Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:59:13 (1301745): wrapper (7.7.26015): starting
05:59:13 (1301745): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 05:59:13] Arguments: --nthreads 4
[2024-06-22 05:59:13] Threads: 4
[2024-06-22 05:59:13] Checking for CVMFS
[2024-06-22 05:59:13] No cvmfs_config command found, will try listing directly
[2024-06-22 05:59:13] CVMFS is ok
[2024-06-22 05:59:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 05:59:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 05:59:13] Further information can be found at the LHC@home message board.
[2024-06-22 05:59:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 05:59:13] Checking for apptainer binary...
[2024-06-22 05:59:13] which: no apptainer in ((null))
[2024-06-22 05:59:13] apptainer is not installed, using version from CVMFS
[2024-06-22 05:59:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 05:59:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-06-22 05:59:14] apptainer works
[2024-06-22 05:59:14] Set ATHENA_PROC_NUMBER=4
[2024-06-22 05:59:14] Set ATHENA_CORE_NUMBER=4
[2024-06-22 05:59:14] Starting ATLAS job with PandaID=6238951403
[2024-06-22 05:59:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 10:51:02]  *** The last 200 lines of the pilot log: ***
[2024-06-22 10:51:02] 2024-06-22 08:50:48,833 | INFO     | current chi2=0.0020450470221214647 (change=44.21987204733139 %)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,833 | INFO     | model: linear, x: [1719030318.0, 1719030379.0, 1719030440.0, 1719030501.0, 1719030562.0, 1719030623.0, 1719030684.0, 1719030745.0, 1719030806.0, 1719030867.0, 1719
[2024-06-22 10:51:02] 2024-06-22 08:50:48,833 | INFO     | sum of square deviations: 5513070810.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,835 | INFO     | sum of deviations: 10213077499.999998
[2024-06-22 10:51:02] 2024-06-22 08:50:48,835 | INFO     | mean x: 1719038248.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,836 | INFO     | mean y: 2369761.900383142
[2024-06-22 10:51:02] 2024-06-22 08:50:48,836 | INFO     | -- intersect: -3182184084.2868776
[2024-06-22 10:51:02] 2024-06-22 08:50:48,836 | INFO     | intersect: -3182184084.2868776
[2024-06-22 10:51:02] 2024-06-22 08:50:48,836 | INFO     | chi2: 0.000939085627346888
[2024-06-22 10:51:02] 2024-06-22 08:50:48,836 | INFO     | current chi2=0.000939085627346888 (change=54.07999829887963 %)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,837 | INFO     | model: linear, x: [1719030623.0, 1719030684.0, 1719030745.0, 1719030806.0, 1719030867.0, 1719030928.0, 1719030989.0, 1719031050.0, 1719031111.0, 1719031172.0, 1719
[2024-06-22 10:51:02] 2024-06-22 08:50:48,837 | INFO     | sum of square deviations: 5202255680.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,839 | INFO     | sum of deviations: 8954168863.5
[2024-06-22 10:51:02] 2024-06-22 08:50:48,839 | INFO     | mean x: 1719038400.5
[2024-06-22 10:51:02] 2024-06-22 08:50:48,839 | INFO     | mean y: 2370378.83203125
[2024-06-22 10:51:02] 2024-06-22 08:50:48,839 | INFO     | -- intersect: -2956453844.301489
[2024-06-22 10:51:02] 2024-06-22 08:50:48,839 | INFO     | intersect: -2956453844.301489
[2024-06-22 10:51:02] 2024-06-22 08:50:48,840 | INFO     | chi2: 0.0006308992799472458
[2024-06-22 10:51:02] 2024-06-22 08:50:48,840 | INFO     | current chi2=0.0006308992799472458 (change=32.8177046293779 %)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,840 | INFO     | model: linear, x: [1719030928.0, 1719030989.0, 1719031050.0, 1719031111.0, 1719031172.0, 1719031233.0, 1719031294.0, 1719031355.0, 1719031416.0, 1719031477.0, 1719
[2024-06-22 10:51:02] 2024-06-22 08:50:48,841 | INFO     | sum of square deviations: 4903347750.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,843 | INFO     | sum of deviations: 7854021572.000001
[2024-06-22 10:51:02] 2024-06-22 08:50:48,843 | INFO     | mean x: 1719038553.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,843 | INFO     | mean y: 2370939.972111554
[2024-06-22 10:51:02] 2024-06-22 08:50:48,843 | INFO     | -- intersect: -2751128621.294304
[2024-06-22 10:51:02] 2024-06-22 08:50:48,843 | INFO     | intersect: -2751128621.294304
[2024-06-22 10:51:02] 2024-06-22 08:50:48,843 | INFO     | chi2: 0.0004110364341945834
[2024-06-22 10:51:02] 2024-06-22 08:50:48,844 | INFO     | current chi2=0.0004110364341945834 (change=34.849119778841214 %)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,844 | INFO     | model: linear, x: [1719031233.0, 1719031294.0, 1719031355.0, 1719031416.0, 1719031477.0, 1719031538.0, 1719031599.0, 1719031660.0, 1719031721.0, 1719031782.0, 1719
[2024-06-22 10:51:02] 2024-06-22 08:50:48,844 | INFO     | sum of square deviations: 4616114457.5
[2024-06-22 10:51:02] 2024-06-22 08:50:48,846 | INFO     | sum of deviations: 6877352096.999999
[2024-06-22 10:51:02] 2024-06-22 08:50:48,846 | INFO     | mean x: 1719038705.5
[2024-06-22 10:51:02] 2024-06-22 08:50:48,846 | INFO     | mean y: 2371458.3577235774
[2024-06-22 10:51:02] 2024-06-22 08:50:48,846 | INFO     | -- intersect: -2558751008.371014
[2024-06-22 10:51:02] 2024-06-22 08:50:48,846 | INFO     | intersect: -2558751008.371014
[2024-06-22 10:51:02] 2024-06-22 08:50:48,847 | INFO     | chi2: 0.00023305298690187547
[2024-06-22 10:51:02] 2024-06-22 08:50:48,847 | INFO     | current chi2=0.00023305298690187547 (change=43.30113646530202 %)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,847 | INFO     | model: linear, x: [1719031538.0, 1719031599.0, 1719031660.0, 1719031721.0, 1719031782.0, 1719031843.0, 1719031904.0, 1719031965.0, 1719032026.0, 1719032087.0, 1719
[2024-06-22 10:51:02] 2024-06-22 08:50:48,847 | INFO     | sum of square deviations: 4340323240.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,849 | INFO     | sum of deviations: 6388038218.000001
[2024-06-22 10:51:02] 2024-06-22 08:50:48,849 | INFO     | mean x: 1719038858.0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,849 | INFO     | mean y: 2371727.5145228216
[2024-06-22 10:51:02] 2024-06-22 08:50:48,850 | INFO     | -- intersect: -2527690048.0529294
[2024-06-22 10:51:02] 2024-06-22 08:50:48,850 | INFO     | intersect: -2527690048.0529294
[2024-06-22 10:51:02] 2024-06-22 08:50:48,850 | INFO     | chi2: 0.0001855842338227045
[2024-06-22 10:51:02] 2024-06-22 08:50:48,850 | INFO     | current chi2=0.0001855842338227045 (change=20.36822342858759 %)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,850 | INFO     | left removable region: 90
[2024-06-22 10:51:02] 2024-06-22 08:50:48,850 | INFO     | model: linear, x: [1719034283.0, 1719034344.0, 1719034405.0, 1719034466.0, 1719034527.0, 1719034588.0, 1719034649.0, 1719034710.0, 1719034771.0, 1719034832.0, 1719
[2024-06-22 10:51:02] 2024-06-22 08:50:48,851 | INFO     | sum of square deviations: 2126802667.5
[2024-06-22 10:51:02] 2024-06-22 08:50:48,852 | INFO     | sum of deviations: 3634770887.9999995
[2024-06-22 10:51:02] 2024-06-22 08:50:48,852 | INFO     | mean x: 1719040047.5
[2024-06-22 10:51:02] 2024-06-22 08:50:48,852 | INFO     | mean y: 2373255.431578947
[2024-06-22 10:51:02] 2024-06-22 08:50:48,852 | INFO     | -- intersect: -2935518828.0421863
[2024-06-22 10:51:02] 2024-06-22 08:50:48,852 | INFO     | intersect: -2935518828.0421863
[2024-06-22 10:51:02] 2024-06-22 08:50:48,853 | INFO     | chi2: 0.0001293373401701235
[2024-06-22 10:51:02] 2024-06-22 08:50:48,853 | INFO     | -- intersect: -2935518828.0421863
[2024-06-22 10:51:02] 2024-06-22 08:50:48,853 | INFO     | current memory leak: 1.71 B/s (using 190 data points, chi2=0.00)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | ..............................
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . Timing measurements:
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . get job = 0 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . initial setup = 1 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . payload setup = 5 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . stage-in = 0 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . payload execution = 17446 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . stage-out = 1 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | . log creation = 0 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,854 | INFO     | ..............................
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | 
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | job summary report
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | --------------------------------------------------
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | PanDA job id: 6238951403
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | task id: 40024031
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | errors: (none)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | pilot state: finished 
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | transexitcode: 0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | exeerrorcode: 0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | exeerrordiag: 
[2024-06-22 10:51:02] 2024-06-22 08:50:48,950 | INFO     | exitcode: 0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | exitmsg: OK
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | cpuconsumptiontime: 66805 s
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | nevents: 400
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | neventsw: 0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | pid: 1313209
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | pgrp: 1313209
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | corecount: 4
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | event service: False
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | sizes: {0: 2386978, 5: 2387184, 11: 2387240, 17455: 2419276, 17457: 2428258, 17459: 2428314, 17467: 2428612}
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | --------------------------------------------------
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | 
[2024-06-22 10:51:02] 2024-06-22 08:50:48,951 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-06-22 10:51:02] 2024-06-22 08:50:48,974 | WARNING  | process 1313209 is no longer using CPU - aborting
[2024-06-22 10:51:02] 2024-06-22 08:50:48,974 | INFO     | aborting job monitoring since job object (job id=6238951403) has expired
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | job 6238951403 has completed (purged errors)
[2024-06-22 10:51:02] 2024-06-22 08:50:48,993 | INFO     | overall cleanup function is called
[2024-06-22 10:51:02] 2024-06-22 08:50:49,996 | INFO     | --- collectZombieJob: --- 10, [1313209]
[2024-06-22 10:51:02] 2024-06-22 08:50:49,996 | INFO     | zombie collector waiting for pid 1313209
[2024-06-22 10:51:02] 2024-06-22 08:50:49,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 10:51:02] 2024-06-22 08:50:51,000 | INFO     | collected zombie processes
[2024-06-22 10:51:02] 2024-06-22 08:50:51,001 | INFO     | will now attempt to kill all subprocesses of pid=1313209
[2024-06-22 10:51:02] 2024-06-22 08:50:51,159 | INFO     | process IDs to be killed: [1313209] (in reverse order)
[2024-06-22 10:51:02] 2024-06-22 08:50:51,277 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 10:51:02] 2024-06-22 08:50:51,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 10:51:02] 2024-06-22 08:50:51,286 | INFO     | did not find any defunct processes belonging to 1313209
[2024-06-22 10:51:02] 2024-06-22 08:50:51,294 | INFO     | did not find any defunct processes belonging to 1313209
[2024-06-22 10:51:02] 2024-06-22 08:50:51,294 | INFO     | ready for new job
[2024-06-22 10:51:02] 2024-06-22 08:50:51,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 10:51:02] 2024-06-22 08:50:51,297 | INFO     | *************************************
[2024-06-22 10:51:02] 2024-06-22 08:50:51,297 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 10:51:02] 2024-06-22 08:50:51,297 | INFO     | *************************************
[2024-06-22 10:51:02] 2024-06-22 08:50:51,297 | INFO     | 
[2024-06-22 10:51:02] 2024-06-22 08:50:51,301 | INFO     | architecture information:
[2024-06-22 10:51:02] 2024-06-22 08:50:51,301 | INFO     | executing command: cat /etc/os-release
[2024-06-22 10:51:02] 2024-06-22 08:50:51,317 | INFO     | cat /etc/os-release:
[2024-06-22 10:51:02] NAME="CentOS Linux"
[2024-06-22 10:51:02] VERSION="7 (Core)"
[2024-06-22 10:51:02] ID="centos"
[2024-06-22 10:51:02] ID_LIKE="rhel fedora"
[2024-06-22 10:51:02] VERSION_ID="7"
[2024-06-22 10:51:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 10:51:02] ANSI_COLOR="0;31"
[2024-06-22 10:51:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 10:51:02] HOME_URL="https://www.centos.org/"
[2024-06-22 10:51:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 10:51:02] 
[2024-06-22 10:51:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 10:51:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 10:51:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 10:51:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 10:51:02] 
[2024-06-22 10:51:02] 2024-06-22 08:50:51,317 | INFO     | *************************************
[2024-06-22 10:51:02] 2024-06-22 08:50:51,820 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-06-22 10:51:02] 2024-06-22 08:50:51,842 | INFO     | sufficient remaining disk space (656332029952 B)
[2024-06-22 10:51:02] 2024-06-22 08:50:51,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 10:51:02] 2024-06-22 08:50:51,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 10:51:02] 2024-06-22 08:50:51,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 10:51:02] 2024-06-22 08:50:51,843 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-22 10:51:02] 2024-06-22 08:50:51,843 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 10:51:02] 2024-06-22 08:50:51,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 10:51:02] 2024-06-22 08:50:51,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 10:51:02] 2024-06-22 08:50:52,062 | INFO     | all data control threads have been joined
[2024-06-22 10:51:02] 2024-06-22 08:50:52,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 10:51:02] 2024-06-22 08:50:52,467 | INFO     | all job control threads have been joined
[2024-06-22 10:51:02] 2024-06-22 08:50:52,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 10:51:02] 2024-06-22 08:50:52,482 | INFO     | aborting loop
[2024-06-22 10:51:02] 2024-06-22 08:50:52,847 | INFO     | [job] retrieve thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:52,879 | INFO     | [payload] validate_post thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,068 | INFO     | [data] control thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,076 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,165 | INFO     | all payload control threads have been joined
[2024-06-22 10:51:02] 2024-06-22 08:50:53,363 | INFO     | [payload] failed_post thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,412 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,412 | INFO     | [data] copytool_in thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,473 | INFO     | [job] control thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,487 | INFO     | [job] job monitor thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,632 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:53,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 10:51:02] 2024-06-22 08:50:54,049 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:54,167 | INFO     | [job] validate thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:54,171 | INFO     | [payload] control thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:54,394 | INFO     | [data] copytool_out thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:54,943 | INFO     | [job] queue monitor thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:55,848 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 10:51:02] 2024-06-22 08:50:56,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47846464353344)>', '<ExcThread(monitor, started 47846648829696)>']
[2024-06-22 10:51:02] 2024-06-22 08:50:56,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 10:51:02] 2024-06-22 08:50:56,863 | INFO     | [monitor] control thread has ended
[2024-06-22 10:51:02] 2024-06-22 08:51:01,791 | INFO     | all workflow threads have been joined
[2024-06-22 10:51:02] 2024-06-22 08:51:01,791 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 10:51:02] 2024-06-22 08:51:01,791 | INFO     | traces error code: 0
[2024-06-22 10:51:02] 2024-06-22 08:51:01,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 10:51:02] 2024-06-22 08:51:01,914 [wrapper] ==== pilot stdout END ====
[2024-06-22 10:51:02] 2024-06-22 08:51:01,917 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 10:51:02] 2024-06-22 08:51:01,919 [wrapper] pilotpid: 1306079
[2024-06-22 10:51:02] 2024-06-22 08:51:01,921 [wrapper] Pilot exit status: 0
[2024-06-22 10:51:02] 2024-06-22 08:51:01,959 [wrapper] pandaids: 6238951403
[2024-06-22 10:51:02] 2024-06-22 08:51:02,037 [wrapper] cleanup supervisor_pilot 1928167 1306080
[2024-06-22 10:51:02] 2024-06-22 08:51:02,044 [wrapper] Test setup, not cleaning
[2024-06-22 10:51:02] 2024-06-22 08:51:02,046 [wrapper] ==== wrapper stdout END ====
[2024-06-22 10:51:02] 2024-06-22 08:51:02,050 [wrapper] ==== wrapper stderr END ====
[2024-06-22 10:51:02] 2024-06-22 08:51:02,063 [wrapper] apfmon messages muted
[2024-06-22 10:51:02]  *** Error codes and diagnostics ***
[2024-06-22 10:51:02]     "exeErrorCode": 0,
[2024-06-22 10:51:02]     "exeErrorDiag": "",
[2024-06-22 10:51:02]     "pilotErrorCode": 0,
[2024-06-22 10:51:02]     "pilotErrorDiag": "",
[2024-06-22 10:51:02]  *** Listing of results directory ***
[2024-06-22 10:51:02] total 843236
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:55 pilot3.tar.gz
[2024-06-22 10:51:02] -rwx------ 1 boinc boinc     32308 Jun 20 18:03 runpilot2-wrapper.sh
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc      5654 Jun 20 18:03 queuedata.json
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc       100 Jun 22 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 10:51:02] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 05:59 run_atlas
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc       105 Jun 22 05:59 job.xml
[2024-06-22 10:51:02] -rw-r--r-- 2 boinc boinc 593837788 Jun 22 05:59 EVNT.40024029._000015.pool.root.1
[2024-06-22 10:51:02] drwxrwx--x 2 boinc boinc      4096 Jun 22 05:59 shared
[2024-06-22 10:51:02] -rw-r--r-- 2 boinc boinc    482520 Jun 22 05:59 input.tar.gz
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc      6661 Jun 22 05:59 init_data.xml
[2024-06-22 10:51:02] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:59 start_atlas.sh
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc         0 Jun 22 05:59 boinc_lockfile
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc      2570 Jun 22 05:59 pandaJob.out
[2024-06-22 10:51:02] -rw------- 1 boinc boinc       424 Jun 22 05:59 setup.sh.local
[2024-06-22 10:51:02] -rw------- 1 boinc boinc   1025953 Jun 22 05:59 agis_schedconf.cvmfs.json
[2024-06-22 10:51:02] -rw------- 1 boinc boinc   1321363 Jun 22 05:59 cric_ddmendpoints.json
[2024-06-22 10:51:02] drwx------ 4 boinc boinc      4096 Jun 22 05:59 pilot3
[2024-06-22 10:51:02] -rw------- 1 boinc boinc 261428254 Jun 22 10:50 HITS.40024031._000284.pool.root.1
[2024-06-22 10:51:02] -rw------- 1 boinc boinc        95 Jun 22 10:50 pilot_heartbeat.json
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc       532 Jun 22 10:50 boinc_task_state.xml
[2024-06-22 10:51:02] -rw------- 1 boinc boinc      1045 Jun 22 10:50 memory_monitor_summary.json
[2024-06-22 10:51:02] -rw------- 1 boinc boinc         0 Jun 22 10:50 agis_ddmendpoints.agis.ALL.json
[2024-06-22 10:51:02] -rw------- 1 boinc boinc    373548 Jun 22 10:50 log.40024031._000284.job.log.tgz.1
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc        28 Jun 22 10:50 wrapper_checkpoint.txt
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc      8192 Jun 22 10:50 boinc_mmap_file
[2024-06-22 10:51:02] -rw------- 1 boinc boinc      7753 Jun 22 10:50 heartbeat.json
[2024-06-22 10:51:02] -rw------- 1 boinc boinc      4344 Jun 22 10:51 pilotlog.txt
[2024-06-22 10:51:02] -rw------- 1 boinc boinc   1961177 Jun 22 10:51 log.40024031._000284.job.log.1
[2024-06-22 10:51:02] -rw------- 1 boinc boinc       357 Jun 22 10:51 output.list
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc       620 Jun 22 10:51 runtime_log
[2024-06-22 10:51:02] -rw------- 1 boinc boinc   2355200 Jun 22 10:51 result.tar.gz
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc     11410 Jun 22 10:51 runtime_log.err
[2024-06-22 10:51:02] -rw------- 1 boinc boinc       658 Jun 22 10:51 HDPKDmwQZe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmPVXKDmAMr0jn.diag
[2024-06-22 10:51:02] -rw-r--r-- 1 boinc boinc     21471 Jun 22 10:51 stderr.txt
[2024-06-22 10:51:02] HITS file was successfully produced:
[2024-06-22 10:51:02] -rw------- 1 boinc boinc 261428254 Jun 22 10:50 shared/HITS.pool.root.1
[2024-06-22 10:51:02]  *** Contents of shared directory: ***
[2024-06-22 10:51:02] total 838024
[2024-06-22 10:51:02] -rw-r--r-- 2 boinc boinc 593837788 Jun 22 05:59 ATLAS.root_0
[2024-06-22 10:51:02] -rw-r--r-- 2 boinc boinc    482520 Jun 22 05:59 input.tar.gz
[2024-06-22 10:51:02] -rw-r--r-- 2 boinc boinc     17537 Jun 22 05:59 start_atlas.sh
[2024-06-22 10:51:02] -rw------- 1 boinc boinc 261428254 Jun 22 10:50 HITS.pool.root.1
[2024-06-22 10:51:02] -rw------- 1 boinc boinc   2355200 Jun 22 10:51 result.tar.gz
10:51:04 (1301745): run_atlas exited; CPU time 66498.379217
10:51:04 (1301745): called boinc_finish(0)

</stderr_txt>
]]>

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