Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:49 (6967): wrapper (7.15.26016): starting
00:38:49 (6967): wrapper (7.15.26016): starting
00:38:49 (6967): wrapper: running run_atlas (--nthreads 2)
[2024-06-21 00:38:50] Arguments: --nthreads 2
[2024-06-21 00:38:50] Threads: 2
[2024-06-21 00:38:50] Checking for CVMFS
[2024-06-21 00:38:50] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 00:38:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 00:38:50] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 00:38:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 00:38:51] 2.11.3.0 2626 16609 57948 134105 0 17 3544484 6291456 4545 130560 1 75873905 99.998 2548713 2262 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://198.51.100.58:7028 1
[2024-06-21 00:38:51] CVMFS is ok
[2024-06-21 00:38:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 00:38:51] Checking for apptainer binary...
[2024-06-21 00:38:51] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 00:38:51] Running /usr/bin/apptainer --version
[2024-06-21 00:38:51] apptainer version 1.3.0-2.1
[2024-06-21 00:38:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 00:38:51] b3
[2024-06-21 00:38:51] apptainer works
[2024-06-21 00:38:51] Set ATHENA_PROC_NUMBER=2
[2024-06-21 00:38:51] Set ATHENA_CORE_NUMBER=2
[2024-06-21 00:38:51] Starting ATLAS job with PandaID=6238970446
[2024-06-21 00:38:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc3/BOINC_ATLAS/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 00:38:51] Starting apptainer container.
[2024-06-21 00:38:51] To get some details on systemd level run
[2024-06-21 00:38:51] systemctl status ATLAS_boinc3_1_eULLDm7Aae5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmvWXKDmD4kHyn_0.scope
[2024-06-21 00:38:51] ----,^^^^,<<<~_____---,^^^,<<~____--,^^,<~__;_
[2024-06-21 08:21:09] Container ATLAS_boinc3_1_eULLDm7Aae5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmvWXKDmD4kHyn_0 finished with status code 0.
[2024-06-21 08:21:09]  *** The last 200 lines of the pilot log: ***
[2024-06-21 08:21:10] 2024-06-21 06:20:45,739 | INFO     | monitor loop #2127: job 0:6238970446 is in state 'finished'
[2024-06-21 08:21:10] 2024-06-21 06:20:45,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:21:10] 2024-06-21 06:20:48,245 | INFO     | monitor loop #2128: job 0:6238970446 is in state 'finished'
[2024-06-21 08:21:10] 2024-06-21 06:20:48,245 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,219 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-21 08:21:10] 2024-06-21 06:20:49,220 | INFO     | using path: /home/boinc3/BOINC_ATLAS/slots/1/PanDA_Pilot-6238970446/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,221 | INFO     | extracted standard info from prmon json
[2024-06-21 08:21:10] 2024-06-21 06:20:49,221 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 08:21:10] 2024-06-21 06:20:49,221 | WARNING  | GPU info not found in prmon json
[2024-06-21 08:21:10] 2024-06-21 06:20:49,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 08:21:10] 2024-06-21 06:20:49,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 08:21:10] 2024-06-21 06:20:49,229 | INFO     | fitting pss+swap vs Time
[2024-06-21 08:21:10] 2024-06-21 06:20:49,229 | INFO     | model: linear, x: [1718923232.0, 1718923293.0, 1718923354.0, 1718923415.0, 1718923476.0, 1718923537.0, 1718923598.0, 1718923659.0, 1718923720.0, 1718923781.0, 1718
[2024-06-21 08:21:10] 2024-06-21 06:20:49,229 | INFO     | sum of square deviations: 28825106042.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,234 | INFO     | sum of deviations: 30431695066.999992
[2024-06-21 08:21:10] 2024-06-21 06:20:49,234 | INFO     | mean x: 1718937018.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,234 | INFO     | mean y: 2286437.894039735
[2024-06-21 08:21:10] 2024-06-21 06:20:49,234 | INFO     | -- intersect: -1812456831.2177913
[2024-06-21 08:21:10] 2024-06-21 06:20:49,234 | INFO     | intersect: -1812456831.2177913
[2024-06-21 08:21:10] 2024-06-21 06:20:49,235 | INFO     | chi2: 2.908386610661313
[2024-06-21 08:21:10] 2024-06-21 06:20:49,235 | INFO     | model: linear, x: [1718923232.0, 1718923293.0, 1718923354.0, 1718923415.0, 1718923476.0, 1718923537.0, 1718923598.0, 1718923659.0, 1718923720.0, 1718923781.0, 1718
[2024-06-21 08:21:10] 2024-06-21 06:20:49,235 | INFO     | sum of square deviations: 27881125552.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,240 | INFO     | sum of deviations: 55484375730.00003
[2024-06-21 08:21:10] 2024-06-21 06:20:49,240 | INFO     | mean x: 1718936865.5
[2024-06-21 08:21:10] 2024-06-21 06:20:49,240 | INFO     | mean y: 2290448.7901785714
[2024-06-21 08:21:10] 2024-06-21 06:20:49,240 | INFO     | -- intersect: -3418451612.8483276
[2024-06-21 08:21:10] 2024-06-21 06:20:49,240 | INFO     | intersect: -3418451612.8483276
[2024-06-21 08:21:10] 2024-06-21 06:20:49,241 | INFO     | chi2: 2.2646724487035104
[2024-06-21 08:21:10] 2024-06-21 06:20:49,241 | INFO     | current chi2=2.2646724487035104 (change=22.133032781753666 %)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,241 | INFO     | right removable region: 447
[2024-06-21 08:21:10] 2024-06-21 06:20:49,241 | INFO     | model: linear, x: [1718923537.0, 1718923598.0, 1718923659.0, 1718923720.0, 1718923781.0, 1718923842.0, 1718923903.0, 1718923964.0, 1718924025.0, 1718924086.0, 1718
[2024-06-21 08:21:10] 2024-06-21 06:20:49,242 | INFO     | sum of square deviations: 27881125552.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,246 | INFO     | sum of deviations: -61407244326.5
[2024-06-21 08:21:10] 2024-06-21 06:20:49,246 | INFO     | mean x: 1718937170.5
[2024-06-21 08:21:10] 2024-06-21 06:20:49,246 | INFO     | mean y: 2301240.453125
[2024-06-21 08:21:10] 2024-06-21 06:20:49,246 | INFO     | -- intersect: 3788202731.9093866
[2024-06-21 08:21:10] 2024-06-21 06:20:49,246 | INFO     | intersect: 3788202731.9093866
[2024-06-21 08:21:10] 2024-06-21 06:20:49,247 | INFO     | chi2: 0.891216481088439
[2024-06-21 08:21:10] 2024-06-21 06:20:49,247 | INFO     | current chi2=0.891216481088439 (change=69.35701471663037 %)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,247 | INFO     | model: linear, x: [1718923842.0, 1718923903.0, 1718923964.0, 1718924025.0, 1718924086.0, 1718924147.0, 1718924208.0, 1718924269.0, 1718924330.0, 1718924391.0, 1718
[2024-06-21 08:21:10] 2024-06-21 06:20:49,247 | INFO     | sum of square deviations: 26957982662.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,251 | INFO     | sum of deviations: -62382697919.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,252 | INFO     | mean x: 1718937323.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,252 | INFO     | mean y: 2301389.458239278
[2024-06-21 08:21:10] 2024-06-21 06:20:49,252 | INFO     | -- intersect: 3980045166.0190053
[2024-06-21 08:21:10] 2024-06-21 06:20:49,252 | INFO     | intersect: 3980045166.0190053
[2024-06-21 08:21:10] 2024-06-21 06:20:49,253 | INFO     | chi2: 0.8432253037558654
[2024-06-21 08:21:10] 2024-06-21 06:20:49,253 | INFO     | current chi2=0.8432253037558654 (change=5.384906849339479 %)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,253 | INFO     | left removable region: 20
[2024-06-21 08:21:10] 2024-06-21 06:20:49,253 | INFO     | model: linear, x: [1718924452.0, 1718924513.0, 1718924574.0, 1718924635.0, 1718924696.0, 1718924757.0, 1718924818.0, 1718924879.0, 1718924940.0, 1718925001.0, 1718
[2024-06-21 08:21:10] 2024-06-21 06:20:49,253 | INFO     | sum of square deviations: 24141245198.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,257 | INFO     | sum of deviations: -12447338652.000002
[2024-06-21 08:21:10] 2024-06-21 06:20:49,257 | INFO     | mean x: 1718937445.0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,258 | INFO     | mean y: 2301395.0304449648
[2024-06-21 08:21:10] 2024-06-21 06:20:49,258 | INFO     | -- intersect: 888593561.1566235
[2024-06-21 08:21:10] 2024-06-21 06:20:49,258 | INFO     | intersect: 888593561.1566235
[2024-06-21 08:21:10] 2024-06-21 06:20:49,258 | INFO     | chi2: 0.13463950689806634
[2024-06-21 08:21:10] 2024-06-21 06:20:49,258 | INFO     | -- intersect: 888593561.1566235
[2024-06-21 08:21:10] 2024-06-21 06:20:49,259 | INFO     | current memory leak: -0.52 B/s (using 427 data points, chi2=0.13)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,259 | INFO     | ..............................
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . Timing measurements:
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . get job = 0 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . initial setup = 2 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . payload setup = 15 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . stage-in = 0 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . payload execution = 27607 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . stage-out = 1 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | . log creation = 0 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,260 | INFO     | ..............................
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | 
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | job summary report
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | --------------------------------------------------
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | PanDA job id: 6238970446
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | task id: 40024040
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | errors: (none)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,662 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | pilot state: finished 
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | transexitcode: 0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | exeerrorcode: 0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | exeerrordiag: 
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | exitcode: 0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | exitmsg: OK
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | cpuconsumptiontime: 53520 s
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | nevents: 400
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | neventsw: 0
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | pid: 19432
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | pgrp: 19432
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | corecount: 2
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | event service: False
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | sizes: {0: 2386686, 1: 2386885, 11: 2386885, 15: 2387119, 22: 2387147, 27626: 2423965, 27627: 2424092, 27628: 2433128, 27631: 2433184, 27646: 2433354}
[2024-06-21 08:21:10] 2024-06-21 06:20:49,663 | INFO     | --------------------------------------------------
[2024-06-21 08:21:10] 2024-06-21 06:20:49,664 | INFO     | 
[2024-06-21 08:21:10] 2024-06-21 06:20:49,664 | INFO     | executing command: ls -lF /home/boinc3/BOINC_ATLAS/slots/1
[2024-06-21 08:21:10] 2024-06-21 06:20:49,723 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | job 6238970446 has completed (purged errors)
[2024-06-21 08:21:10] 2024-06-21 06:20:49,725 | INFO     | overall cleanup function is called
[2024-06-21 08:21:10] 2024-06-21 06:20:50,732 | INFO     | --- collectZombieJob: --- 10, [19432]
[2024-06-21 08:21:10] 2024-06-21 06:20:50,733 | INFO     | zombie collector waiting for pid 19432
[2024-06-21 08:21:10] 2024-06-21 06:20:50,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 08:21:10] 2024-06-21 06:20:51,738 | INFO     | collected zombie processes
[2024-06-21 08:21:10] 2024-06-21 06:20:51,739 | INFO     | will now attempt to kill all subprocesses of pid=19432
[2024-06-21 08:21:10] 2024-06-21 06:20:51,858 | INFO     | process IDs to be killed: [19432] (in reverse order)
[2024-06-21 08:21:10] 2024-06-21 06:20:51,950 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 08:21:10] 2024-06-21 06:20:51,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 08:21:10] 2024-06-21 06:20:51,958 | INFO     | did not find any defunct processes belonging to 19432
[2024-06-21 08:21:10] 2024-06-21 06:20:51,966 | INFO     | did not find any defunct processes belonging to 19432
[2024-06-21 08:21:10] 2024-06-21 06:20:51,966 | INFO     | ready for new job
[2024-06-21 08:21:10] 2024-06-21 06:20:51,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 08:21:10] 2024-06-21 06:20:51,968 | INFO     | *************************************
[2024-06-21 08:21:10] 2024-06-21 06:20:51,968 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 08:21:10] 2024-06-21 06:20:51,969 | INFO     | *************************************
[2024-06-21 08:21:10] 2024-06-21 06:20:51,969 | INFO     | 
[2024-06-21 08:21:10] 2024-06-21 06:20:51,971 | INFO     | architecture information:
[2024-06-21 08:21:10] 2024-06-21 06:20:51,971 | INFO     | executing command: cat /etc/os-release
[2024-06-21 08:21:10] 2024-06-21 06:20:52,007 | INFO     | cat /etc/os-release:
[2024-06-21 08:21:10] NAME="CentOS Linux"
[2024-06-21 08:21:10] VERSION="7 (Core)"
[2024-06-21 08:21:10] ID="centos"
[2024-06-21 08:21:10] ID_LIKE="rhel fedora"
[2024-06-21 08:21:10] VERSION_ID="7"
[2024-06-21 08:21:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 08:21:10] ANSI_COLOR="0;31"
[2024-06-21 08:21:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 08:21:10] HOME_URL="https://www.centos.org/"
[2024-06-21 08:21:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 08:21:10] 
[2024-06-21 08:21:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 08:21:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 08:21:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 08:21:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 08:21:10] 
[2024-06-21 08:21:10] 2024-06-21 06:20:52,008 | INFO     | *************************************
[2024-06-21 08:21:10] 2024-06-21 06:20:52,511 | INFO     | executing command: df -mP /home/boinc3/BOINC_ATLAS/slots/1
[2024-06-21 08:21:10] 2024-06-21 06:20:52,545 | INFO     | sufficient remaining disk space (101255741440 B)
[2024-06-21 08:21:10] 2024-06-21 06:20:52,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 08:21:10] 2024-06-21 06:20:52,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 08:21:10] 2024-06-21 06:20:52,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 08:21:10] 2024-06-21 06:20:52,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 08:21:10] 2024-06-21 06:20:52,547 | INFO     | aborting loop
[2024-06-21 08:21:10] 2024-06-21 06:20:52,844 | INFO     | all payload control threads have been joined
[2024-06-21 08:21:10] 2024-06-21 06:20:53,302 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 08:21:10] 2024-06-21 06:20:53,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 08:21:10] 2024-06-21 06:20:53,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 08:21:10] 2024-06-21 06:20:53,456 | INFO     | all data control threads have been joined
[2024-06-21 08:21:10] 2024-06-21 06:20:53,549 | INFO     | [job] retrieve thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:53,550 | INFO     | [job] job monitor thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:53,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 08:21:10] 2024-06-21 06:20:53,836 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:53,852 | INFO     | [payload] control thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:53,863 | INFO     | all job control threads have been joined
[2024-06-21 08:21:10] 2024-06-21 06:20:54,169 | INFO     | [job] validate thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,385 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 08:21:10] 2024-06-21 06:20:54,462 | INFO     | [data] control thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,487 | INFO     | [payload] failed_post thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,556 | INFO     | [data] copytool_out thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,799 | INFO     | [payload] validate_post thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,869 | INFO     | [job] control thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,972 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:54,976 | INFO     | [data] copytool_in thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:55,391 | INFO     | [job] queue monitor thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:20:57,719 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:21:02,801 | INFO     | job.realtimelogging is not enabled
[2024-06-21 08:21:10] 2024-06-21 06:21:03,806 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 08:21:10] 2024-06-21 06:21:04,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225821931328)>', '<ExcThread(monitor, started 140225460307712)>']
[2024-06-21 08:21:10] 2024-06-21 06:21:05,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 08:21:10] 2024-06-21 06:21:05,375 | INFO     | [monitor] control thread has ended
[2024-06-21 08:21:10] 2024-06-21 06:21:09,412 | INFO     | all workflow threads have been joined
[2024-06-21 08:21:10] 2024-06-21 06:21:09,412 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 08:21:10] 2024-06-21 06:21:09,412 | INFO     | traces error code: 0
[2024-06-21 08:21:10] 2024-06-21 06:21:09,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 08:21:10] 2024-06-21 06:21:09,657 [wrapper] ==== pilot stdout END ====
[2024-06-21 08:21:10] 2024-06-21 06:21:09,671 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 08:21:10] 2024-06-21 06:21:09,674 [wrapper] pilotpid: 11940
[2024-06-21 08:21:10] 2024-06-21 06:21:09,691 [wrapper] Pilot exit status: 0
[2024-06-21 08:21:10] 2024-06-21 06:21:09,744 [wrapper] pandaids: 6238970446
[2024-06-21 08:21:10] 2024-06-21 06:21:09,811 [wrapper] cleanup supervisor_pilot 12218 11941
[2024-06-21 08:21:10] 2024-06-21 06:21:09,819 [wrapper] Test setup, not cleaning
[2024-06-21 08:21:10] 2024-06-21 06:21:09,824 [wrapper] ==== wrapper stdout END ====
[2024-06-21 08:21:10] 2024-06-21 06:21:09,833 [wrapper] ==== wrapper stderr END ====
[2024-06-21 08:21:10] 2024-06-21 06:21:09,844 [wrapper] apfmon messages muted
[2024-06-21 08:21:10]  *** Error codes and diagnostics ***
[2024-06-21 08:21:10]     "exeErrorCode": 0,
[2024-06-21 08:21:10]     "exeErrorDiag": "",
[2024-06-21 08:21:10]     "pilotErrorCode": 0,
[2024-06-21 08:21:10]     "pilotErrorDiag": "",
[2024-06-21 08:21:10]  *** Listing of results directory ***
[2024-06-21 08:21:10] total 887992
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc    469766 Jun 20 18:39 pilot3.tar.gz
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc      5654 Jun 20 18:48 queuedata.json
[2024-06-21 08:21:10] -rwx------ 1 boinc3 boinc     32308 Jun 20 18:50 runpilot2-wrapper.sh
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc       100 Jun 21 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 08:21:10] -rwxr-xr-x 1 boinc3 boinc      9754 Jun 21 00:38 run_atlas
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc       105 Jun 21 00:38 job.xml
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc      6686 Jun 21 00:38 init_data.xml
[2024-06-21 08:21:10] -rw-r--r-- 2 boinc3 boinc 616306688 Jun 21 00:38 EVNT.40024038._000013.pool.root.1
[2024-06-21 08:21:10] -rw-r--r-- 2 boinc3 boinc     17537 Jun 21 00:38 start_atlas.sh
[2024-06-21 08:21:10] drwxrwx--x 2 boinc3 boinc       100 Jun 21 00:38 shared
[2024-06-21 08:21:10] -rw-r--r-- 2 boinc3 boinc    482477 Jun 21 00:38 input.tar.gz
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc      8192 Jun 21 00:38 boinc_mmap_file
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc         0 Jun 21 00:38 boinc_lockfile
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc      2490 Jun 21 00:38 pandaJob.out
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc       452 Jun 21 00:38 setup.sh.local
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc   1024151 Jun 21 00:39 agis_schedconf.cvmfs.json
[2024-06-21 08:21:10] drwx------ 4 boinc3 boinc       400 Jun 21 00:39 pilot3
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc 282742821 Jun 21 08:19 HITS.40024040._001141.pool.root.1
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc        95 Jun 21 08:20 pilot_heartbeat.json
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc      1033 Jun 21 08:20 memory_monitor_summary.json
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc         0 Jun 21 08:20 agis_ddmendpoints.agis.ALL.json
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc   1321251 Jun 21 08:20 cric_ddmendpoints.json
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc    445345 Jun 21 08:20 log.40024040._001141.job.log.tgz.1
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc      7660 Jun 21 08:20 heartbeat.json
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc      4294 Jun 21 08:21 pilotlog.txt
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc   2921857 Jun 21 08:21 log.40024040._001141.job.log.1
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc       357 Jun 21 08:21 output.list
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc       620 Jun 21 08:21 runtime_log
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc   3389440 Jun 21 08:21 result.tar.gz
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc     11451 Jun 21 08:21 runtime_log.err
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc       632 Jun 21 08:21 eULLDm7Aae5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmvWXKDmD4kHyn.diag
[2024-06-21 08:21:10] -rw-r--r-- 1 boinc3 boinc     21816 Jun 21 08:21 stderr.txt
[2024-06-21 08:21:10] HITS file was successfully produced:
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc 282742821 Jun 21 08:19 shared/HITS.pool.root.1
[2024-06-21 08:21:10]  *** Contents of shared directory: ***
[2024-06-21 08:21:10] total 881788
[2024-06-21 08:21:10] -rw-r--r-- 2 boinc3 boinc 616306688 Jun 21 00:38 ATLAS.root_0
[2024-06-21 08:21:10] -rw-r--r-- 2 boinc3 boinc     17537 Jun 21 00:38 start_atlas.sh
[2024-06-21 08:21:10] -rw-r--r-- 2 boinc3 boinc    482477 Jun 21 00:38 input.tar.gz
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc 282742821 Jun 21 08:19 HITS.pool.root.1
[2024-06-21 08:21:10] -rw------- 1 boinc3 boinc   3389440 Jun 21 08:21 result.tar.gz
08:21:11 (6967): run_atlas exited; CPU time 53380.063883
08:21:11 (6967): called boinc_finish(0)

</stderr_txt>
]]>

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