Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:26:33 (27551): wrapper (7.7.26015): starting
16:26:33 (27551): wrapper: running run_atlas (--nthreads 8)
[2024-06-20 16:26:33] Arguments: --nthreads 8
[2024-06-20 16:26:33] Threads: 8
[2024-06-20 16:26:33] Checking for CVMFS
[2024-06-20 16:26:33] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 16:26:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 16:26:34] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 16:26:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 16:26:34] 2.11.2.0 12485 7960 105576 134101 0 201 10777935 18432000 22014 130560 0 911519 98.281 2096884 58111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-20 16:26:34] CVMFS is ok
[2024-06-20 16:26:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 16:26:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 16:26:35] Further information can be found at the LHC@home message board.
[2024-06-20 16:26:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 16:26:35] Checking for apptainer binary...
[2024-06-20 16:26:35] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 16:26:35] Running /usr/bin/apptainer --version
[2024-06-20 16:26:35] apptainer version 1.3.1-1.el7
[2024-06-20 16:26:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 16:26:44] c-212-13.aglt2.org
[2024-06-20 16:26:44] apptainer works
[2024-06-20 16:26:44] Set ATHENA_PROC_NUMBER=8
[2024-06-20 16:26:44] Set ATHENA_CORE_NUMBER=8
[2024-06-20 16:26:44] Starting ATLAS job with PandaID=6238938838
[2024-06-20 16:26:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 04:33:43]  *** The last 200 lines of the pilot log: ***
[2024-06-21 04:33:43] 2024-06-21 08:33:09,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:12,089 | INFO     | monitor loop #3055: job 0:6238938838 is in state 'finished'
[2024-06-21 04:33:43] 2024-06-21 08:33:12,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:14,594 | INFO     | monitor loop #3056: job 0:6238938838 is in state 'finished'
[2024-06-21 04:33:43] 2024-06-21 08:33:14,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:17,099 | INFO     | monitor loop #3057: job 0:6238938838 is in state 'finished'
[2024-06-21 04:33:43] 2024-06-21 08:33:17,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:19,606 | INFO     | monitor loop #3058: job 0:6238938838 is in state 'finished'
[2024-06-21 04:33:43] 2024-06-21 08:33:19,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:22,129 | INFO     | monitor loop #3059: job 0:6238938838 is in state 'finished'
[2024-06-21 04:33:43] 2024-06-21 08:33:22,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:24,636 | INFO     | monitor loop #3060: job 0:6238938838 is in state 'finished'
[2024-06-21 04:33:43] 2024-06-21 08:33:24,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 04:33:43] 2024-06-21 08:33:24,866 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-21 04:33:43] 2024-06-21 08:33:24,866 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6238938838/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 04:33:43] 2024-06-21 08:33:24,867 | INFO     | extracted standard info from prmon json
[2024-06-21 04:33:43] 2024-06-21 08:33:24,867 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 04:33:43] 2024-06-21 08:33:24,867 | WARNING  | GPU info not found in prmon json
[2024-06-21 04:33:43] 2024-06-21 08:33:24,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 04:33:43] 2024-06-21 08:33:24,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 04:33:43] 2024-06-21 08:33:24,881 | INFO     | fitting pss+swap vs Time
[2024-06-21 04:33:43] 2024-06-21 08:33:24,881 | INFO     | model: linear, x: [1718915561.0, 1718915622.0, 1718915683.0, 1718915744.0, 1718915805.0, 1718915866.0, 1718915927.0, 1718915988.0, 1718916049.0, 1718916110.0, 1718
[2024-06-21 04:33:43] 2024-06-21 08:33:24,882 | INFO     | sum of square deviations: 110513772989.04665
[2024-06-21 04:33:43] 2024-06-21 08:33:24,890 | INFO     | sum of deviations: 1556850433584.5312
[2024-06-21 04:33:43] 2024-06-21 08:33:24,891 | INFO     | mean x: 1718937155.0366714
[2024-06-21 04:33:43] 2024-06-21 08:33:24,891 | INFO     | mean y: 2442737.3258110015
[2024-06-21 04:33:43] 2024-06-21 08:33:24,891 | INFO     | -- intersect: -24212892444.368164
[2024-06-21 04:33:43] 2024-06-21 08:33:24,891 | INFO     | intersect: -24212892444.368164
[2024-06-21 04:33:43] 2024-06-21 08:33:24,891 | INFO     | chi2: 18.85091896512382
[2024-06-21 04:33:43] 2024-06-21 08:33:24,892 | INFO     | model: linear, x: [1718915561.0, 1718915622.0, 1718915683.0, 1718915744.0, 1718915805.0, 1718915866.0, 1718915927.0, 1718915988.0, 1718916049.0, 1718916110.0, 1718
[2024-06-21 04:33:43] 2024-06-21 08:33:24,892 | INFO     | sum of square deviations: 108192137389.03964
[2024-06-21 04:33:43] 2024-06-21 08:33:24,901 | INFO     | sum of deviations: 1591824873067.888
[2024-06-21 04:33:43] 2024-06-21 08:33:24,902 | INFO     | mean x: 1718937002.5369318
[2024-06-21 04:33:43] 2024-06-21 08:33:24,902 | INFO     | mean y: 2445016.7542613638
[2024-06-21 04:33:43] 2024-06-21 08:33:24,902 | INFO     | -- intersect: -25288179070.24378
[2024-06-21 04:33:43] 2024-06-21 08:33:24,902 | INFO     | intersect: -25288179070.24378
[2024-06-21 04:33:43] 2024-06-21 08:33:24,903 | INFO     | chi2: 18.105006861066997
[2024-06-21 04:33:43] 2024-06-21 08:33:24,903 | INFO     | current chi2=18.105006861066997 (change=3.9569004855245513 %)
[2024-06-21 04:33:43] 2024-06-21 08:33:24,903 | INFO     | right removable region: 703
[2024-06-21 04:33:43] 2024-06-21 08:33:24,903 | INFO     | model: linear, x: [1718915866.0, 1718915927.0, 1718915988.0, 1718916049.0, 1718916110.0, 1718916171.0, 1718916232.0, 1718916293.0, 1718916354.0, 1718916415.0, 1718
[2024-06-21 04:33:43] 2024-06-21 08:33:24,904 | INFO     | sum of square deviations: 108192121529.03964
[2024-06-21 04:33:43] 2024-06-21 08:33:24,912 | INFO     | sum of deviations: 1320326773877.9114
[2024-06-21 04:33:43] 2024-06-21 08:33:24,913 | INFO     | mean x: 1718937307.5369318
[2024-06-21 04:33:43] 2024-06-21 08:33:24,913 | INFO     | mean y: 2458268.5610795454
[2024-06-21 04:33:43] 2024-06-21 08:33:24,913 | INFO     | -- intersect: -20974660191.487347
[2024-06-21 04:33:43] 2024-06-21 08:33:24,913 | INFO     | intersect: -20974660191.487347
[2024-06-21 04:33:43] 2024-06-21 08:33:24,913 | INFO     | chi2: 14.392837514718998
[2024-06-21 04:33:43] 2024-06-21 08:33:24,914 | INFO     | current chi2=14.392837514718998 (change=23.649146541092993 %)
[2024-06-21 04:33:43] 2024-06-21 08:33:24,914 | INFO     | left removable region: 10
[2024-06-21 04:33:43] 2024-06-21 08:33:24,914 | INFO     | model: linear, x: [1718916171.0, 1718916232.0, 1718916293.0, 1718916354.0, 1718916415.0, 1718916476.0, 1718916537.0, 1718916598.0, 1718916659.0, 1718916720.0, 1718
[2024-06-21 04:33:43] 2024-06-21 08:33:24,914 | INFO     | sum of square deviations: 103199441597.0243
[2024-06-21 04:33:43] 2024-06-21 08:33:24,938 | INFO     | sum of deviations: 1176340594303.6184
[2024-06-21 04:33:43] 2024-06-21 08:33:24,939 | INFO     | mean x: 1718937277.037518
[2024-06-21 04:33:43] 2024-06-21 08:33:24,939 | INFO     | mean y: 2472591.476190476
[2024-06-21 04:33:43] 2024-06-21 08:33:24,939 | INFO     | -- intersect: -19591196393.05892
[2024-06-21 04:33:43] 2024-06-21 08:33:24,939 | INFO     | intersect: -19591196393.05892
[2024-06-21 04:33:43] 2024-06-21 08:33:24,939 | INFO     | chi2: 11.188020926266232
[2024-06-21 04:33:43] 2024-06-21 08:33:24,940 | INFO     | -- intersect: -19591196393.05892
[2024-06-21 04:33:43] 2024-06-21 08:33:24,940 | INFO     | current memory leak: 11.40 B/s (using 693 data points, chi2=11.19)
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | ..............................
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . Timing measurements:
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . get job = 0 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . initial setup = 4 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . payload setup = 79 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . stage-in = 0 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . payload execution = 43279 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . stage-out = 4 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | . log creation = 0 s
[2024-06-21 04:33:43] 2024-06-21 08:33:24,941 | INFO     | ..............................
[2024-06-21 04:33:43] 2024-06-21 08:33:25,586 | INFO     | 
[2024-06-21 04:33:43] 2024-06-21 08:33:25,588 | INFO     | job summary report
[2024-06-21 04:33:43] 2024-06-21 08:33:25,588 | INFO     | --------------------------------------------------
[2024-06-21 04:33:43] 2024-06-21 08:33:25,588 | INFO     | PanDA job id: 6238938838
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | task id: 38921007
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | errors: (none)
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | pilot state: finished 
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | transexitcode: 0
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | exeerrorcode: 0
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | exeerrordiag: 
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | exitcode: 0
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | exitmsg: OK
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | cpuconsumptiontime: 128154 s
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | nevents: 400
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | neventsw: 0
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | pid: 8090
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | pgrp: 8090
[2024-06-21 04:33:43] 2024-06-21 08:33:25,589 | INFO     | corecount: 8
[2024-06-21 04:33:43] 2024-06-21 08:33:25,590 | INFO     | event service: False
[2024-06-21 04:33:43] 2024-06-21 08:33:25,590 | INFO     | sizes: {0: 2387116, 1: 2387116, 12: 2387144, 22: 2387172, 33: 2387200, 44: 2387228, 50: 2387590, 55: 2387618, 43360: 2430785, 43366: 2439801, 43407: 2439915}
[2024-06-21 04:33:43] 2024-06-21 08:33:25,590 | INFO     | --------------------------------------------------
[2024-06-21 04:33:43] 2024-06-21 08:33:25,590 | INFO     | 
[2024-06-21 04:33:43] 2024-06-21 08:33:25,590 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | job 6238938838 has completed (purged errors)
[2024-06-21 04:33:43] 2024-06-21 08:33:25,808 | INFO     | overall cleanup function is called
[2024-06-21 04:33:43] 2024-06-21 08:33:26,822 | INFO     | --- collectZombieJob: --- 10, [8090]
[2024-06-21 04:33:43] 2024-06-21 08:33:26,823 | INFO     | zombie collector waiting for pid 8090
[2024-06-21 04:33:43] 2024-06-21 08:33:26,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 04:33:43] 2024-06-21 08:33:27,824 | INFO     | collected zombie processes
[2024-06-21 04:33:43] 2024-06-21 08:33:27,824 | INFO     | will now attempt to kill all subprocesses of pid=8090
[2024-06-21 04:33:43] 2024-06-21 08:33:28,222 | INFO     | process IDs to be killed: [8090] (in reverse order)
[2024-06-21 04:33:43] 2024-06-21 08:33:28,326 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 04:33:43] 2024-06-21 08:33:28,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 04:33:43] 2024-06-21 08:33:28,337 | INFO     | did not find any defunct processes belonging to 8090
[2024-06-21 04:33:43] 2024-06-21 08:33:28,347 | INFO     | did not find any defunct processes belonging to 8090
[2024-06-21 04:33:43] 2024-06-21 08:33:28,348 | INFO     | ready for new job
[2024-06-21 04:33:43] 2024-06-21 08:33:28,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 04:33:43] 2024-06-21 08:33:28,350 | INFO     | *************************************
[2024-06-21 04:33:43] 2024-06-21 08:33:28,351 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 04:33:43] 2024-06-21 08:33:28,351 | INFO     | *************************************
[2024-06-21 04:33:43] 2024-06-21 08:33:28,351 | INFO     | 
[2024-06-21 04:33:43] 2024-06-21 08:33:28,355 | INFO     | architecture information:
[2024-06-21 04:33:43] 2024-06-21 08:33:28,356 | INFO     | executing command: cat /etc/os-release
[2024-06-21 04:33:43] 2024-06-21 08:33:28,451 | INFO     | cat /etc/os-release:
[2024-06-21 04:33:43] NAME="CentOS Linux"
[2024-06-21 04:33:43] VERSION="7 (Core)"
[2024-06-21 04:33:43] ID="centos"
[2024-06-21 04:33:43] ID_LIKE="rhel fedora"
[2024-06-21 04:33:43] VERSION_ID="7"
[2024-06-21 04:33:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 04:33:43] ANSI_COLOR="0;31"
[2024-06-21 04:33:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 04:33:43] HOME_URL="https://www.centos.org/"
[2024-06-21 04:33:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 04:33:43] 
[2024-06-21 04:33:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 04:33:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 04:33:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 04:33:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 04:33:43] 
[2024-06-21 04:33:43] 2024-06-21 08:33:28,451 | INFO     | *************************************
[2024-06-21 04:33:43] 2024-06-21 08:33:28,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-06-21 04:33:43] 2024-06-21 08:33:29,037 | INFO     | sufficient remaining disk space (99573825536 B)
[2024-06-21 04:33:43] 2024-06-21 08:33:29,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 04:33:43] 2024-06-21 08:33:29,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 04:33:43] 2024-06-21 08:33:29,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 04:33:43] 2024-06-21 08:33:29,038 | INFO     | aborting loop
[2024-06-21 04:33:43] 2024-06-21 08:33:29,038 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-21 04:33:43] 2024-06-21 08:33:29,038 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 04:33:43] 2024-06-21 08:33:29,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 04:33:43] 2024-06-21 08:33:29,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 04:33:43] 2024-06-21 08:33:29,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 04:33:43] 2024-06-21 08:33:29,245 | INFO     | all job control threads have been joined
[2024-06-21 04:33:43] 2024-06-21 08:33:29,460 | INFO     | all data control threads have been joined
[2024-06-21 04:33:43] 2024-06-21 08:33:29,717 | INFO     | all payload control threads have been joined
[2024-06-21 04:33:43] 2024-06-21 08:33:30,043 | INFO     | [job] retrieve thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,044 | INFO     | [job] job monitor thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,078 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 04:33:43] 2024-06-21 08:33:30,104 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,220 | INFO     | [payload] failed_post thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,251 | INFO     | [job] control thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,466 | INFO     | [data] control thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,600 | INFO     | [job] validate thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,604 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,619 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,723 | INFO     | [payload] control thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 04:33:43] 2024-06-21 08:33:30,816 | INFO     | [payload] validate_post thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:30,887 | INFO     | [data] copytool_in thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:31,077 | INFO     | [data] copytool_out thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:31,109 | INFO     | [job] queue monitor thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:34,819 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 04:33:43] 2024-06-21 08:33:36,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909997848384)>', '<ExcThread(monitor, started 139909406902016)>']
[2024-06-21 04:33:43] 2024-06-21 08:33:37,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 04:33:43] 2024-06-21 08:33:37,090 | INFO     | [monitor] control thread has ended
[2024-06-21 04:33:43] 2024-06-21 08:33:41,511 | INFO     | all workflow threads have been joined
[2024-06-21 04:33:43] 2024-06-21 08:33:41,511 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 04:33:43] 2024-06-21 08:33:41,512 | INFO     | traces error code: 0
[2024-06-21 04:33:43] 2024-06-21 08:33:41,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 04:33:43] 2024-06-21 08:33:41,753 [wrapper] ==== pilot stdout END ====
[2024-06-21 04:33:43] 2024-06-21 08:33:41,817 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 04:33:43] 2024-06-21 08:33:41,869 [wrapper] pilotpid: 51686
[2024-06-21 04:33:43] 2024-06-21 08:33:41,914 [wrapper] Pilot exit status: 0
[2024-06-21 04:33:43] 2024-06-21 08:33:42,186 [wrapper] pandaids: 6238938838
[2024-06-21 04:33:43] 2024-06-21 08:33:42,297 [wrapper] cleanup supervisor_pilot 71116 51687
[2024-06-21 04:33:43] 2024-06-21 08:33:42,310 [wrapper] Test setup, not cleaning
[2024-06-21 04:33:43] 2024-06-21 08:33:42,351 [wrapper] ==== wrapper stdout END ====
[2024-06-21 04:33:43] 2024-06-21 08:33:42,390 [wrapper] ==== wrapper stderr END ====
[2024-06-21 04:33:43] 2024-06-21 08:33:42,470 [wrapper] apfmon messages muted
[2024-06-21 04:33:43]  *** Error codes and diagnostics ***
[2024-06-21 04:33:43]     "exeErrorCode": 0,
[2024-06-21 04:33:43]     "exeErrorDiag": "",
[2024-06-21 04:33:43]     "pilotErrorCode": 0,
[2024-06-21 04:33:43]     "pilotErrorDiag": "",
[2024-06-21 04:33:43]  *** Listing of results directory ***
[2024-06-21 04:33:43] total 929628
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas    469766 Jun 20 11:25 pilot3.tar.gz
[2024-06-21 04:33:43] -rwx------ 1 boincer umatlas     32308 Jun 20 11:33 runpilot2-wrapper.sh
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas      5654 Jun 20 11:40 queuedata.json
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas       100 Jun 20 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 04:33:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun 20 16:26 run_atlas
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas       105 Jun 20 16:26 job.xml
[2024-06-21 04:33:43] -rw-r--r-- 2 boincer umatlas 586081205 Jun 20 16:26 EVNT.38776201._000852.pool.root.1
[2024-06-21 04:33:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 16:26 start_atlas.sh
[2024-06-21 04:33:43] drwxrwx--x 2 boincer umatlas      4096 Jun 20 16:26 shared
[2024-06-21 04:33:43] -rw-r--r-- 2 boincer umatlas    482528 Jun 20 16:26 input.tar.gz
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas         0 Jun 20 16:26 boinc_lockfile
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas      2630 Jun 20 16:26 pandaJob.out
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas       467 Jun 20 16:26 setup.sh.local
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas   1024127 Jun 20 16:28 agis_schedconf.cvmfs.json
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas   1321251 Jun 20 16:28 cric_ddmendpoints.json
[2024-06-21 04:33:43] drwx------ 4 boincer umatlas      4096 Jun 20 16:28 pilot3
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas      6389 Jun 21 04:30 init_data.xml
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas 352143100 Jun 21 04:31 HITS.38921007._051386.pool.root.1
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas       532 Jun 21 04:31 boinc_task_state.xml
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas      1089 Jun 21 04:32 memory_monitor_summary.json
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas        95 Jun 21 04:32 pilot_heartbeat.json
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas         0 Jun 21 04:32 agis_ddmendpoints.agis.ALL.json
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas    716486 Jun 21 04:32 log.38921007._051386.job.log.tgz.1
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas      7772 Jun 21 04:33 heartbeat.json
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas        29 Jun 21 04:33 wrapper_checkpoint.txt
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas      8192 Jun 21 04:33 boinc_mmap_file
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas      4334 Jun 21 04:33 pilotlog.txt
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas   4369643 Jun 21 04:33 log.38921007._051386.job.log.1
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas       357 Jun 21 04:33 output.list
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas       620 Jun 21 04:33 runtime_log
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas   5109760 Jun 21 04:33 result.tar.gz
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas     11405 Jun 21 04:33 runtime_log.err
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas       655 Jun 21 04:33 PIHODmwxYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDm6xqKDmKnLd7m.diag
[2024-06-21 04:33:43] -rw-r--r-- 1 boincer umatlas     21929 Jun 21 04:33 stderr.txt
[2024-06-21 04:33:43] HITS file was successfully produced:
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas 352143100 Jun 21 04:31 shared/HITS.pool.root.1
[2024-06-21 04:33:43]  *** Contents of shared directory: ***
[2024-06-21 04:33:43] total 921732
[2024-06-21 04:33:43] -rw-r--r-- 2 boincer umatlas 586081205 Jun 20 16:26 ATLAS.root_0
[2024-06-21 04:33:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 16:26 start_atlas.sh
[2024-06-21 04:33:43] -rw-r--r-- 2 boincer umatlas    482528 Jun 20 16:26 input.tar.gz
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas 352143100 Jun 21 04:31 HITS.pool.root.1
[2024-06-21 04:33:43] -rw------- 1 boincer umatlas   5109760 Jun 21 04:33 result.tar.gz
04:33:45 (27551): run_atlas exited; CPU time 125194.382769
04:33:45 (27551): called boinc_finish(0)

</stderr_txt>
]]>

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