363e-05 (change=31.73835929592983 %)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,861 | INFO     | model: linear, x: [1719027597.0, 1719027658.0, 1719027719.0, 1719027780.0, 1719027841.0, 1719027902.0, 1719027963.0, 1719028024.0, 1719028085.0, 1719028146.0, 1719
[2024-06-22 08:38:21] 2024-06-22 06:37:58,862 | INFO     | sum of square deviations: 1661798600.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,862 | INFO     | sum of deviations: 2113434243.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | mean x: 1719032904.0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | mean y: 2373367.977142857
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | -- intersect: -2183850043.305868
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | intersect: -2183850043.305868
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | chi2: 6.74454189616872e-05
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | current chi2=6.74454189616872e-05 (change=17.37379496890213 %)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | left removable region: 70
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | model: linear, x: [1719029732.0, 1719029793.0, 1719029854.0, 1719029915.0, 1719029976.0, 1719030037.0, 1719030098.0, 1719030159.0, 1719030220.0, 1719030281.0, 1719
[2024-06-22 08:38:21] 2024-06-22 06:37:58,863 | INFO     | sum of square deviations: 746051197.5
[2024-06-22 08:38:21] 2024-06-22 06:37:58,864 | INFO     | sum of deviations: 856459062.5
[2024-06-22 08:38:21] 2024-06-22 06:37:58,864 | INFO     | mean x: 1719033788.5
[2024-06-22 08:38:21] 2024-06-22 06:37:58,864 | INFO     | mean y: 2374759.156716418
[2024-06-22 08:38:21] 2024-06-22 06:37:58,864 | INFO     | -- intersect: -1971058259.70059
[2024-06-22 08:38:21] 2024-06-22 06:37:58,864 | INFO     | intersect: -1971058259.70059
[2024-06-22 08:38:21] 2024-06-22 06:37:58,865 | INFO     | chi2: 3.0194342682072683e-05
[2024-06-22 08:38:21] 2024-06-22 06:37:58,865 | INFO     | -- intersect: -1971058259.70059
[2024-06-22 08:38:21] 2024-06-22 06:37:58,865 | INFO     | current memory leak: 1.15 B/s (using 134 data points, chi2=0.00)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | ..............................
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . Timing measurements:
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . get job = 0 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . initial setup = 1 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . payload setup = 9 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . stage-in = 0 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . payload execution = 12808 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . stage-out = 0 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | . log creation = 0 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,866 | INFO     | ..............................
[2024-06-22 08:38:21] 2024-06-22 06:37:58,956 | INFO     | 
[2024-06-22 08:38:21] 2024-06-22 06:37:58,956 | INFO     | job summary report
[2024-06-22 08:38:21] 2024-06-22 06:37:58,956 | INFO     | --------------------------------------------------
[2024-06-22 08:38:21] 2024-06-22 06:37:58,956 | INFO     | PanDA job id: 6238977775
[2024-06-22 08:38:21] 2024-06-22 06:37:58,956 | INFO     | task id: 40024031
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | errors: (none)
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | pilot state: finished 
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | transexitcode: 0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | exeerrorcode: 0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | exeerrordiag: 
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | exitcode: 0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | exitmsg: OK
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | cpuconsumptiontime: 47844 s
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | nevents: 400
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | neventsw: 0
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | pid: 3431731
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | pgrp: 3431731
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | corecount: 4
[2024-06-22 08:38:21] 2024-06-22 06:37:58,957 | INFO     | event service: False
[2024-06-22 08:38:21] 2024-06-22 06:37:58,958 | INFO     | sizes: {0: 2386706, 1: 2386905, 9: 2387111, 11: 2387139, 12821: 2416816, 12822: 2425982, 12834: 2426096}
[2024-06-22 08:38:21] 2024-06-22 06:37:58,958 | INFO     | --------------------------------------------------
[2024-06-22 08:38:21] 2024-06-22 06:37:58,958 | INFO     | 
[2024-06-22 08:38:21] 2024-06-22 06:37:58,958 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-06-22 08:38:21] 2024-06-22 06:37:59,090 | WARNING  | process 3431731 is no longer using CPU - aborting
[2024-06-22 08:38:21] 2024-06-22 06:37:59,091 | INFO     | aborting job monitoring since job object (job id=6238977775) has expired
[2024-06-22 08:38:21] 2024-06-22 06:37:59,105 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,105 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,107 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 08:38:21] 2024-06-22 06:37:59,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,107 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 08:38:21] 2024-06-22 06:37:59,107 | INFO     | job 6238977775 has completed (purged errors)
[2024-06-22 08:38:21] 2024-06-22 06:37:59,107 | INFO     | overall cleanup function is called
[2024-06-22 08:38:21] 2024-06-22 06:38:00,114 | INFO     | --- collectZombieJob: --- 10, [3431731]
[2024-06-22 08:38:21] 2024-06-22 06:38:00,114 | INFO     | zombie collector waiting for pid 3431731
[2024-06-22 08:38:21] 2024-06-22 06:38:00,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 08:38:21] 2024-06-22 06:38:01,119 | INFO     | collected zombie processes
[2024-06-22 08:38:21] 2024-06-22 06:38:01,119 | INFO     | will now attempt to kill all subprocesses of pid=3431731
[2024-06-22 08:38:21] 2024-06-22 06:38:01,374 | INFO     | process IDs to be killed: [3431731] (in reverse order)
[2024-06-22 08:38:21] 2024-06-22 06:38:01,582 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 08:38:21] 2024-06-22 06:38:01,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 08:38:21] 2024-06-22 06:38:01,599 | INFO     | did not find any defunct processes belonging to 3431731
[2024-06-22 08:38:21] 2024-06-22 06:38:01,612 | INFO     | did not find any defunct processes belonging to 3431731
[2024-06-22 08:38:21] 2024-06-22 06:38:01,612 | INFO     | ready for new job
[2024-06-22 08:38:21] 2024-06-22 06:38:01,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 08:38:21] 2024-06-22 06:38:01,615 | INFO     | *************************************
[2024-06-22 08:38:21] 2024-06-22 06:38:01,615 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 08:38:21] 2024-06-22 06:38:01,615 | INFO     | *************************************
[2024-06-22 08:38:21] 2024-06-22 06:38:01,615 | INFO     | 
[2024-06-22 08:38:21] 2024-06-22 06:38:01,622 | INFO     | architecture information:
[2024-06-22 08:38:21] 2024-06-22 06:38:01,623 | INFO     | executing command: cat /etc/os-release
[2024-06-22 08:38:21] 2024-06-22 06:38:01,661 | INFO     | cat /etc/os-release:
[2024-06-22 08:38:21] NAME="CentOS Linux"
[2024-06-22 08:38:21] VERSION="7 (Core)"
[2024-06-22 08:38:21] ID="centos"
[2024-06-22 08:38:21] ID_LIKE="rhel fedora"
[2024-06-22 08:38:21] VERSION_ID="7"
[2024-06-22 08:38:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 08:38:21] ANSI_COLOR="0;31"
[2024-06-22 08:38:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 08:38:21] HOME_URL="https://www.centos.org/"
[2024-06-22 08:38:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 08:38:21] 
[2024-06-22 08:38:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 08:38:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 08:38:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 08:38:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 08:38:21] 
[2024-06-22 08:38:21] 2024-06-22 06:38:01,661 | INFO     | *************************************
[2024-06-22 08:38:21] 2024-06-22 06:38:02,164 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-06-22 08:38:21] 2024-06-22 06:38:02,186 | INFO     | sufficient remaining disk space (3148915671040 B)
[2024-06-22 08:38:21] 2024-06-22 06:38:02,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 08:38:21] 2024-06-22 06:38:02,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 08:38:21] 2024-06-22 06:38:02,188 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 08:38:21] 2024-06-22 06:38:02,188 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 08:38:21] 2024-06-22 06:38:02,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 08:38:21] 2024-06-22 06:38:02,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 08:38:21] 2024-06-22 06:38:02,361 | INFO     | all job control threads have been joined
[2024-06-22 08:38:21] 2024-06-22 06:38:02,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 08:38:21] 2024-06-22 06:38:02,598 | INFO     | aborting loop
[2024-06-22 08:38:21] 2024-06-22 06:38:02,606 | INFO     | all data control threads have been joined
[2024-06-22 08:38:21] 2024-06-22 06:38:02,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 08:38:21] 2024-06-22 06:38:02,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 08:38:21] 2024-06-22 06:38:03,191 | INFO     | [job] retrieve thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,366 | INFO     | [job] control thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,435 | INFO     | [payload] failed_post thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,437 | INFO     | [payload] validate_post thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,532 | INFO     | all payload control threads have been joined
[2024-06-22 08:38:21] 2024-06-22 06:38:03,603 | INFO     | [job] job monitor thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,611 | INFO     | [data] control thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,806 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:03,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 08:38:21] 2024-06-22 06:38:03,981 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:04,082 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:04,116 | INFO     | [job] validate thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:04,469 | INFO     | [data] copytool_in thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:04,537 | INFO     | [payload] control thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:04,929 | INFO     | [data] copytool_out thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:04,970 | INFO     | [job] queue monitor thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:06,681 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:12,375 | INFO     | job.realtimelogging is not enabled
[2024-06-22 08:38:21] 2024-06-22 06:38:13,380 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 08:38:21] 2024-06-22 06:38:15,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47347215303744)>', '<ExcThread(monitor, started 47347467843328)>']
[2024-06-22 08:38:21] 2024-06-22 06:38:15,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 08:38:21] 2024-06-22 06:38:15,253 | INFO     | [monitor] control thread has ended
[2024-06-22 08:38:21] 2024-06-22 06:38:20,267 | INFO     | all workflow threads have been joined
[2024-06-22 08:38:21] 2024-06-22 06:38:20,267 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 08:38:21] 2024-06-22 06:38:20,267 | INFO     | traces error code: 0
[2024-06-22 08:38:21] 2024-06-22 06:38:20,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 08:38:21] 2024-06-22 06:38:20,377 [wrapper] ==== pilot stdout END ====
[2024-06-22 08:38:21] 2024-06-22 06:38:20,380 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 08:38:21] 2024-06-22 06:38:20,382 [wrapper] pilotpid: 3421778
[2024-06-22 08:38:21] 2024-06-22 06:38:20,385 [wrapper] Pilot exit status: 0
[2024-06-22 08:38:21] 2024-06-22 06:38:20,397 [wrapper] pandaids: 6238977775
[2024-06-22 08:38:21] 2024-06-22 06:38:20,492 [wrapper] cleanup supervisor_pilot  301852 3421779
[2024-06-22 08:38:21] 2024-06-22 06:38:20,494 [wrapper] Test setup, not cleaning
[2024-06-22 08:38:21] 2024-06-22 06:38:20,496 [wrapper] ==== wrapper stdout END ====
[2024-06-22 08:38:21] 2024-06-22 06:38:20,498 [wrapper] ==== wrapper stderr END ====
[2024-06-22 08:38:21] 2024-06-22 06:38:20,501 [wrapper] apfmon messages muted
[2024-06-22 08:38:21]  *** Error codes and diagnostics ***
[2024-06-22 08:38:21]     "exeErrorCode": 0,
[2024-06-22 08:38:21]     "exeErrorDiag": "",
[2024-06-22 08:38:21]     "pilotErrorCode": 0,
[2024-06-22 08:38:21]     "pilotErrorDiag": "",
[2024-06-22 08:38:21]  *** Listing of results directory ***
[2024-06-22 08:38:21] total 840940
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc    469766 Jun 20 19:30 pilot3.tar.gz
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc      5654 Jun 20 19:44 queuedata.json
[2024-06-22 08:38:21] -rwx------ 1 boinc boinc     32308 Jun 20 19:44 runpilot2-wrapper.sh
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc       100 Jun 22 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 08:38:21] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 05:03 run_atlas
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc       105 Jun 22 05:03 job.xml
[2024-06-22 08:38:21] -rw-r--r-- 2 boinc boinc 598582764 Jun 22 05:03 EVNT.40024029._000021.pool.root.1
[2024-06-22 08:38:21] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:03 start_atlas.sh
[2024-06-22 08:38:21] drwxrwx--x 2 boinc boinc      4096 Jun 22 05:03 shared
[2024-06-22 08:38:21] -rw-r--r-- 2 boinc boinc    482514 Jun 22 05:03 input.tar.gz
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc      6642 Jun 22 05:03 init_data.xml
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc         0 Jun 22 05:03 boinc_lockfile
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc      2569 Jun 22 05:03 pandaJob.out
[2024-06-22 08:38:21] -rw------- 1 boinc boinc       424 Jun 22 05:03 setup.sh.local
[2024-06-22 08:38:21] -rw------- 1 boinc boinc   1025953 Jun 22 05:03 agis_schedconf.cvmfs.json
[2024-06-22 08:38:21] -rw------- 1 boinc boinc   1321363 Jun 22 05:03 cric_ddmendpoints.json
[2024-06-22 08:38:21] drwx------ 4 boinc boinc      4096 Jun 22 05:03 pilot3
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc       531 Jun 22 08:37 boinc_task_state.xml
[2024-06-22 08:38:21] -rw------- 1 boinc boinc 255658168 Jun 22 08:37 HITS.40024031._000458.pool.root.1
[2024-06-22 08:38:21] -rw------- 1 boinc boinc        95 Jun 22 08:37 pilot_heartbeat.json
[2024-06-22 08:38:21] -rw------- 1 boinc boinc      1040 Jun 22 08:37 memory_monitor_summary.json
[2024-06-22 08:38:21] -rw------- 1 boinc boinc         0 Jun 22 08:37 agis_ddmendpoints.agis.ALL.json
[2024-06-22 08:38:21] -rw------- 1 boinc boinc    323669 Jun 22 08:37 log.40024031._000458.job.log.tgz.1
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc      8192 Jun 22 08:37 boinc_mmap_file
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc        28 Jun 22 08:37 wrapper_checkpoint.txt
[2024-06-22 08:38:21] -rw------- 1 boinc boinc      7714 Jun 22 08:37 heartbeat.json
[2024-06-22 08:38:21] -rw------- 1 boinc boinc      4417 Jun 22 08:38 pilotlog.txt
[2024-06-22 08:38:21] -rw------- 1 boinc boinc   1344521 Jun 22 08:38 log.40024031._000458.job.log.1
[2024-06-22 08:38:21] -rw------- 1 boinc boinc       357 Jun 22 08:38 output.list
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc       620 Jun 22 08:38 runtime_log
[2024-06-22 08:38:21] -rw------- 1 boinc boinc   1689600 Jun 22 08:38 result.tar.gz
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc     11410 Jun 22 08:38 runtime_log.err
[2024-06-22 08:38:21] -rw------- 1 boinc boinc       659 Jun 22 08:38 Ye1LDmJ1ae5n7Olcko1bjSoqABFKDmABFKDmOtvXDmW3qKDmbcFcAo.diag
[2024-06-22 08:38:21] -rw-r--r-- 1 boinc boinc     21421 Jun 22 08:38 stderr.txt
[2024-06-22 08:38:21] HITS file was successfully produced:
[2024-06-22 08:38:21] -rw------- 1 boinc boinc 255658168 Jun 22 08:37 shared/HITS.pool.root.1
[2024-06-22 08:38:21]  *** Contents of shared directory: ***
[2024-06-22 08:38:21] total 836376
[2024-06-22 08:38:21] -rw-r--r-- 2 boinc boinc 598582764 Jun 22 05:03 ATLAS.root_0
[2024-06-22 08:38:21] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:03 start_atlas.sh
[2024-06-22 08:38:21] -rw-r--r-- 2 boinc boinc    482514 Jun 22 05:03 input.tar.gz
[2024-06-22 08:38:21] -rw------- 1 boinc boinc 255658168 Jun 22 08:37 HITS.pool.root.1
[2024-06-22 08:38:21] -rw------- 1 boinc boinc   1689600 Jun 22 08:38 result.tar.gz
08:38:23 (3417034): run_atlas exited; CPU time 47391.033502
08:38:23 (3417034): called boinc_finish(0)

</stderr_txt>
]]>

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