Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:07:45 (4023895): wrapper (7.7.26015): starting
12:07:45 (4023895): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 12:07:45] Arguments: --nthreads 4
[2024-06-22 12:07:45] Threads: 4
[2024-06-22 12:07:45] Checking for CVMFS
[2024-06-22 12:07:45] No cvmfs_config command found, will try listing directly
[2024-06-22 12:07:45] CVMFS is ok
[2024-06-22 12:07:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 12:07:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 12:07:45] Further information can be found at the LHC@home message board.
[2024-06-22 12:07:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 12:07:45] Checking for apptainer binary...
[2024-06-22 12:07:45] which: no apptainer in ((null))
[2024-06-22 12:07:45] apptainer is not installed, using version from CVMFS
[2024-06-22 12:07:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 12:07:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-06-22 12:07:47] apptainer works
[2024-06-22 12:07:47] Set ATHENA_PROC_NUMBER=4
[2024-06-22 12:07:47] Set ATHENA_CORE_NUMBER=4
[2024-06-22 12:07:47] Starting ATLAS job with PandaID=6238970402
[2024-06-22 12:07:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 15:33:24]  *** The last 200 lines of the pilot log: ***
[2024-06-22 15:33:24] 2024-06-22 13:33:01,779 | INFO     | intersect: -58614770714.13102
[2024-06-22 15:33:24] 2024-06-22 13:33:01,779 | INFO     | chi2: 4.99489350617125
[2024-06-22 15:33:24] 2024-06-22 13:33:01,779 | INFO     | model: linear, x: [1719050953.0, 1719051014.0, 1719051075.0, 1719051136.0, 1719051197.0, 1719051258.0, 1719051319.0, 1719051380.0, 1719051441.0, 1719051502.0, 1719
[2024-06-22 15:33:24] 2024-06-22 13:33:01,779 | INFO     | sum of square deviations: 2334680984.137765
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | sum of deviations: 96112060358.84183
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | mean x: 1719056900.5663266
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | mean y: 2285659.1275510206
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | -- intersect: -70766312581.94371
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | intersect: -70766312581.94371
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | chi2: 4.219155504799639
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | current chi2=4.219155504799639 (change=15.53062143193198 %)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,780 | INFO     | right removable region: 195
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | model: linear, x: [1719051258.0, 1719051319.0, 1719051380.0, 1719051441.0, 1719051502.0, 1719051563.0, 1719051624.0, 1719051685.0, 1719051746.0, 1719051807.0, 1719
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | sum of square deviations: 2334673054.137765
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | sum of deviations: 42176523093.07652
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | mean x: 1719057205.5663266
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | mean y: 2313566.647959184
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | -- intersect: -31052936675.088646
[2024-06-22 15:33:24] 2024-06-22 13:33:01,781 | INFO     | intersect: -31052936675.088646
[2024-06-22 15:33:24] 2024-06-22 13:33:01,782 | INFO     | chi2: 2.7482397552692066
[2024-06-22 15:33:24] 2024-06-22 13:33:01,782 | INFO     | current chi2=2.7482397552692066 (change=44.97901202750922 %)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,782 | INFO     | model: linear, x: [1719051563.0, 1719051624.0, 1719051685.0, 1719051746.0, 1719051807.0, 1719051868.0, 1719051929.0, 1719051990.0, 1719052051.0, 1719052112.0, 1719
[2024-06-22 15:33:24] 2024-06-22 13:33:01,782 | INFO     | sum of square deviations: 2160507684.1151786
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | sum of deviations: 3771784473.2251244
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | mean x: 1719057358.0680628
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | mean y: 2347212.9057591623
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | -- intersect: -2998759378.575754
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | intersect: -2998759378.575754
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | chi2: 1.1778031625202343
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | current chi2=1.1778031625202343 (change=57.14336202792971 %)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | model: linear, x: [1719051868.0, 1719051929.0, 1719051990.0, 1719052051.0, 1719052112.0, 1719052173.0, 1719052234.0, 1719052295.0, 1719052356.0, 1719052417.0, 1719
[2024-06-22 15:33:24] 2024-06-22 13:33:01,783 | INFO     | sum of square deviations: 1995226201.5913994
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | sum of deviations: -8458445985.8494625
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | mean x: 1719057510.5698924
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | mean y: 2358328.0268817204
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | -- intersect: 7290030817.555477
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | intersect: 7290030817.555477
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | chi2: 0.8106784272826858
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | current chi2=0.8106784272826858 (change=31.170296270217513 %)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | model: linear, x: [1719052173.0, 1719052234.0, 1719052295.0, 1719052356.0, 1719052417.0, 1719052478.0, 1719052539.0, 1719052600.0, 1719052661.0, 1719052722.0, 1719
[2024-06-22 15:33:24] 2024-06-22 13:33:01,784 | INFO     | sum of square deviations: 1838596044.0663004
[2024-06-22 15:33:24] 2024-06-22 13:33:01,785 | INFO     | sum of deviations: -9187445535.110498
[2024-06-22 15:33:24] 2024-06-22 13:33:01,785 | INFO     | mean x: 1719057663.0718231
[2024-06-22 15:33:24] 2024-06-22 13:33:01,785 | INFO     | mean y: 2359035.546961326
[2024-06-22 15:33:24] 2024-06-22 13:33:01,785 | INFO     | -- intersect: 8592472509.443449
[2024-06-22 15:33:24] 2024-06-22 13:33:01,785 | INFO     | intersect: 8592472509.443449
[2024-06-22 15:33:24] 2024-06-22 13:33:01,785 | INFO     | chi2: 0.8101382949677997
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | current chi2=0.8101382949677997 (change=0.06662719725953656 %)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | left removable region: 40
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | model: linear, x: [1719053393.0, 1719053454.0, 1719053515.0, 1719053576.0, 1719053637.0, 1719053698.0, 1719053759.0, 1719053820.0, 1719053881.0, 1719053942.0, 1719
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | sum of square deviations: 1154590721.9096742
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | sum of deviations: 1147900968.251613
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | mean x: 1719058090.083871
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | mean y: 2371953.980645161
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | -- intersect: -1706725831.6175482
[2024-06-22 15:33:24] 2024-06-22 13:33:01,786 | INFO     | intersect: -1706725831.6175482
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | chi2: 0.00012704355599748972
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | -- intersect: -1706725831.6175482
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | current memory leak: 0.99 B/s (using 155 data points, chi2=0.00)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | ..............................
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . Timing measurements:
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . get job = 0 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . initial setup = 1 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . payload setup = 15 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . stage-in = 0 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . payload execution = 12221 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . stage-out = 0 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | . log creation = 0 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,787 | INFO     | ..............................
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | 
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | job summary report
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | --------------------------------------------------
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | PanDA job id: 6238970402
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | task id: 40024040
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | errors: (none)
[2024-06-22 15:33:24] 2024-06-22 13:33:01,986 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | pilot state: finished 
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | transexitcode: 0
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | exeerrorcode: 0
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | exeerrordiag: 
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | exitcode: 0
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | exitmsg: OK
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | cpuconsumptiontime: 45826 s
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | nevents: 400
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | neventsw: 0
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | pid: 4036780
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | pgrp: 4036780
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | corecount: 4
[2024-06-22 15:33:24] 2024-06-22 13:33:01,987 | INFO     | event service: False
[2024-06-22 15:33:24] 2024-06-22 13:33:01,988 | INFO     | sizes: {0: 2386708, 1: 2386907, 12: 2387141, 22: 2387141, 12241: 2416669, 12242: 2425835, 12254: 2425949}
[2024-06-22 15:33:24] 2024-06-22 13:33:01,988 | INFO     | --------------------------------------------------
[2024-06-22 15:33:24] 2024-06-22 13:33:01,988 | INFO     | 
[2024-06-22 15:33:24] 2024-06-22 13:33:01,988 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-06-22 15:33:24] 2024-06-22 13:33:02,006 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | job 6238970402 has completed (purged errors)
[2024-06-22 15:33:24] 2024-06-22 13:33:02,008 | INFO     | overall cleanup function is called
[2024-06-22 15:33:24] 2024-06-22 13:33:03,016 | INFO     | --- collectZombieJob: --- 10, [4036780]
[2024-06-22 15:33:24] 2024-06-22 13:33:03,016 | INFO     | zombie collector waiting for pid 4036780
[2024-06-22 15:33:24] 2024-06-22 13:33:03,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 15:33:24] 2024-06-22 13:33:04,021 | INFO     | collected zombie processes
[2024-06-22 15:33:24] 2024-06-22 13:33:04,021 | INFO     | will now attempt to kill all subprocesses of pid=4036780
[2024-06-22 15:33:24] 2024-06-22 13:33:04,191 | INFO     | process IDs to be killed: [4036780] (in reverse order)
[2024-06-22 15:33:24] 2024-06-22 13:33:04,313 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 15:33:24] 2024-06-22 13:33:04,314 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 15:33:24] 2024-06-22 13:33:04,326 | INFO     | did not find any defunct processes belonging to 4036780
[2024-06-22 15:33:24] 2024-06-22 13:33:04,339 | INFO     | did not find any defunct processes belonging to 4036780
[2024-06-22 15:33:24] 2024-06-22 13:33:04,339 | INFO     | ready for new job
[2024-06-22 15:33:24] 2024-06-22 13:33:04,340 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 15:33:24] 2024-06-22 13:33:04,341 | INFO     | *************************************
[2024-06-22 15:33:24] 2024-06-22 13:33:04,341 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 15:33:24] 2024-06-22 13:33:04,341 | INFO     | *************************************
[2024-06-22 15:33:24] 2024-06-22 13:33:04,341 | INFO     | 
[2024-06-22 15:33:24] 2024-06-22 13:33:04,346 | INFO     | architecture information:
[2024-06-22 15:33:24] 2024-06-22 13:33:04,346 | INFO     | executing command: cat /etc/os-release
[2024-06-22 15:33:24] 2024-06-22 13:33:04,362 | INFO     | cat /etc/os-release:
[2024-06-22 15:33:24] NAME="CentOS Linux"
[2024-06-22 15:33:24] VERSION="7 (Core)"
[2024-06-22 15:33:24] ID="centos"
[2024-06-22 15:33:24] ID_LIKE="rhel fedora"
[2024-06-22 15:33:24] VERSION_ID="7"
[2024-06-22 15:33:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 15:33:24] ANSI_COLOR="0;31"
[2024-06-22 15:33:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 15:33:24] HOME_URL="https://www.centos.org/"
[2024-06-22 15:33:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 15:33:24] 
[2024-06-22 15:33:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 15:33:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 15:33:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 15:33:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 15:33:24] 
[2024-06-22 15:33:24] 2024-06-22 13:33:04,362 | INFO     | *************************************
[2024-06-22 15:33:24] 2024-06-22 13:33:04,864 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-06-22 15:33:24] 2024-06-22 13:33:04,884 | INFO     | sufficient remaining disk space (3159937253376 B)
[2024-06-22 15:33:24] 2024-06-22 13:33:04,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 15:33:24] 2024-06-22 13:33:04,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 15:33:24] 2024-06-22 13:33:04,962 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 15:33:24] 2024-06-22 13:33:04,962 | INFO     | aborting loop
[2024-06-22 15:33:24] 2024-06-22 13:33:05,348 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 15:33:24] 2024-06-22 13:33:05,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 15:33:24] 2024-06-22 13:33:05,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 15:33:24] 2024-06-22 13:33:05,564 | INFO     | all data control threads have been joined
[2024-06-22 15:33:24] 2024-06-22 13:33:05,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 15:33:24] 2024-06-22 13:33:05,890 | INFO     | [job] retrieve thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:05,905 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:05,955 | INFO     | all payload control threads have been joined
[2024-06-22 15:33:24] 2024-06-22 13:33:05,967 | INFO     | [job] job monitor thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:06,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 15:33:24] 2024-06-22 13:33:06,466 | INFO     | all job control threads have been joined
[2024-06-22 15:33:24] 2024-06-22 13:33:06,569 | INFO     | [data] control thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:06,613 | INFO     | [payload] validate_post thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:06,651 | INFO     | [payload] failed_post thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:06,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 15:33:24] 2024-06-22 13:33:06,960 | INFO     | [payload] control thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:07,016 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:07,148 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:07,226 | INFO     | [job] validate thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:07,236 | INFO     | [data] copytool_in thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:07,478 | INFO     | [job] control thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:07,860 | INFO     | [job] queue monitor thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:08,161 | INFO     | [data] copytool_out thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:09,717 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:15,646 | INFO     | job.realtimelogging is not enabled
[2024-06-22 15:33:24] 2024-06-22 13:33:16,651 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 15:33:24] 2024-06-22 13:33:18,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47419810944064)>', '<ExcThread(monitor, started 47419995420416)>']
[2024-06-22 15:33:24] 2024-06-22 13:33:19,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 15:33:24] 2024-06-22 13:33:19,418 | INFO     | [monitor] control thread has ended
[2024-06-22 15:33:24] 2024-06-22 13:33:23,531 | INFO     | all workflow threads have been joined
[2024-06-22 15:33:24] 2024-06-22 13:33:23,531 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 15:33:24] 2024-06-22 13:33:23,532 | INFO     | traces error code: 0
[2024-06-22 15:33:24] 2024-06-22 13:33:23,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 15:33:24] 2024-06-22 13:33:23,625 [wrapper] ==== pilot stdout END ====
[2024-06-22 15:33:24] 2024-06-22 13:33:23,628 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 15:33:24] 2024-06-22 13:33:23,629 [wrapper] pilotpid: 4028794
[2024-06-22 15:33:24] 2024-06-22 13:33:23,631 [wrapper] Pilot exit status: 0
[2024-06-22 15:33:24] 2024-06-22 13:33:23,640 [wrapper] pandaids: 6238970402
[2024-06-22 15:33:24] 2024-06-22 13:33:23,718 [wrapper] cleanup supervisor_pilot 1150401 4028795
[2024-06-22 15:33:24] 2024-06-22 13:33:23,720 [wrapper] Test setup, not cleaning
[2024-06-22 15:33:24] 2024-06-22 13:33:23,722 [wrapper] ==== wrapper stdout END ====
[2024-06-22 15:33:24] 2024-06-22 13:33:23,724 [wrapper] ==== wrapper stderr END ====
[2024-06-22 15:33:24] 2024-06-22 13:33:23,728 [wrapper] apfmon messages muted
[2024-06-22 15:33:24]  *** Error codes and diagnostics ***
[2024-06-22 15:33:24]     "exeErrorCode": 0,
[2024-06-22 15:33:24]     "exeErrorDiag": "",
[2024-06-22 15:33:24]     "pilotErrorCode": 0,
[2024-06-22 15:33:24]     "pilotErrorDiag": "",
[2024-06-22 15:33:24]  *** Listing of results directory ***
[2024-06-22 15:33:24] total 877748
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc    469766 Jun 20 18:39 pilot3.tar.gz
[2024-06-22 15:33:24] -rwx------ 1 boinc boinc     32308 Jun 20 18:41 runpilot2-wrapper.sh
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc      5654 Jun 20 18:41 queuedata.json
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc       100 Jun 22 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 15:33:24] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 12:07 run_atlas
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc       105 Jun 22 12:07 job.xml
[2024-06-22 15:33:24] -rw-r--r-- 2 boinc boinc     17537 Jun 22 12:07 start_atlas.sh
[2024-06-22 15:33:24] drwxrwx--x 2 boinc boinc      4096 Jun 22 12:07 shared
[2024-06-22 15:33:24] -rw-r--r-- 2 boinc boinc    482473 Jun 22 12:07 input.tar.gz
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc      6642 Jun 22 12:07 init_data.xml
[2024-06-22 15:33:24] -rw-r--r-- 2 boinc boinc 614276930 Jun 22 12:07 EVNT.40024038._000012.pool.root.1
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc         0 Jun 22 12:07 boinc_lockfile
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc      2491 Jun 22 12:07 pandaJob.out
[2024-06-22 15:33:24] -rw------- 1 boinc boinc       424 Jun 22 12:07 setup.sh.local
[2024-06-22 15:33:24] -rw------- 1 boinc boinc   1025921 Jun 22 12:08 agis_schedconf.cvmfs.json
[2024-06-22 15:33:24] -rw------- 1 boinc boinc   1321363 Jun 22 12:08 cric_ddmendpoints.json
[2024-06-22 15:33:24] drwx------ 4 boinc boinc      4096 Jun 22 12:08 pilot3
[2024-06-22 15:33:24] -rw------- 1 boinc boinc 277897365 Jun 22 15:32 HITS.40024040._001118.pool.root.1
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc       531 Jun 22 15:32 boinc_task_state.xml
[2024-06-22 15:33:24] -rw------- 1 boinc boinc      1041 Jun 22 15:32 memory_monitor_summary.json
[2024-06-22 15:33:24] -rw------- 1 boinc boinc         0 Jun 22 15:32 agis_ddmendpoints.agis.ALL.json
[2024-06-22 15:33:24] -rw------- 1 boinc boinc    324532 Jun 22 15:32 log.40024040._001118.job.log.tgz.1
[2024-06-22 15:33:24] -rw------- 1 boinc boinc        95 Jun 22 15:32 pilot_heartbeat.json
[2024-06-22 15:33:24] -rw------- 1 boinc boinc      7675 Jun 22 15:33 heartbeat.json
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc        28 Jun 22 15:33 wrapper_checkpoint.txt
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc      8192 Jun 22 15:33 boinc_mmap_file
[2024-06-22 15:33:24] -rw------- 1 boinc boinc      4294 Jun 22 15:33 pilotlog.txt
[2024-06-22 15:33:24] -rw------- 1 boinc boinc   1226471 Jun 22 15:33 log.40024040._001118.job.log.1
[2024-06-22 15:33:24] -rw------- 1 boinc boinc       357 Jun 22 15:33 output.list
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc       620 Jun 22 15:33 runtime_log
[2024-06-22 15:33:24] -rw------- 1 boinc boinc   1566720 Jun 22 15:33 result.tar.gz
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc     11410 Jun 22 15:33 runtime_log.err
[2024-06-22 15:33:24] -rw------- 1 boinc boinc       659 Jun 22 15:33 kxqNDm71Ze5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmoWXKDmg3gLKm.diag
[2024-06-22 15:33:24] -rw-r--r-- 1 boinc boinc     21357 Jun 22 15:33 stderr.txt
[2024-06-22 15:33:24] HITS file was successfully produced:
[2024-06-22 15:33:24] -rw------- 1 boinc boinc 277897365 Jun 22 15:32 shared/HITS.pool.root.1
[2024-06-22 15:33:24]  *** Contents of shared directory: ***
[2024-06-22 15:33:24] total 873300
[2024-06-22 15:33:24] -rw-r--r-- 2 boinc boinc     17537 Jun 22 12:07 start_atlas.sh
[2024-06-22 15:33:24] -rw-r--r-- 2 boinc boinc    482473 Jun 22 12:07 input.tar.gz
[2024-06-22 15:33:24] -rw-r--r-- 2 boinc boinc 614276930 Jun 22 12:07 ATLAS.root_0
[2024-06-22 15:33:24] -rw------- 1 boinc boinc 277897365 Jun 22 15:32 HITS.pool.root.1
[2024-06-22 15:33:24] -rw------- 1 boinc boinc   1566720 Jun 22 15:33 result.tar.gz
15:33:26 (4023895): run_atlas exited; CPU time 45565.806957
15:33:26 (4023895): called boinc_finish(0)

</stderr_txt>
]]>

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