Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:14:35 (1316896): wrapper (7.7.26015): starting
05:14:35 (1316896): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 05:14:35] Arguments: --nthreads 4
[2024-06-21 05:14:35] Threads: 4
[2024-06-21 05:14:35] Checking for CVMFS
[2024-06-21 05:14:35] No cvmfs_config command found, will try listing directly
[2024-06-21 05:14:35] CVMFS is ok
[2024-06-21 05:14:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 05:14:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 05:14:35] Further information can be found at the LHC@home message board.
[2024-06-21 05:14:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 05:14:35] Checking for apptainer binary...
[2024-06-21 05:14:35] which: no apptainer in ((null))
[2024-06-21 05:14:35] apptainer is not installed, using version from CVMFS
[2024-06-21 05:14:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 05:14:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-21 05:14:37] apptainer works
[2024-06-21 05:14:37] Set ATHENA_PROC_NUMBER=4
[2024-06-21 05:14:37] Set ATHENA_CORE_NUMBER=4
[2024-06-21 05:14:37] Starting ATLAS job with PandaID=6238943831
[2024-06-21 05:14:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 10:45:56]  *** The last 200 lines of the pilot log: ***
[2024-06-21 10:45:56] 2024-06-21 08:45:41,273 | INFO     | chi2: 4.513608774227291
[2024-06-21 10:45:56] 2024-06-21 08:45:41,274 | INFO     | model: linear, x: [1718939721.0, 1718939782.0, 1718939843.0, 1718939904.0, 1718939965.0, 1718940026.0, 1718940087.0, 1718940148.0, 1718940209.0, 1718940270.0, 1718
[2024-06-21 10:45:56] 2024-06-21 08:45:41,274 | INFO     | sum of square deviations: 10160711440.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,277 | INFO     | sum of deviations: 148176664589.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,278 | INFO     | mean x: 1718949450.5
[2024-06-21 10:45:56] 2024-06-21 08:45:41,278 | INFO     | mean y: 2326138.9625
[2024-06-21 10:45:56] 2024-06-21 08:45:41,278 | INFO     | -- intersect: -25065622860.10723
[2024-06-21 10:45:56] 2024-06-21 08:45:41,278 | INFO     | intersect: -25065622860.10723
[2024-06-21 10:45:56] 2024-06-21 08:45:41,279 | INFO     | chi2: 4.515125062590989
[2024-06-21 10:45:56] 2024-06-21 08:45:41,279 | INFO     | current chi2=4.515125062590989 (change=-0.033593703830865664 %)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,279 | INFO     | right removable region: 319
[2024-06-21 10:45:56] 2024-06-21 08:45:41,279 | INFO     | model: linear, x: [1718940026.0, 1718940087.0, 1718940148.0, 1718940209.0, 1718940270.0, 1718940331.0, 1718940392.0, 1718940453.0, 1718940514.0, 1718940575.0, 1718
[2024-06-21 10:45:56] 2024-06-21 08:45:41,280 | INFO     | sum of square deviations: 10160711440.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,283 | INFO     | sum of deviations: 75763433164.50002
[2024-06-21 10:45:56] 2024-06-21 08:45:41,283 | INFO     | mean x: 1718949755.5
[2024-06-21 10:45:56] 2024-06-21 08:45:41,283 | INFO     | mean y: 2350492.521875
[2024-06-21 10:45:56] 2024-06-21 08:45:41,283 | INFO     | -- intersect: -12815013299.669224
[2024-06-21 10:45:56] 2024-06-21 08:45:41,283 | INFO     | intersect: -12815013299.669224
[2024-06-21 10:45:56] 2024-06-21 08:45:41,284 | INFO     | chi2: 2.100750623102756
[2024-06-21 10:45:56] 2024-06-21 08:45:41,284 | INFO     | current chi2=2.100750623102756 (change=53.45740563298167 %)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,285 | INFO     | model: linear, x: [1718940331.0, 1718940392.0, 1718940453.0, 1718940514.0, 1718940575.0, 1718940636.0, 1718940697.0, 1718940758.0, 1718940819.0, 1718940880.0, 1718
[2024-06-21 10:45:56] 2024-06-21 08:45:41,285 | INFO     | sum of square deviations: 9691828230.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,288 | INFO     | sum of deviations: 10699289102.000002
[2024-06-21 10:45:56] 2024-06-21 08:45:41,288 | INFO     | mean x: 1718949908.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,288 | INFO     | mean y: 2371654.479365079
[2024-06-21 10:45:56] 2024-06-21 08:45:41,288 | INFO     | -- intersect: -1895262267.7376308
[2024-06-21 10:45:56] 2024-06-21 08:45:41,288 | INFO     | intersect: -1895262267.7376308
[2024-06-21 10:45:56] 2024-06-21 08:45:41,289 | INFO     | chi2: 0.44146340110990345
[2024-06-21 10:45:56] 2024-06-21 08:45:41,289 | INFO     | current chi2=0.44146340110990345 (change=78.98544471414351 %)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,289 | INFO     | model: linear, x: [1718940636.0, 1718940697.0, 1718940758.0, 1718940819.0, 1718940880.0, 1718940941.0, 1718941002.0, 1718941063.0, 1718941124.0, 1718941185.0, 1718
[2024-06-21 10:45:56] 2024-06-21 08:45:41,290 | INFO     | sum of square deviations: 9237596457.5
[2024-06-21 10:45:56] 2024-06-21 08:45:41,292 | INFO     | sum of deviations: -13519159099.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,293 | INFO     | mean x: 1718950060.5
[2024-06-21 10:45:56] 2024-06-21 08:45:41,293 | INFO     | mean y: 2379723.6580645163
[2024-06-21 10:45:56] 2024-06-21 08:45:41,293 | INFO     | -- intersect: 2518051355.131816
[2024-06-21 10:45:56] 2024-06-21 08:45:41,293 | INFO     | intersect: 2518051355.131816
[2024-06-21 10:45:56] 2024-06-21 08:45:41,293 | INFO     | chi2: 0.02216098414857187
[2024-06-21 10:45:56] 2024-06-21 08:45:41,294 | INFO     | current chi2=0.02216098414857187 (change=94.98010840924618 %)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,294 | INFO     | model: linear, x: [1718940941.0, 1718941002.0, 1718941063.0, 1718941124.0, 1718941185.0, 1718941246.0, 1718941307.0, 1718941368.0, 1718941429.0, 1718941490.0, 1718
[2024-06-21 10:45:56] 2024-06-21 08:45:41,294 | INFO     | sum of square deviations: 8797783560.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,297 | INFO     | sum of deviations: -12923617685.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,297 | INFO     | mean x: 1718950213.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,297 | INFO     | mean y: 2379515.3836065573
[2024-06-21 10:45:56] 2024-06-21 08:45:41,297 | INFO     | -- intersect: 2527453611.700806
[2024-06-21 10:45:56] 2024-06-21 08:45:41,297 | INFO     | intersect: 2527453611.700806
[2024-06-21 10:45:56] 2024-06-21 08:45:41,298 | INFO     | chi2: 0.022022258611265454
[2024-06-21 10:45:56] 2024-06-21 08:45:41,298 | INFO     | current chi2=0.022022258611265454 (change=0.6259899667648889 %)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,298 | INFO     | left removable region: 40
[2024-06-21 10:45:56] 2024-06-21 08:45:41,299 | INFO     | model: linear, x: [1718942161.0, 1718942222.0, 1718942283.0, 1718942344.0, 1718942405.0, 1718942466.0, 1718942527.0, 1718942588.0, 1718942649.0, 1718942710.0, 1718
[2024-06-21 10:45:56] 2024-06-21 08:45:41,299 | INFO     | sum of square deviations: 6734191380.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,301 | INFO     | sum of deviations: -5049542119.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,301 | INFO     | mean x: 1718950640.0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,301 | INFO     | mean y: 2376482.5555555555
[2024-06-21 10:45:56] 2024-06-21 08:45:41,302 | INFO     | -- intersect: 1291308318.2234046
[2024-06-21 10:45:56] 2024-06-21 08:45:41,302 | INFO     | intersect: 1291308318.2234046
[2024-06-21 10:45:56] 2024-06-21 08:45:41,302 | INFO     | chi2: 0.01739748649600203
[2024-06-21 10:45:56] 2024-06-21 08:45:41,302 | INFO     | -- intersect: 1291308318.2234046
[2024-06-21 10:45:56] 2024-06-21 08:45:41,303 | INFO     | current memory leak: -0.75 B/s (using 279 data points, chi2=0.02)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,303 | INFO     | ..............................
[2024-06-21 10:45:56] 2024-06-21 08:45:41,303 | INFO     | . Timing measurements:
[2024-06-21 10:45:56] 2024-06-21 08:45:41,303 | INFO     | . get job = 0 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | . initial setup = 1 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | . payload setup = 7 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | . stage-in = 0 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | . payload execution = 19814 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | . stage-out = 0 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | . log creation = 0 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,304 | INFO     | ..............................
[2024-06-21 10:45:56] 2024-06-21 08:45:41,369 | WARNING  | process 1329964 is no longer using CPU - aborting
[2024-06-21 10:45:56] 2024-06-21 08:45:41,379 | INFO     | aborting job monitoring since job object (job id=6238943831) has expired
[2024-06-21 10:45:56] 2024-06-21 08:45:41,388 | INFO     | 
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | job summary report
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | --------------------------------------------------
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | PanDA job id: 6238943831
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | task id: 40024023
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | errors: (none)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | pilot state: finished 
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | transexitcode: 0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | exeerrorcode: 0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | exeerrordiag: 
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | exitcode: 0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | exitmsg: OK
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | cpuconsumptiontime: 75467 s
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | nevents: 400
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | neventsw: 0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | pid: 1329964
[2024-06-21 10:45:56] 2024-06-21 08:45:41,389 | INFO     | pgrp: 1329964
[2024-06-21 10:45:56] 2024-06-21 08:45:41,390 | INFO     | corecount: 4
[2024-06-21 10:45:56] 2024-06-21 08:45:41,390 | INFO     | event service: False
[2024-06-21 10:45:56] 2024-06-21 08:45:41,390 | INFO     | sizes: {0: 2386845, 7: 2387051, 11: 2387079, 19826: 2420069, 19829: 2429051, 19831: 2429107, 19836: 2429405}
[2024-06-21 10:45:56] 2024-06-21 08:45:41,390 | INFO     | --------------------------------------------------
[2024-06-21 10:45:56] 2024-06-21 08:45:41,390 | INFO     | 
[2024-06-21 10:45:56] 2024-06-21 08:45:41,390 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-06-21 10:45:56] 2024-06-21 08:45:41,404 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,404 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,404 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,405 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,406 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 10:45:56] 2024-06-21 08:45:41,406 | INFO     | job 6238943831 has completed (purged errors)
[2024-06-21 10:45:56] 2024-06-21 08:45:41,406 | INFO     | overall cleanup function is called
[2024-06-21 10:45:56] 2024-06-21 08:45:42,413 | INFO     | --- collectZombieJob: --- 10, [1329964]
[2024-06-21 10:45:56] 2024-06-21 08:45:42,413 | INFO     | zombie collector waiting for pid 1329964
[2024-06-21 10:45:56] 2024-06-21 08:45:42,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 10:45:56] 2024-06-21 08:45:43,418 | INFO     | collected zombie processes
[2024-06-21 10:45:56] 2024-06-21 08:45:43,418 | INFO     | will now attempt to kill all subprocesses of pid=1329964
[2024-06-21 10:45:56] 2024-06-21 08:45:43,509 | INFO     | process IDs to be killed: [1329964] (in reverse order)
[2024-06-21 10:45:56] 2024-06-21 08:45:43,600 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 10:45:56] 2024-06-21 08:45:43,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 10:45:56] 2024-06-21 08:45:43,606 | INFO     | did not find any defunct processes belonging to 1329964
[2024-06-21 10:45:56] 2024-06-21 08:45:43,611 | INFO     | did not find any defunct processes belonging to 1329964
[2024-06-21 10:45:56] 2024-06-21 08:45:43,612 | INFO     | ready for new job
[2024-06-21 10:45:56] 2024-06-21 08:45:43,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 10:45:56] 2024-06-21 08:45:43,614 | INFO     | *************************************
[2024-06-21 10:45:56] 2024-06-21 08:45:43,614 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 10:45:56] 2024-06-21 08:45:43,614 | INFO     | *************************************
[2024-06-21 10:45:56] 2024-06-21 08:45:43,614 | INFO     | 
[2024-06-21 10:45:56] 2024-06-21 08:45:43,617 | INFO     | architecture information:
[2024-06-21 10:45:56] 2024-06-21 08:45:43,617 | INFO     | executing command: cat /etc/os-release
[2024-06-21 10:45:56] 2024-06-21 08:45:43,630 | INFO     | cat /etc/os-release:
[2024-06-21 10:45:56] NAME="CentOS Linux"
[2024-06-21 10:45:56] VERSION="7 (Core)"
[2024-06-21 10:45:56] ID="centos"
[2024-06-21 10:45:56] ID_LIKE="rhel fedora"
[2024-06-21 10:45:56] VERSION_ID="7"
[2024-06-21 10:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 10:45:56] ANSI_COLOR="0;31"
[2024-06-21 10:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 10:45:56] HOME_URL="https://www.centos.org/"
[2024-06-21 10:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 10:45:56] 
[2024-06-21 10:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 10:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 10:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 10:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 10:45:56] 
[2024-06-21 10:45:56] 2024-06-21 08:45:43,630 | INFO     | *************************************
[2024-06-21 10:45:56] 2024-06-21 08:45:44,133 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-06-21 10:45:56] 2024-06-21 08:45:44,150 | INFO     | sufficient remaining disk space (1663153733632 B)
[2024-06-21 10:45:56] 2024-06-21 08:45:44,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 10:45:56] 2024-06-21 08:45:44,151 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 10:45:56] 2024-06-21 08:45:44,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 10:45:56] 2024-06-21 08:45:44,430 | INFO     | all payload control threads have been joined
[2024-06-21 10:45:56] 2024-06-21 08:45:44,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:45:56] 2024-06-21 08:45:44,896 | INFO     | aborting loop
[2024-06-21 10:45:56] 2024-06-21 08:45:44,971 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 10:45:56] 2024-06-21 08:45:44,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 10:45:56] 2024-06-21 08:45:44,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 10:45:56] 2024-06-21 08:45:45,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 10:45:56] 2024-06-21 08:45:45,034 | INFO     | all data control threads have been joined
[2024-06-21 10:45:56] 2024-06-21 08:45:45,156 | INFO     | [job] retrieve thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,435 | INFO     | [payload] control thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,491 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,515 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,681 | INFO     | [job] validate thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,843 | INFO     | all job control threads have been joined
[2024-06-21 10:45:56] 2024-06-21 08:45:45,868 | INFO     | [payload] validate_post thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,871 | INFO     | [payload] failed_post thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:45,901 | INFO     | [job] job monitor thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:46,039 | INFO     | [data] control thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:46,178 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:46,287 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:46,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 10:45:56] 2024-06-21 08:45:46,633 | INFO     | [data] copytool_in thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:46,847 | INFO     | [job] control thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:47,024 | INFO     | [data] copytool_out thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:47,400 | INFO     | [job] queue monitor thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:48,157 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 10:45:56] 2024-06-21 08:45:50,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47202866123840)>', '<ExcThread(monitor, started 47203052701440)>']
[2024-06-21 10:45:56] 2024-06-21 08:45:51,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 10:45:56] 2024-06-21 08:45:51,002 | INFO     | [monitor] control thread has ended
[2024-06-21 10:45:56] 2024-06-21 08:45:55,088 | INFO     | all workflow threads have been joined
[2024-06-21 10:45:56] 2024-06-21 08:45:55,088 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 10:45:56] 2024-06-21 08:45:55,088 | INFO     | traces error code: 0
[2024-06-21 10:45:56] 2024-06-21 08:45:55,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 10:45:56] 2024-06-21 08:45:55,262 [wrapper] ==== pilot stdout END ====
[2024-06-21 10:45:56] 2024-06-21 08:45:55,264 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 10:45:56] 2024-06-21 08:45:55,268 [wrapper] pilotpid: 1321123
[2024-06-21 10:45:56] 2024-06-21 08:45:55,270 [wrapper] Pilot exit status: 0
[2024-06-21 10:45:56] 2024-06-21 08:45:55,281 [wrapper] pandaids: 6238943831
[2024-06-21 10:45:56] 2024-06-21 08:45:55,317 [wrapper] cleanup supervisor_pilot 1815747 1321124
[2024-06-21 10:45:56] 2024-06-21 08:45:55,320 [wrapper] Test setup, not cleaning
[2024-06-21 10:45:56] 2024-06-21 08:45:55,324 [wrapper] ==== wrapper stdout END ====
[2024-06-21 10:45:56] 2024-06-21 08:45:55,326 [wrapper] ==== wrapper stderr END ====
[2024-06-21 10:45:56] 2024-06-21 08:45:55,332 [wrapper] apfmon messages muted
[2024-06-21 10:45:56]  *** Error codes and diagnostics ***
[2024-06-21 10:45:56]     "exeErrorCode": 0,
[2024-06-21 10:45:56]     "exeErrorDiag": "",
[2024-06-21 10:45:56]     "pilotErrorCode": 0,
[2024-06-21 10:45:56]     "pilotErrorDiag": "",
[2024-06-21 10:45:56]  *** Listing of results directory ***
[2024-06-21 10:45:56] total 840132
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:25 pilot3.tar.gz
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:41 queuedata.json
[2024-06-21 10:45:56] -rwx------ 1 boinc boinc     32308 Jun 20 17:42 runpilot2-wrapper.sh
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc       100 Jun 21 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 10:45:56] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 05:14 run_atlas
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc       105 Jun 21 05:14 job.xml
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc      6454 Jun 21 05:14 init_data.xml
[2024-06-21 10:45:56] -rw-r--r-- 2 boinc boinc 595804164 Jun 21 05:14 EVNT.40024021._000021.pool.root.1
[2024-06-21 10:45:56] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:14 start_atlas.sh
[2024-06-21 10:45:56] drwxrwx--x 2 boinc boinc      4096 Jun 21 05:14 shared
[2024-06-21 10:45:56] -rw-r--r-- 2 boinc boinc    482484 Jun 21 05:14 input.tar.gz
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc         0 Jun 21 05:14 boinc_lockfile
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc      2517 Jun 21 05:14 pandaJob.out
[2024-06-21 10:45:56] -rw------- 1 boinc boinc       424 Jun 21 05:14 setup.sh.local
[2024-06-21 10:45:56] -rw------- 1 boinc boinc   1024126 Jun 21 05:14 agis_schedconf.cvmfs.json
[2024-06-21 10:45:56] -rw------- 1 boinc boinc   1321251 Jun 21 05:14 cric_ddmendpoints.json
[2024-06-21 10:45:56] drwx------ 4 boinc boinc      4096 Jun 21 05:14 pilot3
[2024-06-21 10:45:56] -rw------- 1 boinc boinc        95 Jun 21 10:44 pilot_heartbeat.json
[2024-06-21 10:45:56] -rw------- 1 boinc boinc 256046151 Jun 21 10:44 HITS.40024023._001106.pool.root.1
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc        28 Jun 21 10:45 wrapper_checkpoint.txt
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc      8192 Jun 21 10:45 boinc_mmap_file
[2024-06-21 10:45:56] -rw------- 1 boinc boinc      1040 Jun 21 10:45 memory_monitor_summary.json
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc       531 Jun 21 10:45 boinc_task_state.xml
[2024-06-21 10:45:56] -rw------- 1 boinc boinc         0 Jun 21 10:45 agis_ddmendpoints.agis.ALL.json
[2024-06-21 10:45:56] -rw------- 1 boinc boinc    390455 Jun 21 10:45 log.40024023._001106.job.log.tgz.1
[2024-06-21 10:45:56] -rw------- 1 boinc boinc      7760 Jun 21 10:45 heartbeat.json
[2024-06-21 10:45:56] -rw------- 1 boinc boinc      4222 Jun 21 10:45 pilotlog.txt
[2024-06-21 10:45:56] -rw------- 1 boinc boinc   2061507 Jun 21 10:45 log.40024023._001106.job.log.1
[2024-06-21 10:45:56] -rw------- 1 boinc boinc       357 Jun 21 10:45 output.list
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc       620 Jun 21 10:45 runtime_log
[2024-06-21 10:45:56] -rw------- 1 boinc boinc   2467840 Jun 21 10:45 result.tar.gz
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc     11410 Jun 21 10:45 runtime_log.err
[2024-06-21 10:45:56] -rw------- 1 boinc boinc       660 Jun 21 10:45 khyLDmr6Ye5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm1elKDmijhBMn.diag
[2024-06-21 10:45:56] -rw-r--r-- 1 boinc boinc     21332 Jun 21 10:45 stderr.txt
[2024-06-21 10:45:56] HITS file was successfully produced:
[2024-06-21 10:45:56] -rw------- 1 boinc boinc 256046151 Jun 21 10:44 shared/HITS.pool.root.1
[2024-06-21 10:45:56]  *** Contents of shared directory: ***
[2024-06-21 10:45:56] total 834804
[2024-06-21 10:45:56] -rw-r--r-- 2 boinc boinc 595804164 Jun 21 05:14 ATLAS.root_0
[2024-06-21 10:45:56] -rw-r--r-- 2 boinc boinc     17537 Jun 21 05:14 start_atlas.sh
[2024-06-21 10:45:56] -rw-r--r-- 2 boinc boinc    482484 Jun 21 05:14 input.tar.gz
[2024-06-21 10:45:56] -rw------- 1 boinc boinc 256046151 Jun 21 10:44 HITS.pool.root.1
[2024-06-21 10:45:56] -rw------- 1 boinc boinc   2467840 Jun 21 10:45 result.tar.gz
10:45:58 (1316896): run_atlas exited; CPU time 75271.482409
10:45:58 (1316896): called boinc_finish(0)

</stderr_txt>
]]>

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