Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:14:24 (541575): wrapper (7.7.26015): starting
08:14:24 (541575): wrapper: running run_atlas (--nthreads 4)
[2024-06-23 08:14:24] Arguments: --nthreads 4
[2024-06-23 08:14:24] Threads: 4
[2024-06-23 08:14:24] Checking for CVMFS
[2024-06-23 08:14:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-23 08:14:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-23 08:14:24] Running cvmfs_config stat atlas.cern.ch
[2024-06-23 08:14:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-23 08:14:25] 2.11.2.0 7702 18556 59408 134192 0 55 5902978 6144000 915 130560 0 23606026 99.985 3162468 6025 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-23 08:14:25] CVMFS is ok
[2024-06-23 08:14:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-23 08:14:25] Checking for apptainer binary...
[2024-06-23 08:14:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-23 08:14:25] Running /usr/bin/apptainer --version
[2024-06-23 08:14:25] apptainer version 1.3.0
[2024-06-23 08:14:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-23 08:14:25] Opti7020b
[2024-06-23 08:14:25] apptainer works
[2024-06-23 08:14:25] Set ATHENA_PROC_NUMBER=4
[2024-06-23 08:14:25] Set ATHENA_CORE_NUMBER=4
[2024-06-23 08:14:25] Starting ATLAS job with PandaID=6238909384
[2024-06-23 08:14:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-23 17:04:04]  *** The last 200 lines of the pilot log: ***
[2024-06-23 17:04:04] 2024-06-23 15:03:43,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-23 17:04:04] 2024-06-23 15:03:44,667 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-23 17:04:04] 2024-06-23 15:03:44,667 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6238909384/memory_monitor_summary.json (trf name=prmon)
[2024-06-23 17:04:04] 2024-06-23 15:03:44,668 | INFO     | extracted standard info from prmon json
[2024-06-23 17:04:04] 2024-06-23 15:03:44,668 | INFO     | extracted standard memory fields from prmon json
[2024-06-23 17:04:04] 2024-06-23 15:03:44,668 | WARNING  | GPU info not found in prmon json
[2024-06-23 17:04:04] 2024-06-23 15:03:44,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-23 17:04:04] 2024-06-23 15:03:44,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-23 17:04:04] 2024-06-23 15:03:44,675 | INFO     | fitting pss+swap vs Time
[2024-06-23 17:04:04] 2024-06-23 15:03:44,676 | INFO     | model: linear, x: [1719123291.0, 1719123352.0, 1719123413.0, 1719123474.0, 1719123535.0, 1719123596.0, 1719123657.0, 1719123718.0, 1719123779.0, 1719123840.0, 1719
[2024-06-23 17:04:04] 2024-06-23 15:03:44,676 | INFO     | sum of square deviations: 43600036090.0
[2024-06-23 17:04:04] 2024-06-23 15:03:44,681 | INFO     | sum of deviations: -158737194734.0
[2024-06-23 17:04:04] 2024-06-23 15:03:44,681 | INFO     | mean x: 1719139120.5
[2024-06-23 17:04:04] 2024-06-23 15:03:44,681 | INFO     | mean y: 2445716.9730769233
[2024-06-23 17:04:04] 2024-06-23 15:03:44,681 | INFO     | -- intersect: 6261415796.317477
[2024-06-23 17:04:04] 2024-06-23 15:03:44,681 | INFO     | intersect: 6261415796.317477
[2024-06-23 17:04:04] 2024-06-23 15:03:44,682 | INFO     | chi2: 2.4111965006158016
[2024-06-23 17:04:04] 2024-06-23 15:03:44,682 | INFO     | model: linear, x: [1719123291.0, 1719123352.0, 1719123413.0, 1719123474.0, 1719123535.0, 1719123596.0, 1719123657.0, 1719123718.0, 1719123779.0, 1719123840.0, 1719
[2024-06-23 17:04:04] 2024-06-23 15:03:44,682 | INFO     | sum of square deviations: 42354394130.0
[2024-06-23 17:04:04] 2024-06-23 15:03:44,687 | INFO     | sum of deviations: -156982684552.0001
[2024-06-23 17:04:04] 2024-06-23 15:03:44,687 | INFO     | mean x: 1719138968.0
[2024-06-23 17:04:04] 2024-06-23 15:03:44,687 | INFO     | mean y: 2445931.7805825244
[2024-06-23 17:04:04] 2024-06-23 15:03:44,687 | INFO     | -- intersect: 6374277139.807238
[2024-06-23 17:04:04] 2024-06-23 15:03:44,688 | INFO     | intersect: 6374277139.807238
[2024-06-23 17:04:04] 2024-06-23 15:03:44,688 | INFO     | chi2: 2.408949102304885
[2024-06-23 17:04:04] 2024-06-23 15:03:44,688 | INFO     | current chi2=2.408949102304885 (change=0.09320676727686171 %)
[2024-06-23 17:04:04] 2024-06-23 15:03:44,688 | INFO     | right removable region: 514
[2024-06-23 17:04:04] 2024-06-23 15:03:44,689 | INFO     | model: linear, x: [1719123596.0, 1719123657.0, 1719123718.0, 1719123779.0, 1719123840.0, 1719123901.0, 1719123962.0, 1719124023.0, 1719124084.0, 1719124145.0, 1719
[2024-06-23 17:04:04] 2024-06-23 15:03:44,689 | INFO     | sum of square deviations: 42354394130.0
[2024-06-23 17:04:04] 2024-06-23 15:03:44,693 | INFO     | sum of deviations: -254766657136.00006
[2024-06-23 17:04:04] 2024-06-23 15:03:44,694 | INFO     | mean x: 1719139273.0
[2024-06-23 17:04:04] 2024-06-23 15:03:44,694 | INFO     | mean y: 2457440.2466019415
[2024-06-23 17:04:04] 2024-06-23 15:03:44,694 | INFO     | -- intersect: 10343282158.199505
[2024-06-23 17:04:04] 2024-06-23 15:03:44,694 | INFO     | intersect: 10343282158.199505
[2024-06-23 17:04:04] 2024-06-23 15:03:44,694 | INFO     | chi2: 0.6820928876481437
[2024-06-23 17:04:04] 2024-06-23 15:03:44,694 | INFO     | current chi2=0.6820928876481437 (change=71.71143507076498 %)
[2024-06-23 17:04:04] 2024-06-23 15:03:44,695 | INFO     | model: linear, x: [1719123901.0, 1719123962.0, 1719124023.0, 1719124084.0, 1719124145.0, 1719124206.0, 1719124267.0, 1719124328.0, 1719124389.0, 1719124450.0, 1719
[2024-06-23 17:04:04] 2024-06-23 15:03:44,695 | INFO     | sum of square deviations: 41132706107.5
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | sum of deviations: -244928515159.99997
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | mean x: 1719139425.5
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | mean y: 2456207.654901961
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | -- intersect: 10239231433.196276
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | intersect: 10239231433.196276
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | chi2: 0.6750214584316417
[2024-06-23 17:04:04] 2024-06-23 15:03:44,700 | INFO     | current chi2=0.6750214584316417 (change=1.0367252531959736 %)
[2024-06-23 17:04:04] 2024-06-23 15:03:44,701 | INFO     | left removable region: 20
[2024-06-23 17:04:04] 2024-06-23 15:03:44,701 | INFO     | model: linear, x: [1719124511.0, 1719124572.0, 1719124633.0, 1719124694.0, 1719124755.0, 1719124816.0, 1719124877.0, 1719124938.0, 1719124999.0, 1719125060.0, 1719
[2024-06-23 17:04:04] 2024-06-23 15:03:44,701 | INFO     | sum of square deviations: 37381566007.5
[2024-06-23 17:04:04] 2024-06-23 15:03:44,705 | INFO     | sum of deviations: -197217400235.00003
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | mean x: 1719139547.5
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | mean y: 2450711.4412955465
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | -- intersect: 9072274916.534807
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | intersect: 9072274916.534807
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | chi2: 0.6089666953991149
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | -- intersect: 9072274916.534807
[2024-06-23 17:04:04] 2024-06-23 15:03:44,706 | INFO     | current memory leak: -5.28 B/s (using 494 data points, chi2=0.61)
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | ..............................
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . Timing measurements:
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . get job = 0 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . initial setup = 1 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . payload setup = 3 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . stage-in = 0 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . payload execution = 31720 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . stage-out = 0 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,707 | INFO     | . log creation = 0 s
[2024-06-23 17:04:04] 2024-06-23 15:03:44,708 | INFO     | ..............................
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | 
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | job summary report
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | --------------------------------------------------
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | PanDA job id: 6238909384
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | task id: 38921007
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | errors: (none)
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | pilot state: finished 
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | transexitcode: 0
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | exeerrorcode: 0
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | exeerrordiag: 
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | exitcode: 0
[2024-06-23 17:04:04] 2024-06-23 15:03:45,090 | INFO     | exitmsg: OK
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | cpuconsumptiontime: 123846 s
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | nevents: 400
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | neventsw: 0
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | pid: 552204
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | pgrp: 552204
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | corecount: 4
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | event service: False
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | sizes: {0: 2387108, 3: 2387314, 11: 2387342, 31727: 2426354, 31729: 2435314, 31731: 2435370, 31740: 2435668}
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | --------------------------------------------------
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | 
[2024-06-23 17:04:04] 2024-06-23 15:03:45,091 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | job 6238909384 has completed (purged errors)
[2024-06-23 17:04:04] 2024-06-23 15:03:45,105 | INFO     | overall cleanup function is called
[2024-06-23 17:04:04] 2024-06-23 15:03:46,112 | INFO     | --- collectZombieJob: --- 10, [552204]
[2024-06-23 17:04:04] 2024-06-23 15:03:46,112 | INFO     | zombie collector waiting for pid 552204
[2024-06-23 17:04:04] 2024-06-23 15:03:46,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-23 17:04:04] 2024-06-23 15:03:47,117 | INFO     | collected zombie processes
[2024-06-23 17:04:04] 2024-06-23 15:03:47,117 | INFO     | will now attempt to kill all subprocesses of pid=552204
[2024-06-23 17:04:04] 2024-06-23 15:03:47,166 | INFO     | process IDs to be killed: [552204] (in reverse order)
[2024-06-23 17:04:04] 2024-06-23 15:03:47,196 | WARNING  | found no corresponding commands to process id(s)
[2024-06-23 17:04:04] 2024-06-23 15:03:47,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-23 17:04:04] 2024-06-23 15:03:47,198 | INFO     | did not find any defunct processes belonging to 552204
[2024-06-23 17:04:04] 2024-06-23 15:03:47,200 | INFO     | did not find any defunct processes belonging to 552204
[2024-06-23 17:04:04] 2024-06-23 15:03:47,200 | INFO     | ready for new job
[2024-06-23 17:04:04] 2024-06-23 15:03:47,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-23 17:04:04] 2024-06-23 15:03:47,202 | INFO     | *************************************
[2024-06-23 17:04:04] 2024-06-23 15:03:47,202 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-23 17:04:04] 2024-06-23 15:03:47,202 | INFO     | *************************************
[2024-06-23 17:04:04] 2024-06-23 15:03:47,202 | INFO     | 
[2024-06-23 17:04:04] 2024-06-23 15:03:47,203 | INFO     | architecture information:
[2024-06-23 17:04:04] 2024-06-23 15:03:47,203 | INFO     | executing command: cat /etc/os-release
[2024-06-23 17:04:04] 2024-06-23 15:03:47,213 | INFO     | cat /etc/os-release:
[2024-06-23 17:04:04] NAME="CentOS Linux"
[2024-06-23 17:04:04] VERSION="7 (Core)"
[2024-06-23 17:04:04] ID="centos"
[2024-06-23 17:04:04] ID_LIKE="rhel fedora"
[2024-06-23 17:04:04] VERSION_ID="7"
[2024-06-23 17:04:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-23 17:04:04] ANSI_COLOR="0;31"
[2024-06-23 17:04:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-23 17:04:04] HOME_URL="https://www.centos.org/"
[2024-06-23 17:04:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-23 17:04:04] 
[2024-06-23 17:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-23 17:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-23 17:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-23 17:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-23 17:04:04] 
[2024-06-23 17:04:04] 2024-06-23 15:03:47,213 | INFO     | *************************************
[2024-06-23 17:04:04] 2024-06-23 15:03:47,716 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-23 17:04:04] 2024-06-23 15:03:47,726 | INFO     | sufficient remaining disk space (169334538240 B)
[2024-06-23 17:04:04] 2024-06-23 15:03:47,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-23 17:04:04] 2024-06-23 15:03:47,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-23 17:04:04] 2024-06-23 15:03:47,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-23 17:04:04] 2024-06-23 15:03:47,727 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-23 17:04:04] 2024-06-23 15:03:47,727 | INFO     | found 0 job(s) in 20 queues
[2024-06-23 17:04:04] 2024-06-23 15:03:47,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-23 17:04:04] 2024-06-23 15:03:47,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-23 17:04:04] 2024-06-23 15:03:48,092 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-23 17:04:04] 2024-06-23 15:03:48,092 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-23 17:04:04] 2024-06-23 15:03:48,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-23 17:04:04] 2024-06-23 15:03:48,092 | INFO     | will abort loop
[2024-06-23 17:04:04] 2024-06-23 15:03:48,106 | INFO     | all payload control threads have been joined
[2024-06-23 17:04:04] 2024-06-23 15:03:48,255 | INFO     | all job control threads have been joined
[2024-06-23 17:04:04] 2024-06-23 15:03:48,354 | INFO     | all data control threads have been joined
[2024-06-23 17:04:04] 2024-06-23 15:03:48,728 | INFO     | [job] retrieve thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,041 | INFO     | [job] validate thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,046 | INFO     | [data] copytool_in thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,068 | INFO     | [payload] execute_payloads thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,098 | INFO     | [job] job monitor thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,110 | INFO     | [payload] control thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,158 | INFO     | [payload] validate_pre thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,260 | INFO     | [job] control thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,303 | INFO     | [job] create_data_payload thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,359 | INFO     | [data] control thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,373 | INFO     | [payload] failed_post thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,730 | INFO     | [data] copytool_out thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:49,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-23 17:04:04] 2024-06-23 15:03:50,236 | INFO     | [payload] validate_post thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:50,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-23 17:04:04] 2024-06-23 15:03:50,792 | INFO     | [job] queue monitor thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:54,525 | INFO     | [data] queue_monitor thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:58,180 | INFO     | job.realtimelogging is not enabled
[2024-06-23 17:04:04] 2024-06-23 15:03:59,183 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-23 17:04:04] 2024-06-23 15:03:59,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621794989888)>', '<ExcThread(monitor, started 140621163513600)>']
[2024-06-23 17:04:04] 2024-06-23 15:03:59,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-23 17:04:04] 2024-06-23 15:03:59,771 | INFO     | [monitor] control thread has ended
[2024-06-23 17:04:04] 2024-06-23 15:04:04,574 | INFO     | all workflow threads have been joined
[2024-06-23 17:04:04] 2024-06-23 15:04:04,574 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-23 17:04:04] 2024-06-23 15:04:04,574 | INFO     | traces error code: 0
[2024-06-23 17:04:04] 2024-06-23 15:04:04,574 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-23 17:04:04] 2024-06-23 15:04:04,660 [wrapper] ==== pilot stdout END ====
[2024-06-23 17:04:04] 2024-06-23 15:04:04,661 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-23 17:04:04] 2024-06-23 15:04:04,663 [wrapper] pilotpid: 545761
[2024-06-23 17:04:04] 2024-06-23 15:04:04,665 [wrapper] Pilot exit status: 0
[2024-06-23 17:04:04] 2024-06-23 15:04:04,671 [wrapper] pandaids: 6238909384
[2024-06-23 17:04:04] 2024-06-23 15:04:04,689 [wrapper] cleanup supervisor_pilot  667729 545762
[2024-06-23 17:04:04] 2024-06-23 15:04:04,691 [wrapper] Test setup, not cleaning
[2024-06-23 17:04:04] 2024-06-23 15:04:04,693 [wrapper] ==== wrapper stdout END ====
[2024-06-23 17:04:04] 2024-06-23 15:04:04,694 [wrapper] ==== wrapper stderr END ====
[2024-06-23 17:04:04] 2024-06-23 15:04:04,698 [wrapper] apfmon messages muted
[2024-06-23 17:04:04]  *** Error codes and diagnostics ***
[2024-06-23 17:04:04]     "exeErrorCode": 0,
[2024-06-23 17:04:04]     "exeErrorDiag": "",
[2024-06-23 17:04:04]     "pilotErrorCode": 0,
[2024-06-23 17:04:04]     "pilotErrorDiag": "",
[2024-06-23 17:04:04]  *** Listing of results directory ***
[2024-06-23 17:04:04] insgesamt 928908
[2024-06-23 17:04:04] -rwx------ 1 boinc boinc     32308 20. Jun 17:20 runpilot2-wrapper.sh
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc    469766 20. Jun 17:25 pilot3.tar.gz
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc      5654 20. Jun 17:26 queuedata.json
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc       100 23. Jun 08:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-23 17:04:04] -rwxr-xr-x 1 boinc boinc      7986 23. Jun 08:14 run_atlas
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc       105 23. Jun 08:14 job.xml
[2024-06-23 17:04:04] -rw-r--r-- 2 boinc boinc 584799541 23. Jun 08:14 EVNT.38776201._000839.pool.root.1
[2024-06-23 17:04:04] drwxrwx--x 2 boinc boinc      4096 23. Jun 08:14 shared
[2024-06-23 17:04:04] -rw-r--r-- 2 boinc boinc    482526 23. Jun 08:14 input.tar.gz
[2024-06-23 17:04:04] -rw-r--r-- 2 boinc boinc     17537 23. Jun 08:14 start_atlas.sh
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc         0 23. Jun 08:14 boinc_lockfile
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc      2630 23. Jun 08:14 pandaJob.out
[2024-06-23 17:04:04] -rw------- 1 boinc boinc       461 23. Jun 08:14 setup.sh.local
[2024-06-23 17:04:04] -rw------- 1 boinc boinc   1025270 23. Jun 08:14 agis_schedconf.cvmfs.json
[2024-06-23 17:04:04] -rw------- 1 boinc boinc   1321363 23. Jun 08:14 cric_ddmendpoints.json
[2024-06-23 17:04:04] drwx------ 4 boinc boinc      4096 23. Jun 08:14 pilot3
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc      6577 23. Jun 08:25 init_data.xml
[2024-06-23 17:04:04] -rw------- 1 boinc boinc 355220343 23. Jun 17:02 HITS.38921007._051318.pool.root.1
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc       532 23. Jun 17:03 boinc_task_state.xml
[2024-06-23 17:04:04] -rw------- 1 boinc boinc        95 23. Jun 17:03 pilot_heartbeat.json
[2024-06-23 17:04:04] -rw------- 1 boinc boinc      1026 23. Jun 17:03 memory_monitor_summary.json
[2024-06-23 17:04:04] -rw------- 1 boinc boinc         0 23. Jun 17:03 agis_ddmendpoints.agis.ALL.json
[2024-06-23 17:04:04] -rw------- 1 boinc boinc    507003 23. Jun 17:03 log.38921007._051318.job.log.tgz.1
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc      8192 23. Jun 17:03 boinc_mmap_file
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc        29 23. Jun 17:03 wrapper_checkpoint.txt
[2024-06-23 17:04:04] -rw------- 1 boinc boinc      7685 23. Jun 17:03 heartbeat.json
[2024-06-23 17:04:04] -rw------- 1 boinc boinc      4593 23. Jun 17:04 pilotlog.txt
[2024-06-23 17:04:04] -rw------- 1 boinc boinc   3316462 23. Jun 17:04 log.38921007._051318.job.log.1
[2024-06-23 17:04:04] -rw------- 1 boinc boinc       357 23. Jun 17:04 output.list
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc       620 23. Jun 17:04 runtime_log
[2024-06-23 17:04:04] -rw------- 1 boinc boinc   3840000 23. Jun 17:04 result.tar.gz
[2024-06-23 17:04:04] -rw------- 1 boinc boinc       640 23. Jun 17:04 wVALDmtlYe5n7Olcko1bjSoqABFKDmABFKDmOtvXDmbuqKDmOU7SZm.diag
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc     11344 23. Jun 17:04 runtime_log.err
[2024-06-23 17:04:04] -rw-r--r-- 1 boinc boinc     21273 23. Jun 17:04 stderr.txt
[2024-06-23 17:04:04] HITS file was successfully produced:
[2024-06-23 17:04:04] -rw------- 1 boinc boinc 355220343 23. Jun 17:02 shared/HITS.pool.root.1
[2024-06-23 17:04:04]  *** Contents of shared directory: ***
[2024-06-23 17:04:04] insgesamt 922244
[2024-06-23 17:04:04] -rw-r--r-- 2 boinc boinc 584799541 23. Jun 08:14 ATLAS.root_0
[2024-06-23 17:04:04] -rw-r--r-- 2 boinc boinc    482526 23. Jun 08:14 input.tar.gz
[2024-06-23 17:04:04] -rw-r--r-- 2 boinc boinc     17537 23. Jun 08:14 start_atlas.sh
[2024-06-23 17:04:04] -rw------- 1 boinc boinc 355220343 23. Jun 17:02 HITS.pool.root.1
[2024-06-23 17:04:04] -rw------- 1 boinc boinc   3840000 23. Jun 17:04 result.tar.gz
17:04:05 (541575): run_atlas exited; CPU time 123804.653995
17:04:05 (541575): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN