Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-27 00:45:40 (9256): Detected: vboxwrapper 26206
2024-06-27 00:45:40 (9256): Detected: BOINC client v8.0.2
2024-06-27 00:45:41 (9256): Detected: VirtualBox VboxManage Interface (Version: 7.0.4)
2024-06-27 00:45:41 (9256): Successfully copied 'init_data.xml' to the shared directory.
2024-06-27 00:45:42 (9256): Create VM. (boinc_48d196a8ed945078, slot#3)
2024-06-27 00:45:42 (9256): Setting Memory Size for VM. (4000MB)
2024-06-27 00:45:42 (9256): Setting CPU Count for VM. (7)
2024-06-27 00:45:43 (9256): Setting Chipset Options for VM.
2024-06-27 00:45:43 (9256): Setting Graphics Controller Options for VM.
2024-06-27 00:45:43 (9256): Setting Boot Options for VM.
2024-06-27 00:45:44 (9256): Setting Network Configuration for NAT.
2024-06-27 00:45:44 (9256): Enabling VM Network Access.
2024-06-27 00:45:44 (9256): Disabling USB Support for VM.
2024-06-27 00:45:45 (9256): Disabling COM Port Support for VM.
2024-06-27 00:45:45 (9256): Disabling LPT Port Support for VM.
2024-06-27 00:45:45 (9256): Disabling Audio Support for VM.
2024-06-27 00:45:45 (9256): Disabling Clipboard Support for VM.
2024-06-27 00:45:46 (9256): Disabling Drag and Drop Support for VM.
2024-06-27 00:45:46 (9256): Adding storage controller(s) to VM.
2024-06-27 00:45:46 (9256): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-27 00:45:47 (9256): Adding VirtualBox Guest Additions to VM.
2024-06-27 00:45:47 (9256): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-27 00:45:47 (9256): forwarding host port 57349 to guest port 80
2024-06-27 00:45:48 (9256): Enabling remote desktop for VM.
2024-06-27 00:45:48 (9256): Enabling shared directory for VM.
2024-06-27 00:45:49 (9256): Starting VM using VBoxManage interface. (boinc_48d196a8ed945078, slot#3)
2024-06-27 00:46:02 (9256): Successfully started VM. (PID = '9564')
2024-06-27 00:46:02 (9256): Reporting VM Process ID to BOINC.
2024-06-27 00:46:02 (9256): Guest Log: BIOS: VirtualBox 7.0.4
2024-06-27 00:46:02 (9256): Guest Log: CPUID EDX: 0x178bfbff
2024-06-27 00:46:02 (9256): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-27 00:46:02 (9256): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-27 00:46:02 (9256): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-27 00:46:02 (9256): Detected: Web Application Enabled (http://localhost:57349)
2024-06-27 00:46:02 (9256): Detected: Remote Desktop Enabled (localhost:57350)
2024-06-27 00:46:03 (9256): Preference change detected
2024-06-27 00:46:03 (9256): Setting CPU throttle for VM. (100%)
2024-06-27 00:46:03 (9256): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 30 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-27 00:46:05 (9256): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-27 00:46:05 (9256): Guest Log: BIOS: Booting from Hard Disk...
2024-06-27 00:46:09 (9256): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-27 00:46:09 (9256): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-27 00:46:09 (9256): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-27 00:46:23 (9256): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-27 00:46:23 (9256): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-27 00:46:42 (9256): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.000552 main     Log opened 2024-06-27T00:46:39.670311000Z
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.000809 main     OS Product: Linux
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.000900 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.000983 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.001074 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.001076 main     Process ID: 1330
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.001077 main     Package type: LINUX_64BITS_GENERIC
2024-06-27 00:46:42 (9256): Guest Log: 00:00:00.007479 main     5.2.32 r132073 started. Verbose level = 0
2024-06-27 00:46:42 (9256): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-27 00:46:42 (9256): Guest Log: [INFO] Mounting shared directory
2024-06-27 00:46:43 (9256): Guest Log: [INFO] Checking for init_data.xml
2024-06-27 00:46:52 (9256): Guest Log: 00:00:10.015944 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 977 573 000ns (GuestNow=1 719 445 611 704 493 000 ns GuestLast=1 719 449 199 682 066 000 ns fSetTimeLastLoop=true )
2024-06-27 00:48:35 (9256): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-27 00:48:35 (9256): Guest Log: [INFO] Detected branch: prod
2024-06-27 00:48:36 (9256): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-27 00:48:36 (9256): Guest Log: Copying input files
2024-06-27 00:48:52 (9256): Guest Log: Copied input files into RunAtlas.
2024-06-27 00:48:52 (9256): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-06-27 00:48:52 (9256): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-06-27 00:48:52 (9256): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-06-27 00:48:52 (9256): Guest Log: Further information can be found at the LHC@home message board.
2024-06-27 00:50:10 (9256): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-27 00:50:11 (9256): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-27 00:50:11 (9256): Guest Log: 2.6.3.0 1647 1 32132 134336 3 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-06-27 00:50:14 (9256): Guest Log: copied the webapp to /var/www
2024-06-27 00:50:14 (9256): Guest Log: ATHENA_PROC_NUMBER=7
2024-06-27 00:50:14 (9256): Guest Log: ATHENA_CORE_NUMBER=7
2024-06-27 00:50:16 (9256): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-27 00:50:17 (9256): Guest Log:  *** Starting ATLAS job. (PandaID=6238970504 taskID=40024040) ***
2024-06-27 02:26:14 (9256): Status Report: Elapsed Time: '6000.000000'
2024-06-27 02:26:14 (9256): Status Report: CPU Time: '24653.984375'
2024-06-27 04:06:28 (9256): Status Report: Elapsed Time: '12000.000000'
2024-06-27 04:06:28 (9256): Status Report: CPU Time: '53335.812500'
2024-06-27 05:46:39 (9256): Status Report: Elapsed Time: '18000.000000'
2024-06-27 05:46:39 (9256): Status Report: CPU Time: '82348.515625'
2024-06-27 07:26:50 (9256): Status Report: Elapsed Time: '24000.000000'
2024-06-27 07:26:50 (9256): Status Report: CPU Time: '111280.140625'
2024-06-27 09:07:01 (9256): Status Report: Elapsed Time: '30000.000000'
2024-06-27 09:07:01 (9256): Status Report: CPU Time: '140230.093750'
2024-06-27 10:47:12 (9256): Status Report: Elapsed Time: '36000.000000'
2024-06-27 10:47:12 (9256): Status Report: CPU Time: '169216.265625'
2024-06-27 12:27:24 (9256): Status Report: Elapsed Time: '42000.000000'
2024-06-27 12:27:24 (9256): Status Report: CPU Time: '198679.046875'
2024-06-27 13:41:13 (9256): Guest Log:  *** Job finished ***
2024-06-27 13:41:13 (9256): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:40:58,802 | INFO     | [payload] failed_post thread has finished
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:40:59,039 | INFO     | [job] queue monitor thread has finished
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:02,862 | INFO     | [data] queue_monitor thread has finished
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:03,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952579753792)>', '<ExcThread(monitor, started 139951601592064)>']
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:04,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:04,377 | INFO     | [monitor] control thread has ended
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:08,888 | INFO     | all workflow threads have been joined
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:08,888 | INFO     | end of generic workflow (traces error code: 0)
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:08,889 | INFO     | traces error code: 0
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:08,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,128 [wrapper] ==== pilot stdout END ====
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,152 [wrapper] ==== wrapper stdout RESUME ====
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,169 [wrapper] pilotpid: 6693
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,199 [wrapper] Pilot exit status: 0
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,347 [wrapper] pandaids: 6238970504
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,477 [wrapper] cleanup supervisor_pilot 29578 6694
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,491 [wrapper] Test setup, not cleaning
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,504 [wrapper] ==== wrapper stdout END ====
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,518 [wrapper] ==== wrapper stderr END ====
2024-06-27 13:41:13 (9256): Guest Log: 2024-06-27 12:41:09,561 [wrapper] apfmon messages muted
2024-06-27 13:41:13 (9256): Guest Log:  *** Error codes and diagnostics ***
2024-06-27 13:41:13 (9256): Guest Log:     "exeErrorCode": 0,
2024-06-27 13:41:13 (9256): Guest Log:     "exeErrorDiag": "",
2024-06-27 13:41:13 (9256): Guest Log:     "pilotErrorCode": 0,
2024-06-27 13:41:13 (9256): Guest Log:     "pilotErrorDiag": "",
2024-06-27 13:41:13 (9256): Guest Log:  *** Listing of results directory ***
2024-06-27 13:41:13 (9256): Guest Log: total 278060
2024-06-27 13:41:13 (9256): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 20 16:53 pilot3.tar.gz
2024-06-27 13:41:13 (9256): Guest Log: -rwx------. 1 atlas atlas     32308 Jun 20 16:55 runpilot2-wrapper.sh
2024-06-27 13:41:13 (9256): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 20 16:55 queuedata.json
2024-06-27 13:41:13 (9256): Guest Log: -rwxr-xr-x. 1 atlas atlas      6294 Jun 26 23:48 init_data.xml
2024-06-27 13:41:13 (9256): Guest Log: -rwxr-xr-x. 1 atlas atlas    482469 Jun 26 23:48 input.tar.gz
2024-06-27 13:41:13 (9256): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 26 23:48 start_atlas.sh
2024-06-27 13:41:13 (9256): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 26 23:48 EVNT.40024038._000016.pool.root.1 -> /data/./ATLAS.root_0
2024-06-27 13:41:13 (9256): Guest Log: -rw-r--r--. 1 atlas atlas      2490 Jun 26 23:50 pandaJob.out
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas       424 Jun 26 23:52 setup.sh.local
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas   1034703 Jun 26 23:59 agis_schedconf.cvmfs.json
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 26 23:59 cric_ddmendpoints.json
2024-06-27 13:41:13 (9256): Guest Log: drwx------. 4 atlas atlas      4096 Jun 26 23:59 pilot3
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas 271345638 Jun 27 12:38 HITS.40024040._001164.pool.root.1
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas      1041 Jun 27 12:39 memory_monitor_summary.json
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas         0 Jun 27 12:39 agis_ddmendpoints.agis.ALL.json
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas    655386 Jun 27 12:39 log.40024040._001164.job.log.tgz.1
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas        95 Jun 27 12:40 pilot_heartbeat.json
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas      7768 Jun 27 12:40 heartbeat.json
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas      4394 Jun 27 12:41 pilotlog.txt
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas   4300403 Jun 27 12:41 log.40024040._001164.job.log.1
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas       357 Jun 27 12:41 output.list
2024-06-27 13:41:13 (9256): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 27 12:41 runtime_log
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas   4976640 Jun 27 12:41 result.tar.gz
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas       650 Jun 27 12:41 XYsNDmrFae5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmzilKDmQnWjwm.diag
2024-06-27 13:41:13 (9256): Guest Log: -rw-r--r--. 1 atlas atlas     10925 Jun 27 12:41 runtime_log.err
2024-06-27 13:41:13 (9256): Guest Log: Looking for outputfile HITS.40024040._001164.pool.root.1
2024-06-27 13:41:13 (9256): Guest Log: HITS file was successfully produced
2024-06-27 13:41:13 (9256): Guest Log: -rw-------. 1 atlas atlas 271345638 Jun 27 12:38 /home/atlas/RunAtlas/HITS.40024040._001164.pool.root.1
2024-06-27 13:41:18 (9256): Guest Log: Successfully finished the ATLAS job!
2024-06-27 13:41:18 (9256): Guest Log: Copying the results back to the shared directory!
2024-06-27 13:41:18 (9256): Guest Log:  *** Contents of shared directory: ***
2024-06-27 13:41:18 (9256): Guest Log: total 869448
2024-06-27 13:41:18 (9256): Guest Log: -rwxrwxrwx. 1 root root 613474921 Jun 26 23:45 ATLAS.root_0
2024-06-27 13:41:18 (9256): Guest Log: -rwxrwxrwx. 1 root root 271345638 Jun 27 12:41 HITS.pool.root.1
2024-06-27 13:41:18 (9256): Guest Log: -rwxrwxrwx. 1 root root      6294 Jun 26 23:45 init_data.xml
2024-06-27 13:41:18 (9256): Guest Log: -rwxrwxrwx. 1 root root    482469 Jun 20 22:18 input.tar.gz
2024-06-27 13:41:18 (9256): Guest Log: -rwxrwxrwx. 1 root root   4976640 Jun 27 12:41 result.tar.gz
2024-06-27 13:41:18 (9256): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 20 22:18 start_atlas.sh
2024-06-27 13:41:18 (9256): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-27 13:41:18 (9256): VM Completion File Detected.
2024-06-27 13:41:18 (9256): Powering off VM.
2024-06-27 13:41:19 (9256): Successfully stopped VM.
2024-06-27 13:41:19 (9256): Deregistering VM. (boinc_48d196a8ed945078, slot#3)
2024-06-27 13:41:19 (9256): Removing network bandwidth throttle group from VM.
2024-06-27 13:41:20 (9256): Removing VM from VirtualBox.
13:41:25 (9256): called boinc_finish(0)

</stderr_txt>
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