Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:57:40 (1353342): wrapper (7.7.26015): starting
00:57:40 (1353342): wrapper: running run_atlas (--nthreads 4)
[2024-06-22 00:57:40] Arguments: --nthreads 4
[2024-06-22 00:57:40] Threads: 4
[2024-06-22 00:57:40] Checking for CVMFS
[2024-06-22 00:57:40] No cvmfs_config command found, will try listing directly
[2024-06-22 00:57:40] CVMFS is ok
[2024-06-22 00:57:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-22 00:57:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-22 00:57:40] Further information can be found at the LHC@home message board.
[2024-06-22 00:57:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-22 00:57:40] Checking for apptainer binary...
[2024-06-22 00:57:40] which: no apptainer in ((null))
[2024-06-22 00:57:40] apptainer is not installed, using version from CVMFS
[2024-06-22 00:57:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-22 00:57:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-22 00:57:41] apptainer works
[2024-06-22 00:57:41] Set ATHENA_PROC_NUMBER=4
[2024-06-22 00:57:41] Set ATHENA_CORE_NUMBER=4
[2024-06-22 00:57:42] Starting ATLAS job with PandaID=6238919572
[2024-06-22 00:57:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-22 04:47:08]  *** The last 200 lines of the pilot log: ***
[2024-06-22 04:47:08] 2024-06-22 02:46:52,333 | INFO     | -- intersect: -29104249557.151276
[2024-06-22 04:47:08] 2024-06-22 02:46:52,333 | INFO     | intersect: -29104249557.151276
[2024-06-22 04:47:08] 2024-06-22 02:46:52,334 | INFO     | chi2: 1.4943914820356161
[2024-06-22 04:47:08] 2024-06-22 02:46:52,334 | INFO     | current chi2=1.4943914820356161 (change=62.72767975061887 %)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,334 | INFO     | model: linear, x: [1719011366.0, 1719011427.0, 1719011488.0, 1719011549.0, 1719011610.0, 1719011671.0, 1719011732.0, 1719011793.0, 1719011854.0, 1719011915.0, 1719
[2024-06-22 04:47:08] 2024-06-22 02:46:52,334 | INFO     | sum of square deviations: 3038856977.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,335 | INFO     | sum of deviations: 13066189843.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | mean x: 1719017862.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | mean y: 2366144.3691588785
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | -- intersect: -7388904291.2242775
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | intersect: -7388904291.2242775
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | chi2: 0.03774769765046808
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | current chi2=0.03774769765046808 (change=97.47404223697467 %)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,336 | INFO     | model: linear, x: [1719011671.0, 1719011732.0, 1719011793.0, 1719011854.0, 1719011915.0, 1719011976.0, 1719012037.0, 1719012098.0, 1719012159.0, 1719012220.0, 1719
[2024-06-22 04:47:08] 2024-06-22 02:46:52,337 | INFO     | sum of square deviations: 2830787960.0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,338 | INFO     | sum of deviations: 8648251759.000002
[2024-06-22 04:47:08] 2024-06-22 02:46:52,338 | INFO     | mean x: 1719018015.0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,338 | INFO     | mean y: 2369338.550239234
[2024-06-22 04:47:08] 2024-06-22 02:46:52,338 | INFO     | -- intersect: -5249348833.932181
[2024-06-22 04:47:08] 2024-06-22 02:46:52,338 | INFO     | intersect: -5249348833.932181
[2024-06-22 04:47:08] 2024-06-22 02:46:52,339 | INFO     | chi2: 0.0035526225108148198
[2024-06-22 04:47:08] 2024-06-22 02:46:52,339 | INFO     | current chi2=0.0035526225108148198 (change=90.58850544022314 %)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,339 | INFO     | model: linear, x: [1719011976.0, 1719012037.0, 1719012098.0, 1719012159.0, 1719012220.0, 1719012281.0, 1719012342.0, 1719012403.0, 1719012464.0, 1719012525.0, 1719
[2024-06-22 04:47:08] 2024-06-22 02:46:52,339 | INFO     | sum of square deviations: 2632440055.0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,340 | INFO     | sum of deviations: 6696389039.500001
[2024-06-22 04:47:08] 2024-06-22 02:46:52,340 | INFO     | mean x: 1719018167.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | mean y: 2370837.6911764704
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | -- intersect: -4370459758.653923
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | intersect: -4370459758.653923
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | chi2: 0.001756987649704967
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | current chi2=0.001756987649704967 (change=50.54392510444379 %)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | model: linear, x: [1719012281.0, 1719012342.0, 1719012403.0, 1719012464.0, 1719012525.0, 1719012586.0, 1719012647.0, 1719012708.0, 1719012769.0, 1719012830.0, 1719
[2024-06-22 04:47:08] 2024-06-22 02:46:52,341 | INFO     | sum of square deviations: 2443580700.0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | sum of deviations: 5446014242.000002
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | mean x: 1719018320.0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | mean y: 2371845.4572864324
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | -- intersect: -3828808460.1405263
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | intersect: -3828808460.1405263
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | chi2: 0.0011120642076666047
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | current chi2=0.0011120642076666047 (change=36.70620235416326 %)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | model: linear, x: [1719012586.0, 1719012647.0, 1719012708.0, 1719012769.0, 1719012830.0, 1719012891.0, 1719012952.0, 1719013013.0, 1719013074.0, 1719013135.0, 1719
[2024-06-22 04:47:08] 2024-06-22 02:46:52,343 | INFO     | sum of square deviations: 2263977332.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | sum of deviations: 4620398457.0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | mean x: 1719018472.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | mean y: 2372544.9278350514
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | -- intersect: -3505856174.448487
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | intersect: -3505856174.448487
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | chi2: 0.000894829149640016
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | current chi2=0.000894829149640016 (change=19.534398870943203 %)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | left removable region: 60
[2024-06-22 04:47:08] 2024-06-22 02:46:52,345 | INFO     | model: linear, x: [1719014416.0, 1719014477.0, 1719014538.0, 1719014599.0, 1719014660.0, 1719014721.0, 1719014782.0, 1719014843.0, 1719014904.0, 1719014965.0, 1719
[2024-06-22 04:47:08] 2024-06-22 02:46:52,346 | INFO     | sum of square deviations: 1223016419.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,346 | INFO     | sum of deviations: 1281714035.4999998
[2024-06-22 04:47:08] 2024-06-22 02:46:52,346 | INFO     | mean x: 1719019204.5
[2024-06-22 04:47:08] 2024-06-22 02:46:52,346 | INFO     | mean y: 2375291.082278481
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | -- intersect: -1799146754.3882601
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | intersect: -1799146754.3882601
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | chi2: 0.00034172281878193313
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | -- intersect: -1799146754.3882601
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | current memory leak: 1.05 B/s (using 158 data points, chi2=0.00)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | ..............................
[2024-06-22 04:47:08] 2024-06-22 02:46:52,347 | INFO     | . Timing measurements:
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . get job = 0 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . initial setup = 1 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . payload setup = 18 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . stage-in = 0 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . payload execution = 13646 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . stage-out = 0 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | . log creation = 0 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,348 | INFO     | ..............................
[2024-06-22 04:47:08] 2024-06-22 02:46:52,437 | INFO     | 
[2024-06-22 04:47:08] 2024-06-22 02:46:52,437 | INFO     | job summary report
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | --------------------------------------------------
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | PanDA job id: 6238919572
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | task id: 40024040
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | errors: (none)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | pilot state: finished 
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | transexitcode: 0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | exeerrorcode: 0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | exeerrordiag: 
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | exitcode: 0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | exitmsg: OK
[2024-06-22 04:47:08] 2024-06-22 02:46:52,438 | INFO     | cpuconsumptiontime: 51570 s
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | nevents: 400
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | neventsw: 0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | pid: 1368628
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | pgrp: 1368628
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | corecount: 4
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | event service: False
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | sizes: {0: 2386701, 1: 2386900, 11: 2386900, 15: 2387134, 22: 2387162, 13669: 2417383, 13671: 2426367, 13672: 2426423, 13686: 2426593}
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | --------------------------------------------------
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | 
[2024-06-22 04:47:08] 2024-06-22 02:46:52,439 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-22 04:47:08] 2024-06-22 02:46:52,473 | INFO     | job 6238919572 has completed (purged errors)
[2024-06-22 04:47:08] 2024-06-22 02:46:52,474 | INFO     | overall cleanup function is called
[2024-06-22 04:47:08] 2024-06-22 02:46:53,480 | INFO     | --- collectZombieJob: --- 10, [1368628]
[2024-06-22 04:47:08] 2024-06-22 02:46:53,481 | INFO     | zombie collector waiting for pid 1368628
[2024-06-22 04:47:08] 2024-06-22 02:46:53,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-22 04:47:08] 2024-06-22 02:46:54,485 | INFO     | collected zombie processes
[2024-06-22 04:47:08] 2024-06-22 02:46:54,486 | INFO     | will now attempt to kill all subprocesses of pid=1368628
[2024-06-22 04:47:08] 2024-06-22 02:46:54,714 | INFO     | process IDs to be killed: [1368628] (in reverse order)
[2024-06-22 04:47:08] 2024-06-22 02:46:54,908 | WARNING  | found no corresponding commands to process id(s)
[2024-06-22 04:47:08] 2024-06-22 02:46:54,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-22 04:47:08] 2024-06-22 02:46:54,923 | INFO     | did not find any defunct processes belonging to 1368628
[2024-06-22 04:47:08] 2024-06-22 02:46:54,932 | INFO     | did not find any defunct processes belonging to 1368628
[2024-06-22 04:47:08] 2024-06-22 02:46:54,933 | INFO     | ready for new job
[2024-06-22 04:47:08] 2024-06-22 02:46:54,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-22 04:47:08] 2024-06-22 02:46:54,934 | INFO     | *************************************
[2024-06-22 04:47:08] 2024-06-22 02:46:54,934 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-22 04:47:08] 2024-06-22 02:46:54,934 | INFO     | *************************************
[2024-06-22 04:47:08] 2024-06-22 02:46:54,934 | INFO     | 
[2024-06-22 04:47:08] 2024-06-22 02:46:54,940 | INFO     | architecture information:
[2024-06-22 04:47:08] 2024-06-22 02:46:54,940 | INFO     | executing command: cat /etc/os-release
[2024-06-22 04:47:08] 2024-06-22 02:46:54,954 | INFO     | cat /etc/os-release:
[2024-06-22 04:47:08] NAME="CentOS Linux"
[2024-06-22 04:47:08] VERSION="7 (Core)"
[2024-06-22 04:47:08] ID="centos"
[2024-06-22 04:47:08] ID_LIKE="rhel fedora"
[2024-06-22 04:47:08] VERSION_ID="7"
[2024-06-22 04:47:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-22 04:47:08] ANSI_COLOR="0;31"
[2024-06-22 04:47:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-22 04:47:08] HOME_URL="https://www.centos.org/"
[2024-06-22 04:47:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-22 04:47:08] 
[2024-06-22 04:47:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-22 04:47:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-22 04:47:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-22 04:47:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-22 04:47:08] 
[2024-06-22 04:47:08] 2024-06-22 02:46:54,954 | INFO     | *************************************
[2024-06-22 04:47:08] 2024-06-22 02:46:55,457 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2024-06-22 04:47:08] 2024-06-22 02:46:55,481 | INFO     | sufficient remaining disk space (3256588697600 B)
[2024-06-22 04:47:08] 2024-06-22 02:46:55,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-22 04:47:08] 2024-06-22 02:46:55,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-22 04:47:08] 2024-06-22 02:46:55,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-22 04:47:08] 2024-06-22 02:46:55,601 | INFO     | all payload control threads have been joined
[2024-06-22 04:47:08] 2024-06-22 02:46:55,879 | INFO     | found 0 job(s) in 20 queues
[2024-06-22 04:47:08] 2024-06-22 02:46:55,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-22 04:47:08] 2024-06-22 02:46:55,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-22 04:47:08] 2024-06-22 02:46:56,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-22 04:47:08] 2024-06-22 02:46:56,396 | INFO     | aborting loop
[2024-06-22 04:47:08] 2024-06-22 02:46:56,428 | INFO     | all data control threads have been joined
[2024-06-22 04:47:08] 2024-06-22 02:46:56,487 | INFO     | [job] retrieve thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:56,606 | INFO     | [payload] control thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:56,673 | INFO     | all job control threads have been joined
[2024-06-22 04:47:08] 2024-06-22 02:46:56,816 | INFO     | [payload] validate_post thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:56,891 | INFO     | [payload] execute_payloads thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,267 | INFO     | [payload] validate_pre thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,308 | INFO     | [job] validate thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,347 | INFO     | [payload] failed_post thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,349 | INFO     | [job] create_data_payload thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,400 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,401 | INFO     | [job] job monitor thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,433 | INFO     | [data] control thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-22 04:47:08] 2024-06-22 02:46:57,488 | INFO     | [data] copytool_out thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,679 | INFO     | [job] control thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,852 | INFO     | [data] copytool_in thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:46:57,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-22 04:47:08] 2024-06-22 02:46:58,452 | INFO     | [job] queue monitor thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:47:01,894 | INFO     | [data] queue_monitor thread has finished
[2024-06-22 04:47:08] 2024-06-22 02:47:02,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47524758725696)>', '<ExcThread(monitor, started 47524943202048)>']
[2024-06-22 04:47:08] 2024-06-22 02:47:02,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-22 04:47:08] 2024-06-22 02:47:02,917 | INFO     | [monitor] control thread has ended
[2024-06-22 04:47:08] 2024-06-22 02:47:07,785 | INFO     | all workflow threads have been joined
[2024-06-22 04:47:08] 2024-06-22 02:47:07,785 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-22 04:47:08] 2024-06-22 02:47:07,785 | INFO     | traces error code: 0
[2024-06-22 04:47:08] 2024-06-22 02:47:07,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-22 04:47:08] 2024-06-22 02:47:07,913 [wrapper] ==== pilot stdout END ====
[2024-06-22 04:47:08] 2024-06-22 02:47:07,916 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-22 04:47:08] 2024-06-22 02:47:07,919 [wrapper] pilotpid: 1360689
[2024-06-22 04:47:08] 2024-06-22 02:47:07,924 [wrapper] Pilot exit status: 0
[2024-06-22 04:47:08] 2024-06-22 02:47:07,978 [wrapper] pandaids: 6238919572
[2024-06-22 04:47:08] 2024-06-22 02:47:08,096 [wrapper] cleanup supervisor_pilot 2451299 1360690
[2024-06-22 04:47:08] 2024-06-22 02:47:08,100 [wrapper] Test setup, not cleaning
[2024-06-22 04:47:08] 2024-06-22 02:47:08,102 [wrapper] ==== wrapper stdout END ====
[2024-06-22 04:47:08] 2024-06-22 02:47:08,123 [wrapper] ==== wrapper stderr END ====
[2024-06-22 04:47:08] 2024-06-22 02:47:08,161 [wrapper] apfmon messages muted
[2024-06-22 04:47:08]  *** Error codes and diagnostics ***
[2024-06-22 04:47:08]     "exeErrorCode": 0,
[2024-06-22 04:47:08]     "exeErrorDiag": "",
[2024-06-22 04:47:08]     "pilotErrorCode": 0,
[2024-06-22 04:47:08]     "pilotErrorDiag": "",
[2024-06-22 04:47:08]  *** Listing of results directory ***
[2024-06-22 04:47:08] total 868760
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:25 pilot3.tar.gz
[2024-06-22 04:47:08] -rwx------ 1 boinc boinc     32308 Jun 20 17:26 runpilot2-wrapper.sh
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:33 queuedata.json
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc       100 Jun 22 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-22 04:47:08] -rwxr-xr-x 1 boinc boinc      7986 Jun 22 00:57 run_atlas
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc       105 Jun 22 00:57 job.xml
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc      6644 Jun 22 00:57 init_data.xml
[2024-06-22 04:47:08] -rw-r--r-- 2 boinc boinc 615176783 Jun 22 00:57 EVNT.40024038._000027.pool.root.1
[2024-06-22 04:47:08] -rw-r--r-- 2 boinc boinc     17537 Jun 22 00:57 start_atlas.sh
[2024-06-22 04:47:08] drwxrwx--x 2 boinc boinc      4096 Jun 22 00:57 shared
[2024-06-22 04:47:08] -rw-r--r-- 2 boinc boinc    482468 Jun 22 00:57 input.tar.gz
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc         0 Jun 22 00:57 boinc_lockfile
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc      2483 Jun 22 00:57 pandaJob.out
[2024-06-22 04:47:08] -rw------- 1 boinc boinc       424 Jun 22 00:57 setup.sh.local
[2024-06-22 04:47:08] -rw------- 1 boinc boinc   1025632 Jun 22 00:58 agis_schedconf.cvmfs.json
[2024-06-22 04:47:08] -rw------- 1 boinc boinc   1321363 Jun 22 00:58 cric_ddmendpoints.json
[2024-06-22 04:47:08] drwx------ 4 boinc boinc      4096 Jun 22 00:58 pilot3
[2024-06-22 04:47:08] -rw------- 1 boinc boinc        95 Jun 22 04:45 pilot_heartbeat.json
[2024-06-22 04:47:08] -rw------- 1 boinc boinc 267451735 Jun 22 04:46 HITS.40024040._001031.pool.root.1
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc       531 Jun 22 04:46 boinc_task_state.xml
[2024-06-22 04:47:08] -rw------- 1 boinc boinc      1035 Jun 22 04:46 memory_monitor_summary.json
[2024-06-22 04:47:08] -rw------- 1 boinc boinc         0 Jun 22 04:46 agis_ddmendpoints.agis.ALL.json
[2024-06-22 04:47:08] -rw------- 1 boinc boinc    326981 Jun 22 04:46 log.40024040._001031.job.log.tgz.1
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc      8192 Jun 22 04:46 boinc_mmap_file
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc        28 Jun 22 04:46 wrapper_checkpoint.txt
[2024-06-22 04:47:08] -rw------- 1 boinc boinc      7707 Jun 22 04:46 heartbeat.json
[2024-06-22 04:47:08] -rw------- 1 boinc boinc      4223 Jun 22 04:47 pilotlog.txt
[2024-06-22 04:47:08] -rw------- 1 boinc boinc   1398331 Jun 22 04:47 log.40024040._001031.job.log.1
[2024-06-22 04:47:08] -rw------- 1 boinc boinc       357 Jun 22 04:47 output.list
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc       620 Jun 22 04:47 runtime_log
[2024-06-22 04:47:08] -rw------- 1 boinc boinc   1740800 Jun 22 04:47 result.tar.gz
[2024-06-22 04:47:08] -rw------- 1 boinc boinc       657 Jun 22 04:47 t6CMDmuqYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmqwqKDmX7Rwom.diag
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc     11429 Jun 22 04:47 runtime_log.err
[2024-06-22 04:47:08] -rw-r--r-- 1 boinc boinc     21373 Jun 22 04:47 stderr.txt
[2024-06-22 04:47:09] HITS file was successfully produced:
[2024-06-22 04:47:09] -rw------- 1 boinc boinc 267451735 Jun 22 04:46 shared/HITS.pool.root.1
[2024-06-22 04:47:09]  *** Contents of shared directory: ***
[2024-06-22 04:47:09] total 864144
[2024-06-22 04:47:09] -rw-r--r-- 2 boinc boinc 615176783 Jun 22 00:57 ATLAS.root_0
[2024-06-22 04:47:09] -rw-r--r-- 2 boinc boinc     17537 Jun 22 00:57 start_atlas.sh
[2024-06-22 04:47:09] -rw-r--r-- 2 boinc boinc    482468 Jun 22 00:57 input.tar.gz
[2024-06-22 04:47:09] -rw------- 1 boinc boinc 267451735 Jun 22 04:46 HITS.pool.root.1
[2024-06-22 04:47:09] -rw------- 1 boinc boinc   1740800 Jun 22 04:47 result.tar.gz
04:47:10 (1353342): run_atlas exited; CPU time 51277.938402
04:47:10 (1353342): called boinc_finish(0)

</stderr_txt>
]]>

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