Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:01:53 (49629): wrapper (7.7.26015): starting
16:01:53 (49629): wrapper: running run_atlas (--nthreads 8)
[2024-06-20 16:01:53] Arguments: --nthreads 8
[2024-06-20 16:01:53] Threads: 8
[2024-06-20 16:01:53] Checking for CVMFS
[2024-06-20 16:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-20 16:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-20 16:01:54] Running cvmfs_config stat atlas.cern.ch
[2024-06-20 16:01:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-20 16:01:54] 2.11.2.0 95880 21579 99320 134100 0 239 11911935 18432001 20438 130560 0 432404 99.526 444845 64573 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-20 16:01:54] CVMFS is ok
[2024-06-20 16:01:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-20 16:01:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-20 16:01:54] Further information can be found at the LHC@home message board.
[2024-06-20 16:01:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-20 16:01:54] Checking for apptainer binary...
[2024-06-20 16:01:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-20 16:01:54] Running /usr/bin/apptainer --version
[2024-06-20 16:01:55] apptainer version 1.3.1-1.el7
[2024-06-20 16:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-20 16:02:00] c-212-9.aglt2.org
[2024-06-20 16:02:00] apptainer works
[2024-06-20 16:02:01] Set ATHENA_PROC_NUMBER=8
[2024-06-20 16:02:01] Set ATHENA_CORE_NUMBER=8
[2024-06-20 16:02:01] Starting ATLAS job with PandaID=6238909372
[2024-06-20 16:02:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 01:42:44]  *** The last 200 lines of the pilot log: ***
[2024-06-21 01:42:44] 2024-06-21 05:42:20,209 | INFO     | model: linear, x: [1718914015.0, 1718914076.0, 1718914137.0, 1718914198.0, 1718914259.0, 1718914320.0, 1718914381.0, 1718914442.0, 1718914503.0, 1718914564.0, 1718
[2024-06-21 01:42:44] 2024-06-21 05:42:20,209 | INFO     | sum of square deviations: 54747663980.698975
[2024-06-21 01:42:44] 2024-06-21 05:42:20,214 | INFO     | sum of deviations: 473732303387.4364
[2024-06-21 01:42:44] 2024-06-21 05:42:20,214 | INFO     | mean x: 1718931095.0231729
[2024-06-21 01:42:44] 2024-06-21 05:42:20,215 | INFO     | mean y: 2498879.889483066
[2024-06-21 01:42:44] 2024-06-21 05:42:20,215 | INFO     | -- intersect: -14871435965.927834
[2024-06-21 01:42:44] 2024-06-21 05:42:20,215 | INFO     | intersect: -14871435965.927834
[2024-06-21 01:42:44] 2024-06-21 05:42:20,215 | INFO     | chi2: 6.343147928687584
[2024-06-21 01:42:44] 2024-06-21 05:42:20,215 | INFO     | current chi2=6.343147928687584 (change=11.085806440478576 %)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,215 | INFO     | right removable region: 560
[2024-06-21 01:42:44] 2024-06-21 05:42:20,216 | INFO     | model: linear, x: [1718914320.0, 1718914381.0, 1718914442.0, 1718914503.0, 1718914564.0, 1718914625.0, 1718914686.0, 1718914747.0, 1718914808.0, 1718914869.0, 1718
[2024-06-21 01:42:44] 2024-06-21 05:42:20,216 | INFO     | sum of square deviations: 54747656050.69897
[2024-06-21 01:42:44] 2024-06-21 05:42:20,221 | INFO     | sum of deviations: 274016713051.0125
[2024-06-21 01:42:44] 2024-06-21 05:42:20,221 | INFO     | mean x: 1718931400.0231729
[2024-06-21 01:42:44] 2024-06-21 05:42:20,221 | INFO     | mean y: 2512384.7682709447
[2024-06-21 01:42:44] 2024-06-21 05:42:20,222 | INFO     | -- intersect: -8600886667.756308
[2024-06-21 01:42:44] 2024-06-21 05:42:20,222 | INFO     | intersect: -8600886667.756308
[2024-06-21 01:42:44] 2024-06-21 05:42:20,222 | INFO     | chi2: 3.965383139342334
[2024-06-21 01:42:44] 2024-06-21 05:42:20,222 | INFO     | current chi2=3.965383139342334 (change=44.41579355345468 %)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,223 | INFO     | model: linear, x: [1718914625.0, 1718914686.0, 1718914747.0, 1718914808.0, 1718914869.0, 1718914930.0, 1718914991.0, 1718915052.0, 1718915113.0, 1718915174.0, 1718
[2024-06-21 01:42:44] 2024-06-21 05:42:20,223 | INFO     | sum of square deviations: 53296815580.69637
[2024-06-21 01:42:44] 2024-06-21 05:42:20,228 | INFO     | sum of deviations: 145677721428.03793
[2024-06-21 01:42:44] 2024-06-21 05:42:20,228 | INFO     | mean x: 1718931552.5233812
[2024-06-21 01:42:44] 2024-06-21 05:42:20,228 | INFO     | mean y: 2525874.9586330936
[2024-06-21 01:42:44] 2024-06-21 05:42:20,228 | INFO     | -- intersect: -4695879257.393442
[2024-06-21 01:42:44] 2024-06-21 05:42:20,228 | INFO     | intersect: -4695879257.393442
[2024-06-21 01:42:44] 2024-06-21 05:42:20,229 | INFO     | chi2: 2.168973024433205
[2024-06-21 01:42:44] 2024-06-21 05:42:20,229 | INFO     | current chi2=2.168973024433205 (change=45.30230880053288 %)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,229 | INFO     | model: linear, x: [1718914930.0, 1718914991.0, 1718915052.0, 1718915113.0, 1718915174.0, 1718915235.0, 1718915296.0, 1718915357.0, 1718915418.0, 1718915479.0, 1718
[2024-06-21 01:42:44] 2024-06-21 05:42:20,229 | INFO     | sum of square deviations: 51871836060.6932
[2024-06-21 01:42:44] 2024-06-21 05:42:20,234 | INFO     | sum of deviations: 42701105554.25956
[2024-06-21 01:42:44] 2024-06-21 05:42:20,234 | INFO     | mean x: 1718931705.0235934
[2024-06-21 01:42:44] 2024-06-21 05:42:20,234 | INFO     | mean y: 2536879.980036298
[2024-06-21 01:42:44] 2024-06-21 05:42:20,234 | INFO     | -- intersect: -1412494662.2019875
[2024-06-21 01:42:44] 2024-06-21 05:42:20,234 | INFO     | intersect: -1412494662.2019875
[2024-06-21 01:42:44] 2024-06-21 05:42:20,235 | INFO     | chi2: 0.9151628039025095
[2024-06-21 01:42:44] 2024-06-21 05:42:20,235 | INFO     | current chi2=0.9151628039025095 (change=57.806630437847 %)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,235 | INFO     | model: linear, x: [1718915235.0, 1718915296.0, 1718915357.0, 1718915418.0, 1718915479.0, 1718915540.0, 1718915601.0, 1718915662.0, 1718915723.0, 1718915784.0, 1718
[2024-06-21 01:42:44] 2024-06-21 05:42:20,235 | INFO     | sum of square deviations: 50472484928.190414
[2024-06-21 01:42:44] 2024-06-21 05:42:20,240 | INFO     | sum of deviations: 14082877090.28572
[2024-06-21 01:42:44] 2024-06-21 05:42:20,240 | INFO     | mean x: 1718931857.5238094
[2024-06-21 01:42:44] 2024-06-21 05:42:20,240 | INFO     | mean y: 2539994.708791209
[2024-06-21 01:42:44] 2024-06-21 05:42:20,240 | INFO     | -- intersect: -477077882.44795066
[2024-06-21 01:42:44] 2024-06-21 05:42:20,240 | INFO     | intersect: -477077882.44795066
[2024-06-21 01:42:44] 2024-06-21 05:42:20,241 | INFO     | chi2: 0.822887898313811
[2024-06-21 01:42:44] 2024-06-21 05:42:20,241 | INFO     | current chi2=0.822887898313811 (change=10.082895108412679 %)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,241 | INFO     | left removable region: 40
[2024-06-21 01:42:44] 2024-06-21 05:42:20,241 | INFO     | model: linear, x: [1718916455.0, 1718916516.0, 1718916577.0, 1718916638.0, 1718916699.0, 1718916760.0, 1718916821.0, 1718916882.0, 1718916943.0, 1718917004.0, 1718
[2024-06-21 01:42:44] 2024-06-21 05:42:20,241 | INFO     | sum of square deviations: 43600000783.67483
[2024-06-21 01:42:44] 2024-06-21 05:42:20,246 | INFO     | sum of deviations: 38415723428.075
[2024-06-21 01:42:44] 2024-06-21 05:42:20,246 | INFO     | mean x: 1718932284.525
[2024-06-21 01:42:44] 2024-06-21 05:42:20,246 | INFO     | mean y: 2545492.725
[2024-06-21 01:42:44] 2024-06-21 05:42:20,247 | INFO     | -- intersect: -1511996389.08677
[2024-06-21 01:42:44] 2024-06-21 05:42:20,247 | INFO     | intersect: -1511996389.08677
[2024-06-21 01:42:44] 2024-06-21 05:42:20,247 | INFO     | chi2: 0.0014427998114800188
[2024-06-21 01:42:44] 2024-06-21 05:42:20,247 | INFO     | -- intersect: -1511996389.08677
[2024-06-21 01:42:44] 2024-06-21 05:42:20,247 | INFO     | current memory leak: 0.88 B/s (using 520 data points, chi2=0.00)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,248 | INFO     | ..............................
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . Timing measurements:
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . get job = 0 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . initial setup = 3 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . payload setup = 57 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . stage-in = 0 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . payload execution = 34527 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . stage-out = 5 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | . log creation = 1 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,249 | INFO     | ..............................
[2024-06-21 01:42:44] 2024-06-21 05:42:20,329 | INFO     | 
[2024-06-21 01:42:44] 2024-06-21 05:42:20,337 | INFO     | job summary report
[2024-06-21 01:42:44] 2024-06-21 05:42:20,337 | INFO     | --------------------------------------------------
[2024-06-21 01:42:44] 2024-06-21 05:42:20,337 | INFO     | PanDA job id: 6238909372
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | task id: 38921013
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | errors: (none)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | pilot state: finished 
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | transexitcode: 0
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | exeerrorcode: 0
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | exeerrordiag: 
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | exitcode: 0
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | exitmsg: OK
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | cpuconsumptiontime: 140751 s
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | nevents: 400
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | neventsw: 0
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | pid: 81591
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | pgrp: 81591
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | corecount: 8
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | event service: False
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | sizes: {0: 2386919, 1: 2387118, 11: 2387118, 22: 2387146, 33: 2387174, 43: 2387202, 44: 2387564, 54: 2387592, 34587: 2426842, 34588: 2426841, 34593: 2435857, 34596
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | --------------------------------------------------
[2024-06-21 01:42:44] 2024-06-21 05:42:20,338 | INFO     | 
[2024-06-21 01:42:44] 2024-06-21 05:42:20,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-06-21 01:42:44] 2024-06-21 05:42:20,372 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | job 6238909372 has completed (purged errors)
[2024-06-21 01:42:44] 2024-06-21 05:42:20,374 | INFO     | overall cleanup function is called
[2024-06-21 01:42:44] 2024-06-21 05:42:21,381 | INFO     | --- collectZombieJob: --- 10, [81591]
[2024-06-21 01:42:44] 2024-06-21 05:42:21,385 | INFO     | zombie collector waiting for pid 81591
[2024-06-21 01:42:44] 2024-06-21 05:42:21,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 01:42:44] 2024-06-21 05:42:22,391 | INFO     | collected zombie processes
[2024-06-21 01:42:44] 2024-06-21 05:42:22,392 | INFO     | will now attempt to kill all subprocesses of pid=81591
[2024-06-21 01:42:44] 2024-06-21 05:42:22,874 | INFO     | process IDs to be killed: [81591] (in reverse order)
[2024-06-21 01:42:44] 2024-06-21 05:42:23,356 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 01:42:44] 2024-06-21 05:42:23,356 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 01:42:44] 2024-06-21 05:42:23,379 | INFO     | did not find any defunct processes belonging to 81591
[2024-06-21 01:42:44] 2024-06-21 05:42:23,402 | INFO     | did not find any defunct processes belonging to 81591
[2024-06-21 01:42:44] 2024-06-21 05:42:23,402 | INFO     | ready for new job
[2024-06-21 01:42:44] 2024-06-21 05:42:23,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 01:42:44] 2024-06-21 05:42:23,411 | INFO     | *************************************
[2024-06-21 01:42:44] 2024-06-21 05:42:23,411 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 01:42:44] 2024-06-21 05:42:23,411 | INFO     | *************************************
[2024-06-21 01:42:44] 2024-06-21 05:42:23,411 | INFO     | 
[2024-06-21 01:42:44] 2024-06-21 05:42:23,420 | INFO     | architecture information:
[2024-06-21 01:42:44] 2024-06-21 05:42:23,431 | INFO     | executing command: cat /etc/os-release
[2024-06-21 01:42:44] 2024-06-21 05:42:23,578 | INFO     | cat /etc/os-release:
[2024-06-21 01:42:44] NAME="CentOS Linux"
[2024-06-21 01:42:44] VERSION="7 (Core)"
[2024-06-21 01:42:44] ID="centos"
[2024-06-21 01:42:44] ID_LIKE="rhel fedora"
[2024-06-21 01:42:44] VERSION_ID="7"
[2024-06-21 01:42:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 01:42:44] ANSI_COLOR="0;31"
[2024-06-21 01:42:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 01:42:44] HOME_URL="https://www.centos.org/"
[2024-06-21 01:42:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 01:42:44] 
[2024-06-21 01:42:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 01:42:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 01:42:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 01:42:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 01:42:44] 
[2024-06-21 01:42:44] 2024-06-21 05:42:23,578 | INFO     | *************************************
[2024-06-21 01:42:44] 2024-06-21 05:42:24,082 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-06-21 01:42:44] 2024-06-21 05:42:24,199 | INFO     | sufficient remaining disk space (99422830592 B)
[2024-06-21 01:42:44] 2024-06-21 05:42:24,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 01:42:44] 2024-06-21 05:42:24,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 01:42:44] 2024-06-21 05:42:24,367 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 01:42:44] 2024-06-21 05:42:24,368 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 01:42:44] 2024-06-21 05:42:24,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:42:44] 2024-06-21 05:42:24,368 | INFO     | will abort loop
[2024-06-21 01:42:44] 2024-06-21 05:42:24,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 01:42:44] 2024-06-21 05:42:24,433 | INFO     | all payload control threads have been joined
[2024-06-21 01:42:44] 2024-06-21 05:42:24,477 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 01:42:44] 2024-06-21 05:42:24,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 01:42:44] 2024-06-21 05:42:24,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 01:42:44] 2024-06-21 05:42:25,035 | INFO     | all data control threads have been joined
[2024-06-21 01:42:44] 2024-06-21 05:42:25,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 01:42:44] 2024-06-21 05:42:25,204 | INFO     | [job] retrieve thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 01:42:44] 2024-06-21 05:42:25,365 | INFO     | [job] validate thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,370 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,374 | INFO     | [job] job monitor thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,380 | INFO     | [payload] validate_post thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,397 | INFO     | [data] copytool_in thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,439 | INFO     | [payload] control thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:25,526 | INFO     | all job control threads have been joined
[2024-06-21 01:42:44] 2024-06-21 05:42:26,041 | INFO     | [data] control thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:26,070 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:26,098 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:26,350 | INFO     | [job] queue monitor thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:26,532 | INFO     | [job] control thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:26,670 | INFO     | [payload] failed_post thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:27,095 | INFO     | [data] copytool_out thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:28,439 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:34,848 | INFO     | job.realtimelogging is not enabled
[2024-06-21 01:42:44] 2024-06-21 05:42:35,854 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 01:42:44] 2024-06-21 05:42:37,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037309093696)>', '<ExcThread(monitor, started 140037084653312)>']
[2024-06-21 01:42:44] 2024-06-21 05:42:38,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 01:42:44] 2024-06-21 05:42:38,571 | INFO     | [monitor] control thread has ended
[2024-06-21 01:42:44] 2024-06-21 05:42:42,909 | INFO     | all workflow threads have been joined
[2024-06-21 01:42:44] 2024-06-21 05:42:42,909 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 01:42:44] 2024-06-21 05:42:42,913 | INFO     | traces error code: 0
[2024-06-21 01:42:44] 2024-06-21 05:42:42,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 01:42:44] 2024-06-21 05:42:43,205 [wrapper] ==== pilot stdout END ====
[2024-06-21 01:42:44] 2024-06-21 05:42:43,208 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 01:42:44] 2024-06-21 05:42:43,212 [wrapper] pilotpid: 62405
[2024-06-21 01:42:44] 2024-06-21 05:42:43,216 [wrapper] Pilot exit status: 0
[2024-06-21 01:42:44] 2024-06-21 05:42:43,366 [wrapper] pandaids: 6238909372
[2024-06-21 01:42:44] 2024-06-21 05:42:43,550 [wrapper] cleanup supervisor_pilot 24445 62406
[2024-06-21 01:42:44] 2024-06-21 05:42:43,592 [wrapper] Test setup, not cleaning
[2024-06-21 01:42:44] 2024-06-21 05:42:43,635 [wrapper] ==== wrapper stdout END ====
[2024-06-21 01:42:44] 2024-06-21 05:42:43,681 [wrapper] ==== wrapper stderr END ====
[2024-06-21 01:42:44] 2024-06-21 05:42:43,767 [wrapper] apfmon messages muted
[2024-06-21 01:42:44]  *** Error codes and diagnostics ***
[2024-06-21 01:42:44]     "exeErrorCode": 0,
[2024-06-21 01:42:44]     "exeErrorDiag": "",
[2024-06-21 01:42:44]     "pilotErrorCode": 0,
[2024-06-21 01:42:44]     "pilotErrorDiag": "",
[2024-06-21 01:42:44]  *** Listing of results directory ***
[2024-06-21 01:42:44] total 881712
[2024-06-21 01:42:44] -rwx------ 1 boincer umatlas     32308 Jun 20 11:20 runpilot2-wrapper.sh
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas    469766 Jun 20 11:25 pilot3.tar.gz
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas      5654 Jun 20 11:26 queuedata.json
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas       100 Jun 20 16:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 01:42:44] -rwxr-xr-x 1 boincer umatlas      7986 Jun 20 16:01 run_atlas
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas       105 Jun 20 16:01 job.xml
[2024-06-21 01:42:44] -rw-r--r-- 2 boincer umatlas 542835798 Jun 20 16:01 EVNT.38776210._000590.pool.root.1
[2024-06-21 01:42:44] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 16:01 start_atlas.sh
[2024-06-21 01:42:44] drwxrwx--x 2 boincer umatlas      4096 Jun 20 16:01 shared
[2024-06-21 01:42:44] -rw-r--r-- 2 boincer umatlas    482530 Jun 20 16:01 input.tar.gz
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas         0 Jun 20 16:01 boinc_lockfile
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas      2646 Jun 20 16:02 pandaJob.out
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas       424 Jun 20 16:02 setup.sh.local
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas   1024128 Jun 20 16:03 agis_schedconf.cvmfs.json
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas   1321251 Jun 20 16:03 cric_ddmendpoints.json
[2024-06-21 01:42:44] drwx------ 4 boincer umatlas      4096 Jun 20 16:03 pilot3
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas      6303 Jun 21 01:37 init_data.xml
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas 347072283 Jun 21 01:40 HITS.38921013._050271.pool.root.1
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas       533 Jun 21 01:40 boinc_task_state.xml
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas      1097 Jun 21 01:41 memory_monitor_summary.json
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas         0 Jun 21 01:41 agis_ddmendpoints.agis.ALL.json
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas    662584 Jun 21 01:41 log.38921013._050271.job.log.tgz.1
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas        95 Jun 21 01:41 pilot_heartbeat.json
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas      7781 Jun 21 01:42 heartbeat.json
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas      8192 Jun 21 01:42 boinc_mmap_file
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas        29 Jun 21 01:42 wrapper_checkpoint.txt
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas      4469 Jun 21 01:42 pilotlog.txt
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas   4053974 Jun 21 01:42 log.38921013._050271.job.log.1
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas       357 Jun 21 01:42 output.list
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas       620 Jun 21 01:42 runtime_log
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas   4730880 Jun 21 01:42 result.tar.gz
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas     10995 Jun 21 01:42 runtime_log.err
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas       653 Jun 21 01:42 DzeLDmtlYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmouqKDmeWEpPn.diag
[2024-06-21 01:42:44] -rw-r--r-- 1 boincer umatlas     21642 Jun 21 01:42 stderr.txt
[2024-06-21 01:42:44] HITS file was successfully produced:
[2024-06-21 01:42:44] -rw------- 1 boincer umatlas 347072283 Jun 21 01:40 shared/HITS.pool.root.1
[2024-06-21 01:42:44]  *** Contents of shared directory: ***
[2024-06-21 01:42:45] total 874176
[2024-06-21 01:42:45] -rw-r--r-- 2 boincer umatlas 542835798 Jun 20 16:01 ATLAS.root_0
[2024-06-21 01:42:45] -rw-r--r-- 2 boincer umatlas     17537 Jun 20 16:01 start_atlas.sh
[2024-06-21 01:42:45] -rw-r--r-- 2 boincer umatlas    482530 Jun 20 16:01 input.tar.gz
[2024-06-21 01:42:45] -rw------- 1 boincer umatlas 347072283 Jun 21 01:40 HITS.pool.root.1
[2024-06-21 01:42:45] -rw------- 1 boincer umatlas   4730880 Jun 21 01:42 result.tar.gz
01:42:46 (49629): run_atlas exited; CPU time 138334.616713
01:42:46 (49629): called boinc_finish(0)

</stderr_txt>
]]>

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