Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:16:39 (165553): wrapper (7.7.26015): starting
17:16:39 (165553): wrapper: running run_atlas (--nthreads 12)
[2024-06-20 17:16:39] Arguments: --nthreads 12
[2024-06-20 17:16:39] Threads: 12
[2024-06-20 17:16:39] Checking for CVMFS
[2024-06-20 17:16:39] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 17:16:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 17:16:39] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 17:16:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 17:16:39] 2.10.1.0 136058 233144 231028 134107 0 56 41072333 45568001 0 130560 0 701290063 99.729 493463813 14360 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-20 17:16:39] CVMFS is ok
[2024-06-20 17:16:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 17:16:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 17:16:39] Further information can be found at the LHC@home message board.
[2024-06-20 17:16:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 17:16:39] Checking for apptainer binary...
[2024-06-20 17:16:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 17:16:39] Running /usr/bin/apptainer --version
[2024-06-20 17:16:39] apptainer version 1.3.2-1.el7
[2024-06-20 17:16:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 17:16:40] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0039.triumf.lcg
[2024-06-20 17:16:40] apptainer works
[2024-06-20 17:16:40] Set ATHENA_PROC_NUMBER=12
[2024-06-20 17:16:40] Set ATHENA_CORE_NUMBER=12
[2024-06-20 17:16:40] Starting ATLAS job with PandaID=6238944744
[2024-06-20 17:16:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-20 18:15:16]  *** The last 200 lines of the pilot log: ***
[2024-06-20 18:15:17]  ddmendpoint=NDGF-T1_DATADISK
[2024-06-20 18:15:17]  direct_access_lan=False
[2024-06-20 18:15:17]  direct_access_wan=False
[2024-06-20 18:15:17]  domain=
[2024-06-20 18:15:17]  filesize=336917
[2024-06-20 18:15:17]  filetype=log
[2024-06-20 18:15:17]  guid=5083d5aa-7011-4c15-b49c-11ba58327897
[2024-06-20 18:15:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-20 18:15:17]  is_tar=False
[2024-06-20 18:15:17]  lfn=log.40024049._000928.job.log.tgz.1
[2024-06-20 18:15:17]  mtime=0
[2024-06-20 18:15:17]  protocol_id=None
[2024-06-20 18:15:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-20 18:15:17]  replicas=None
[2024-06-20 18:15:17]  scope=mc23_13p6TeV
[2024-06-20 18:15:17]  status=None
[2024-06-20 18:15:17]  status_code=0
[2024-06-20 18:15:17]  storage_token=
[2024-06-20 18:15:17]  surl=/home/boinc/slots/0/PanDA_Pilot-6238944744/log.40024049._000928.job.log.tgz.1
[2024-06-20 18:15:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/a0/log.40024049._000928.job.log.tgz.1
[2024-06-20 18:15:17]  workdir=None
[2024-06-20 18:15:17] ]
[2024-06-20 18:15:17] 2024-06-21 01:14:41,375 | INFO     | transferring file log.40024049._000928.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6238944744/log.40024049._000928.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-20 18:15:17] 2024-06-21 01:14:41,375 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6238944744/log.40024049._000928.job.log.tgz.1 /home/boinc/slots/0/log.40024049._000928.job.log.t
[2024-06-20 18:15:17] 2024-06-21 01:14:41,401 | INFO     | adding to output.list: log.40024049._000928.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/a0/log.40024049._000928.job.log.tg
[2024-06-20 18:15:17] 2024-06-21 01:14:41,401 | INFO     | summary of transferred files:
[2024-06-20 18:15:17] 2024-06-21 01:14:41,402 | INFO     |  -- lfn=log.40024049._000928.job.log.tgz.1, status_code=0, status=transferred
[2024-06-20 18:15:17] 2024-06-21 01:14:41,402 | INFO     | stage-out finished correctly
[2024-06-20 18:15:17] 2024-06-21 01:14:42,203 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-20 18:15:17] 2024-06-21 01:14:43,902 | INFO     | job 6238944744 has state=finished
[2024-06-20 18:15:17] 2024-06-21 01:14:43,902 | INFO     | preparing for final server update for job 6238944744 in state='finished'
[2024-06-20 18:15:17] 2024-06-21 01:14:43,903 | INFO     | this job has now completed (state=finished)
[2024-06-20 18:15:17] 2024-06-21 01:14:43,903 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-20 18:15:17] 2024-06-21 01:14:43,903 | INFO     | job 6238944744 has finished - writing final server update
[2024-06-20 18:15:17] 2024-06-21 01:14:43,903 | INFO     | total number of processed events: 400 (read)
[2024-06-20 18:15:17] 2024-06-21 01:14:43,910 | INFO     | executing command: lscpu
[2024-06-20 18:15:17] 2024-06-21 01:14:43,976 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-20 18:15:17] 2024-06-21 01:14:43,977 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-20 18:15:17] 2024-06-21 01:14:44,035 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-20 18:15:17] 2024-06-21 01:14:56,443 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-20 18:15:17] 2024-06-21 01:14:56,444 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6238944744/memory_monitor_summary.json (trf name=prmon)
[2024-06-20 18:15:17] 2024-06-21 01:14:56,451 | INFO     | extracted standard info from prmon json
[2024-06-20 18:15:17] 2024-06-21 01:14:56,452 | INFO     | extracted standard memory fields from prmon json
[2024-06-20 18:15:17] 2024-06-21 01:14:56,452 | WARNING  | GPU info not found in prmon json
[2024-06-20 18:15:17] 2024-06-21 01:14:56,454 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-20 18:15:17] 2024-06-21 01:14:56,454 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-20 18:15:17] 2024-06-21 01:14:56,456 | INFO     | fitting pss+swap vs Time
[2024-06-20 18:15:17] 2024-06-21 01:14:56,457 | INFO     | model: linear, x: [1718929346.0, 1718929407.0, 1718929468.0, 1718929529.0, 1718929590.0, 1718929651.0, 1718929712.0, 1718929773.0, 1718929834.0, 1718929895.0, 1718
[2024-06-20 18:15:17] 2024-06-21 01:14:56,457 | INFO     | sum of square deviations: 38744912.5
[2024-06-20 18:15:17] 2024-06-21 01:14:56,457 | INFO     | sum of deviations: 19085030411.0
[2024-06-20 18:15:17] 2024-06-21 01:14:56,457 | INFO     | mean x: 1718930840.5
[2024-06-20 18:15:17] 2024-06-21 01:14:56,458 | INFO     | mean y: 2763090.68
[2024-06-20 18:15:17] 2024-06-21 01:14:56,458 | INFO     | -- intersect: -846710914875.383
[2024-06-20 18:15:17] 2024-06-21 01:14:56,458 | INFO     | intersect: -846710914875.383
[2024-06-20 18:15:17] 2024-06-21 01:14:56,458 | INFO     | chi2: 1.8993328516175891
[2024-06-20 18:15:17] 2024-06-21 01:14:56,458 | INFO     | -- intersect: -846710914875.383
[2024-06-20 18:15:17] 2024-06-21 01:14:56,459 | INFO     | current memory leak: 492.58 B/s (using 50 data points, chi2=1.90)
[2024-06-20 18:15:17] 2024-06-21 01:14:56,459 | INFO     | ..............................
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . Timing measurements:
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . get job = 0 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . initial setup = 2 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . payload setup = 7 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . stage-in = 0 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . payload execution = 3439 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . stage-out = 0 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,460 | INFO     | . log creation = 0 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,461 | INFO     | ..............................
[2024-06-20 18:15:17] 2024-06-21 01:14:56,552 | INFO     | 
[2024-06-20 18:15:17] 2024-06-21 01:14:56,555 | WARNING  | process 176106 is no longer using CPU - aborting
[2024-06-20 18:15:17] 2024-06-21 01:14:56,555 | INFO     | job summary report
[2024-06-20 18:15:17] 2024-06-21 01:14:56,556 | INFO     | aborting job monitoring since job object (job id=6238944744) has expired
[2024-06-20 18:15:17] 2024-06-21 01:14:56,556 | INFO     | --------------------------------------------------
[2024-06-20 18:15:17] 2024-06-21 01:14:56,556 | INFO     | PanDA job id: 6238944744
[2024-06-20 18:15:17] 2024-06-21 01:14:56,556 | INFO     | task id: 40024049
[2024-06-20 18:15:17] 2024-06-21 01:14:56,556 | INFO     | errors: (none)
[2024-06-20 18:15:17] 2024-06-21 01:14:56,556 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | pilot state: finished 
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | transexitcode: 0
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | exeerrorcode: 0
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | exeerrordiag: 
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | exitcode: 0
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | exitmsg: OK
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | cpuconsumptiontime: 29927 s
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | nevents: 400
[2024-06-20 18:15:17] 2024-06-21 01:14:56,557 | INFO     | neventsw: 0
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | pid: 176106
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | pgrp: 176106
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | corecount: 12
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | event service: False
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | sizes: {0: 2385944, 1: 2386879, 6: 2387085, 12: 2387113, 3450: 2412718, 3451: 2421672, 3452: 2421856, 3466: 2422026}
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | --------------------------------------------------
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | 
[2024-06-20 18:15:17] 2024-06-21 01:14:56,558 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-20 18:15:17] 2024-06-21 01:14:56,588 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,588 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,588 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,588 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-20 18:15:17] 2024-06-21 01:14:56,590 | INFO     | job 6238944744 has completed (purged errors)
[2024-06-20 18:15:17] 2024-06-21 01:14:56,591 | INFO     | overall cleanup function is called
[2024-06-20 18:15:17] 2024-06-21 01:14:57,600 | INFO     | --- collectZombieJob: --- 10, [176106]
[2024-06-20 18:15:17] 2024-06-21 01:14:57,600 | INFO     | zombie collector waiting for pid 176106
[2024-06-20 18:15:17] 2024-06-21 01:14:57,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-20 18:15:17] 2024-06-21 01:14:58,605 | INFO     | collected zombie processes
[2024-06-20 18:15:17] 2024-06-21 01:14:58,606 | INFO     | will now attempt to kill all subprocesses of pid=176106
[2024-06-20 18:15:17] 2024-06-21 01:14:58,697 | INFO     | process IDs to be killed: [176106] (in reverse order)
[2024-06-20 18:15:17] 2024-06-21 01:14:58,779 | WARNING  | found no corresponding commands to process id(s)
[2024-06-20 18:15:17] 2024-06-21 01:14:58,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-20 18:15:17] 2024-06-21 01:14:58,785 | INFO     | did not find any defunct processes belonging to 176106
[2024-06-20 18:15:17] 2024-06-21 01:14:58,791 | INFO     | did not find any defunct processes belonging to 176106
[2024-06-20 18:15:17] 2024-06-21 01:14:58,791 | INFO     | ready for new job
[2024-06-20 18:15:17] 2024-06-21 01:14:58,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-20 18:15:17] 2024-06-21 01:14:58,793 | INFO     | *************************************
[2024-06-20 18:15:17] 2024-06-21 01:14:58,794 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-20 18:15:17] 2024-06-21 01:14:58,794 | INFO     | *************************************
[2024-06-20 18:15:17] 2024-06-21 01:14:58,794 | INFO     | 
[2024-06-20 18:15:17] 2024-06-21 01:14:58,799 | INFO     | architecture information:
[2024-06-20 18:15:17] 2024-06-21 01:14:58,799 | INFO     | executing command: cat /etc/os-release
[2024-06-20 18:15:17] 2024-06-21 01:14:58,822 | INFO     | cat /etc/os-release:
[2024-06-20 18:15:17] NAME="CentOS Linux"
[2024-06-20 18:15:17] VERSION="7 (Core)"
[2024-06-20 18:15:17] ID="centos"
[2024-06-20 18:15:17] ID_LIKE="rhel fedora"
[2024-06-20 18:15:17] VERSION_ID="7"
[2024-06-20 18:15:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-20 18:15:17] ANSI_COLOR="0;31"
[2024-06-20 18:15:17] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-20 18:15:17] HOME_URL="https://www.centos.org/"
[2024-06-20 18:15:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-20 18:15:17] 
[2024-06-20 18:15:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-20 18:15:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-20 18:15:17] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-20 18:15:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-20 18:15:17] 
[2024-06-20 18:15:17] 2024-06-21 01:14:58,822 | INFO     | *************************************
[2024-06-20 18:15:17] 2024-06-21 01:14:59,326 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-20 18:15:17] 2024-06-21 01:14:59,352 | INFO     | sufficient remaining disk space (2241321762816 B)
[2024-06-20 18:15:17] 2024-06-21 01:14:59,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-20 18:15:17] 2024-06-21 01:14:59,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-20 18:15:17] 2024-06-21 01:14:59,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-20 18:15:17] 2024-06-21 01:14:59,936 | INFO     | all payload control threads have been joined
[2024-06-20 18:15:17] 2024-06-21 01:15:00,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-20 18:15:17] 2024-06-21 01:15:00,070 | INFO     | aborting loop
[2024-06-20 18:15:17] 2024-06-21 01:15:00,217 | INFO     | found 0 job(s) in 20 queues
[2024-06-20 18:15:17] 2024-06-21 01:15:00,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-20 18:15:17] 2024-06-21 01:15:00,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-20 18:15:17] 2024-06-21 01:15:00,283 | INFO     | all data control threads have been joined
[2024-06-20 18:15:17] 2024-06-21 01:15:00,297 | INFO     | all job control threads have been joined
[2024-06-20 18:15:17] 2024-06-21 01:15:00,358 | INFO     | [job] retrieve thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:00,487 | INFO     | [job] create_data_payload thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:00,578 | INFO     | [payload] validate_pre thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:00,579 | INFO     | [payload] validate_post thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:00,775 | INFO     | [payload] execute_payloads thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:00,942 | INFO     | [payload] control thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,077 | INFO     | [job] job monitor thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,274 | INFO     | [job] validate thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,289 | INFO     | [data] control thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,303 | INFO     | [job] control thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,528 | INFO     | [data] copytool_out thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-20 18:15:17] 2024-06-21 01:15:01,740 | INFO     | [data] copytool_in thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,806 | INFO     | [payload] failed_post thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:01,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-20 18:15:17] 2024-06-21 01:15:02,573 | INFO     | [job] queue monitor thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:05,836 | INFO     | [data] queue_monitor thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:09,695 | INFO     | job.realtimelogging is not enabled
[2024-06-20 18:15:17] 2024-06-21 01:15:10,701 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-20 18:15:17] 2024-06-21 01:15:11,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921881683776)>', '<ExcThread(monitor, started 139921657243392)>']
[2024-06-20 18:15:17] 2024-06-21 01:15:11,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-20 18:15:17] 2024-06-21 01:15:11,284 | INFO     | [monitor] control thread has ended
[2024-06-20 18:15:17] 2024-06-21 01:15:16,290 | INFO     | all workflow threads have been joined
[2024-06-20 18:15:17] 2024-06-21 01:15:16,290 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-20 18:15:17] 2024-06-21 01:15:16,291 | INFO     | traces error code: 0
[2024-06-20 18:15:17] 2024-06-21 01:15:16,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-20 18:15:17] 2024-06-21 01:15:16,395 [wrapper] ==== pilot stdout END ====
[2024-06-20 18:15:17] 2024-06-21 01:15:16,400 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-20 18:15:17] 2024-06-21 01:15:16,404 [wrapper] pilotpid: 169716
[2024-06-20 18:15:17] 2024-06-21 01:15:16,408 [wrapper] Pilot exit status: 0
[2024-06-20 18:15:17] 2024-06-21 01:15:16,421 [wrapper] pandaids: 6238944744
[2024-06-20 18:15:17] 2024-06-21 01:15:16,476 [wrapper] cleanup supervisor_pilot 187999 169717
[2024-06-20 18:15:17] 2024-06-21 01:15:16,480 [wrapper] Test setup, not cleaning
[2024-06-20 18:15:17] 2024-06-21 01:15:16,483 [wrapper] ==== wrapper stdout END ====
[2024-06-20 18:15:17] 2024-06-21 01:15:16,487 [wrapper] ==== wrapper stderr END ====
[2024-06-20 18:15:17] 2024-06-21 01:15:16,495 [wrapper] apfmon messages muted
[2024-06-20 18:15:17]  *** Error codes and diagnostics ***
[2024-06-20 18:15:17]     "exeErrorCode": 0,
[2024-06-20 18:15:17]     "exeErrorDiag": "",
[2024-06-20 18:15:17]     "pilotErrorCode": 0,
[2024-06-20 18:15:17]     "pilotErrorDiag": "",
[2024-06-20 18:15:17]  *** Listing of results directory ***
[2024-06-20 18:15:17] total 872640
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc    469766 Jun 20 08:25 pilot3.tar.gz
[2024-06-20 18:15:17] -rwx------ 1 boinc boinc     32308 Jun 20 08:51 runpilot2-wrapper.sh
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc      5654 Jun 20 08:51 queuedata.json
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc       100 Jun 20 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-20 18:15:17] -rwxr-xr-x 1 boinc boinc      7986 Jun 20 17:16 run_atlas
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc       105 Jun 20 17:16 job.xml
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc      6629 Jun 20 17:16 init_data.xml
[2024-06-20 18:15:17] -rw-r--r-- 2 boinc boinc 613303629 Jun 20 17:16 EVNT.40024047._000010.pool.root.1
[2024-06-20 18:15:17] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:16 start_atlas.sh
[2024-06-20 18:15:17] drwxrwx--x 2 boinc boinc      4096 Jun 20 17:16 shared
[2024-06-20 18:15:17] -rw-r--r-- 2 boinc boinc    482483 Jun 20 17:16 input.tar.gz
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc         0 Jun 20 17:16 boinc_lockfile
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc      2501 Jun 20 17:16 pandaJob.out
[2024-06-20 18:15:17] -rw------- 1 boinc boinc       424 Jun 20 17:16 setup.sh.local
[2024-06-20 18:15:17] -rw------- 1 boinc boinc   1024134 Jun 20 17:16 agis_schedconf.cvmfs.json
[2024-06-20 18:15:17] -rw------- 1 boinc boinc         0 Jun 20 17:16 agis_ddmendpoints.agis.ALL.json
[2024-06-20 18:15:17] -rw------- 1 boinc boinc   1321251 Jun 20 17:16 cric_ddmendpoints.json
[2024-06-20 18:15:17] drwx------ 4 boinc boinc      4096 Jun 20 17:16 pilot3
[2024-06-20 18:15:17] -rw------- 1 boinc boinc        95 Jun 20 18:14 pilot_heartbeat.json
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc       530 Jun 20 18:14 boinc_task_state.xml
[2024-06-20 18:15:17] -rw------- 1 boinc boinc 275389286 Jun 20 18:14 HITS.40024049._000928.pool.root.1
[2024-06-20 18:15:17] -rw------- 1 boinc boinc      1053 Jun 20 18:14 memory_monitor_summary.json
[2024-06-20 18:15:17] -rw------- 1 boinc boinc    336917 Jun 20 18:14 log.40024049._000928.job.log.tgz.1
[2024-06-20 18:15:17] -rw------- 1 boinc boinc      7751 Jun 20 18:14 heartbeat.json
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc      8192 Jun 20 18:15 boinc_mmap_file
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc        27 Jun 20 18:15 wrapper_checkpoint.txt
[2024-06-20 18:15:17] -rw------- 1 boinc boinc      4282 Jun 20 18:15 pilotlog.txt
[2024-06-20 18:15:17] -rw------- 1 boinc boinc    337207 Jun 20 18:15 log.40024049._000928.job.log.1
[2024-06-20 18:15:17] -rw------- 1 boinc boinc       357 Jun 20 18:15 output.list
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc       620 Jun 20 18:15 runtime_log
[2024-06-20 18:15:17] -rw------- 1 boinc boinc    696320 Jun 20 18:15 result.tar.gz
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc     11286 Jun 20 18:15 runtime_log.err
[2024-06-20 18:15:17] -rw------- 1 boinc boinc       652 Jun 20 18:15 kP9KDmvFZe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmaUXKDm9AOCln.diag
[2024-06-20 18:15:17] -rw-r--r-- 1 boinc boinc     21239 Jun 20 18:15 stderr.txt
[2024-06-20 18:15:17] HITS file was successfully produced:
[2024-06-20 18:15:17] -rw------- 1 boinc boinc 275389286 Jun 20 18:14 shared/HITS.pool.root.1
[2024-06-20 18:15:17]  *** Contents of shared directory: ***
[2024-06-20 18:15:17] total 869048
[2024-06-20 18:15:17] -rw-r--r-- 2 boinc boinc 613303629 Jun 20 17:16 ATLAS.root_0
[2024-06-20 18:15:17] -rw-r--r-- 2 boinc boinc     17537 Jun 20 17:16 start_atlas.sh
[2024-06-20 18:15:17] -rw-r--r-- 2 boinc boinc    482483 Jun 20 17:16 input.tar.gz
[2024-06-20 18:15:17] -rw------- 1 boinc boinc 275389286 Jun 20 18:14 HITS.pool.root.1
[2024-06-20 18:15:17] -rw------- 1 boinc boinc    696320 Jun 20 18:15 result.tar.gz
18:15:18 (165553): run_atlas exited; CPU time 29737.402630
18:15:18 (165553): called boinc_finish(0)

</stderr_txt>
]]>

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