Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
04:41:38 (188954): wrapper (7.7.26015): starting
04:41:38 (188954): wrapper: running run_atlas (--nthreads 12)
[2024-06-21 04:41:38] Arguments: --nthreads 12
[2024-06-21 04:41:38] Threads: 12
[2024-06-21 04:41:38] Checking for CVMFS
[2024-06-21 04:41:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 04:41:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 04:41:38] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 04:41:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 04:41:38] 2.9.2.0 140182 233829 93004 134126 1 64 45449291 45568000 7635 130560 0 1564462600 99.799 936944801 16686 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-21 04:41:38] CVMFS is ok
[2024-06-21 04:41:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 04:41:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 04:41:38] Further information can be found at the LHC@home message board.
[2024-06-21 04:41:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 04:41:38] Checking for apptainer binary...
[2024-06-21 04:41:38] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 04:41:38] Running /usr/bin/apptainer --version
[2024-06-21 04:41:38] apptainer version 1.3.2-1.el7
[2024-06-21 04:41:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 04:41:40] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0170.triumf.lcg
[2024-06-21 04:41:40] apptainer works
[2024-06-21 04:41:40] Set ATHENA_PROC_NUMBER=12
[2024-06-21 04:41:40] Set ATHENA_CORE_NUMBER=12
[2024-06-21 04:41:40] Starting ATLAS job with PandaID=6238901397
[2024-06-21 04:41:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 06:14:56]  *** The last 200 lines of the pilot log: ***
[2024-06-21 06:14:56]  direct_access_wan=False
[2024-06-21 06:14:56]  domain=
[2024-06-21 06:14:56]  filesize=365194
[2024-06-21 06:14:56]  filetype=log
[2024-06-21 06:14:56]  guid=fbd0143b-ec1a-4a1f-b867-e559348ed579
[2024-06-21 06:14:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-21 06:14:56]  is_tar=False
[2024-06-21 06:14:56]  lfn=log.40024023._000883.job.log.tgz.1
[2024-06-21 06:14:56]  mtime=0
[2024-06-21 06:14:56]  protocol_id=None
[2024-06-21 06:14:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-21 06:14:56]  replicas=None
[2024-06-21 06:14:56]  scope=mc23_13p6TeV
[2024-06-21 06:14:56]  status=None
[2024-06-21 06:14:56]  status_code=0
[2024-06-21 06:14:56]  storage_token=
[2024-06-21 06:14:56]  surl=/home/boinc/slots/0/PanDA_Pilot-6238901397/log.40024023._000883.job.log.tgz.1
[2024-06-21 06:14:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a6/log.40024023._000883.job.log.tgz.1
[2024-06-21 06:14:56]  workdir=None
[2024-06-21 06:14:56] ]
[2024-06-21 06:14:56] 2024-06-21 13:14:29,323 | INFO     | transferring file log.40024023._000883.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6238901397/log.40024023._000883.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-21 06:14:56] 2024-06-21 13:14:29,323 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6238901397/log.40024023._000883.job.log.tgz.1 /home/boinc/slots/0/log.40024023._000883.job.log.t
[2024-06-21 06:14:56] 2024-06-21 13:14:29,354 | INFO     | adding to output.list: log.40024023._000883.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/a6/log.40024023._000883.job.log.tg
[2024-06-21 06:14:56] 2024-06-21 13:14:29,355 | INFO     | summary of transferred files:
[2024-06-21 06:14:56] 2024-06-21 13:14:29,355 | INFO     |  -- lfn=log.40024023._000883.job.log.tgz.1, status_code=0, status=transferred
[2024-06-21 06:14:56] 2024-06-21 13:14:29,356 | INFO     | stage-out finished correctly
[2024-06-21 06:14:56] 2024-06-21 13:14:30,011 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-21 06:14:56] 2024-06-21 13:14:30,055 | INFO     | job 6238901397 has state=finished
[2024-06-21 06:14:56] 2024-06-21 13:14:30,056 | INFO     | preparing for final server update for job 6238901397 in state='finished'
[2024-06-21 06:14:56] 2024-06-21 13:14:30,056 | INFO     | this job has now completed (state=finished)
[2024-06-21 06:14:56] 2024-06-21 13:14:30,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-21 06:14:56] 2024-06-21 13:14:30,057 | INFO     | job 6238901397 has finished - writing final server update
[2024-06-21 06:14:56] 2024-06-21 13:14:30,057 | INFO     | total number of processed events: 400 (read)
[2024-06-21 06:14:56] 2024-06-21 13:14:30,061 | INFO     | executing command: lscpu
[2024-06-21 06:14:56] 2024-06-21 13:14:30,115 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-21 06:14:56] 2024-06-21 13:14:30,116 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-21 06:14:56] 2024-06-21 13:14:30,173 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-21 06:14:56] 2024-06-21 13:14:30,208 | INFO     | monitor loop #359: job 0:6238901397 is in state 'finished'
[2024-06-21 06:14:56] 2024-06-21 13:14:30,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 06:14:56] 2024-06-21 13:14:32,711 | INFO     | monitor loop #360: job 0:6238901397 is in state 'finished'
[2024-06-21 06:14:56] 2024-06-21 13:14:32,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 06:14:56] 2024-06-21 13:14:34,340 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-21 06:14:56] 2024-06-21 13:14:34,340 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6238901397/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 06:14:56] 2024-06-21 13:14:34,341 | INFO     | extracted standard info from prmon json
[2024-06-21 06:14:56] 2024-06-21 13:14:34,341 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 06:14:56] 2024-06-21 13:14:34,341 | WARNING  | GPU info not found in prmon json
[2024-06-21 06:14:56] 2024-06-21 13:14:34,341 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 06:14:56] 2024-06-21 13:14:34,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 06:14:56] 2024-06-21 13:14:34,342 | INFO     | fitting pss+swap vs Time
[2024-06-21 06:14:56] 2024-06-21 13:14:34,342 | INFO     | model: linear, x: [1718970443.0, 1718970504.0, 1718970565.0, 1718970626.0, 1718970687.0, 1718970748.0, 1718970809.0, 1718970870.0, 1718970931.0, 1718970992.0, 1718
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | sum of square deviations: 183759188.70238054
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | sum of deviations: 24168872939.750015
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | mean x: 1718972974.9404762
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | mean y: 2750321.75
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | -- intersect: -226084661750.40747
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | intersect: -226084661750.40747
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | chi2: 2.612391286900354
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | -- intersect: -226084661750.40747
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | current memory leak: 131.52 B/s (using 84 data points, chi2=2.61)
[2024-06-21 06:14:56] 2024-06-21 13:14:34,343 | INFO     | ..............................
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . Timing measurements:
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . get job = 0 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . initial setup = 2 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . payload setup = 5 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . stage-in = 0 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . payload execution = 5530 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . stage-out = 0 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | . log creation = 0 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,344 | INFO     | ..............................
[2024-06-21 06:14:56] 2024-06-21 13:14:34,391 | INFO     | 
[2024-06-21 06:14:56] 2024-06-21 13:14:34,391 | INFO     | job summary report
[2024-06-21 06:14:56] 2024-06-21 13:14:34,391 | INFO     | --------------------------------------------------
[2024-06-21 06:14:56] 2024-06-21 13:14:34,391 | INFO     | PanDA job id: 6238901397
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | task id: 40024023
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | errors: (none)
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | pilot state: finished 
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | transexitcode: 0
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | exeerrorcode: 0
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | exeerrordiag: 
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | exitcode: 0
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | exitmsg: OK
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | cpuconsumptiontime: 38155 s
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | nevents: 400
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | neventsw: 0
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | pid: 199535
[2024-06-21 06:14:56] 2024-06-21 13:14:34,392 | INFO     | pgrp: 199535
[2024-06-21 06:14:56] 2024-06-21 13:14:34,393 | INFO     | corecount: 12
[2024-06-21 06:14:56] 2024-06-21 13:14:34,393 | INFO     | event service: False
[2024-06-21 06:14:56] 2024-06-21 13:14:34,393 | INFO     | sizes: {0: 2386827, 5: 2387033, 11: 2387089, 5539: 2413550, 5540: 2413549, 5542: 2422743, 5547: 2422857}
[2024-06-21 06:14:56] 2024-06-21 13:14:34,393 | INFO     | --------------------------------------------------
[2024-06-21 06:14:56] 2024-06-21 13:14:34,393 | INFO     | 
[2024-06-21 06:14:56] 2024-06-21 13:14:34,393 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,424 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 06:14:56] 2024-06-21 13:14:34,425 | INFO     | job 6238901397 has completed (purged errors)
[2024-06-21 06:14:56] 2024-06-21 13:14:34,426 | INFO     | overall cleanup function is called
[2024-06-21 06:14:56] 2024-06-21 13:14:35,433 | INFO     | --- collectZombieJob: --- 10, [199535]
[2024-06-21 06:14:56] 2024-06-21 13:14:35,433 | INFO     | zombie collector waiting for pid 199535
[2024-06-21 06:14:56] 2024-06-21 13:14:35,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 06:14:56] 2024-06-21 13:14:36,438 | INFO     | collected zombie processes
[2024-06-21 06:14:56] 2024-06-21 13:14:36,438 | INFO     | will now attempt to kill all subprocesses of pid=199535
[2024-06-21 06:14:56] 2024-06-21 13:14:36,531 | INFO     | process IDs to be killed: [199535] (in reverse order)
[2024-06-21 06:14:56] 2024-06-21 13:14:36,585 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 06:14:56] 2024-06-21 13:14:36,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 06:14:56] 2024-06-21 13:14:36,589 | INFO     | did not find any defunct processes belonging to 199535
[2024-06-21 06:14:56] 2024-06-21 13:14:36,591 | INFO     | did not find any defunct processes belonging to 199535
[2024-06-21 06:14:56] 2024-06-21 13:14:36,591 | INFO     | ready for new job
[2024-06-21 06:14:56] 2024-06-21 13:14:36,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 06:14:56] 2024-06-21 13:14:36,592 | INFO     | *************************************
[2024-06-21 06:14:56] 2024-06-21 13:14:36,593 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 06:14:56] 2024-06-21 13:14:36,593 | INFO     | *************************************
[2024-06-21 06:14:56] 2024-06-21 13:14:36,593 | INFO     | 
[2024-06-21 06:14:56] 2024-06-21 13:14:36,594 | INFO     | architecture information:
[2024-06-21 06:14:56] 2024-06-21 13:14:36,594 | INFO     | executing command: cat /etc/os-release
[2024-06-21 06:14:56] 2024-06-21 13:14:36,616 | INFO     | cat /etc/os-release:
[2024-06-21 06:14:56] NAME="CentOS Linux"
[2024-06-21 06:14:56] VERSION="7 (Core)"
[2024-06-21 06:14:56] ID="centos"
[2024-06-21 06:14:56] ID_LIKE="rhel fedora"
[2024-06-21 06:14:56] VERSION_ID="7"
[2024-06-21 06:14:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 06:14:56] ANSI_COLOR="0;31"
[2024-06-21 06:14:56] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 06:14:56] HOME_URL="https://www.centos.org/"
[2024-06-21 06:14:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 06:14:56] 
[2024-06-21 06:14:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 06:14:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 06:14:56] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 06:14:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 06:14:56] 
[2024-06-21 06:14:56] 2024-06-21 13:14:36,617 | INFO     | *************************************
[2024-06-21 06:14:56] 2024-06-21 13:14:37,119 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 06:14:56] 2024-06-21 13:14:37,142 | INFO     | sufficient remaining disk space (2451521404928 B)
[2024-06-21 06:14:56] 2024-06-21 13:14:37,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 06:14:56] 2024-06-21 13:14:37,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 06:14:56] 2024-06-21 13:14:37,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 06:14:56] 2024-06-21 13:14:37,144 | INFO     | aborting loop
[2024-06-21 06:14:56] 2024-06-21 13:14:37,343 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 06:14:56] 2024-06-21 13:14:37,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 06:14:56] 2024-06-21 13:14:37,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 06:14:56] 2024-06-21 13:14:37,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 06:14:56] 2024-06-21 13:14:37,739 | INFO     | all job control threads have been joined
[2024-06-21 06:14:56] 2024-06-21 13:14:37,875 | INFO     | all payload control threads have been joined
[2024-06-21 06:14:56] 2024-06-21 13:14:37,998 | INFO     | all data control threads have been joined
[2024-06-21 06:14:56] 2024-06-21 13:14:38,146 | INFO     | [job] job monitor thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,148 | INFO     | [job] retrieve thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,155 | INFO     | [payload] validate_post thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,511 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,718 | INFO     | [payload] failed_post thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,747 | INFO     | [job] control thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,799 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,879 | INFO     | [payload] control thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:38,935 | INFO     | [data] copytool_in thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:39,004 | INFO     | [data] control thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:39,097 | INFO     | [job] validate thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:39,209 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:39,400 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 06:14:56] 2024-06-21 13:14:39,450 | INFO     | [data] copytool_out thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:40,405 | INFO     | [job] queue monitor thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:40,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 06:14:56] 2024-06-21 13:14:44,564 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:47,488 | INFO     | job.realtimelogging is not enabled
[2024-06-21 06:14:56] 2024-06-21 13:14:48,494 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 06:14:56] 2024-06-21 13:14:50,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399218558784)>', '<ExcThread(monitor, started 140398521480960)>']
[2024-06-21 06:14:56] 2024-06-21 13:14:51,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 06:14:56] 2024-06-21 13:14:51,388 | INFO     | [monitor] control thread has ended
[2024-06-21 06:14:56] 2024-06-21 13:14:55,613 | INFO     | all workflow threads have been joined
[2024-06-21 06:14:56] 2024-06-21 13:14:55,614 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 06:14:56] 2024-06-21 13:14:55,614 | INFO     | traces error code: 0
[2024-06-21 06:14:56] 2024-06-21 13:14:55,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 06:14:56] 2024-06-21 13:14:55,747 [wrapper] ==== pilot stdout END ====
[2024-06-21 06:14:56] 2024-06-21 13:14:55,751 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 06:14:56] 2024-06-21 13:14:55,756 [wrapper] pilotpid: 193105
[2024-06-21 06:14:56] 2024-06-21 13:14:55,761 [wrapper] Pilot exit status: 0
[2024-06-21 06:14:56] 2024-06-21 13:14:55,780 [wrapper] pandaids: 6238901397
[2024-06-21 06:14:56] 2024-06-21 13:14:55,823 [wrapper] cleanup supervisor_pilot 134292 193106
[2024-06-21 06:14:56] 2024-06-21 13:14:55,829 [wrapper] Test setup, not cleaning
[2024-06-21 06:14:56] 2024-06-21 13:14:55,834 [wrapper] ==== wrapper stdout END ====
[2024-06-21 06:14:56] 2024-06-21 13:14:55,839 [wrapper] ==== wrapper stderr END ====
[2024-06-21 06:14:56] 2024-06-21 13:14:55,847 [wrapper] apfmon messages muted
[2024-06-21 06:14:56]  *** Error codes and diagnostics ***
[2024-06-21 06:14:56]     "exeErrorCode": 0,
[2024-06-21 06:14:56]     "exeErrorDiag": "",
[2024-06-21 06:14:56]     "pilotErrorCode": 0,
[2024-06-21 06:14:56]     "pilotErrorDiag": "",
[2024-06-21 06:14:56]  *** Listing of results directory ***
[2024-06-21 06:14:56] total 845392
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc    469766 Jun 20 08:13 pilot3.tar.gz
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc      5654 Jun 20 08:19 queuedata.json
[2024-06-21 06:14:56] -rwx------ 1 boinc boinc     32308 Jun 20 08:19 runpilot2-wrapper.sh
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc       100 Jun 21 04:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 06:14:56] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 04:41 run_atlas
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc       105 Jun 21 04:41 job.xml
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc      6653 Jun 21 04:41 init_data.xml
[2024-06-21 06:14:56] -rw-r--r-- 2 boinc boinc 597548660 Jun 21 04:41 EVNT.40024021._000028.pool.root.1
[2024-06-21 06:14:56] drwxrwx--x 2 boinc boinc      4096 Jun 21 04:41 shared
[2024-06-21 06:14:56] -rw-r--r-- 2 boinc boinc    482488 Jun 21 04:41 input.tar.gz
[2024-06-21 06:14:56] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:41 start_atlas.sh
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc         0 Jun 21 04:41 boinc_lockfile
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc      2515 Jun 21 04:41 pandaJob.out
[2024-06-21 06:14:56] -rw------- 1 boinc boinc       424 Jun 21 04:41 setup.sh.local
[2024-06-21 06:14:56] -rw------- 1 boinc boinc   1023843 Jun 21 04:41 agis_schedconf.cvmfs.json
[2024-06-21 06:14:56] -rw------- 1 boinc boinc         0 Jun 21 04:41 agis_ddmendpoints.agis.ALL.json
[2024-06-21 06:14:56] -rw------- 1 boinc boinc   1321251 Jun 21 04:41 cric_ddmendpoints.json
[2024-06-21 06:14:56] drwx------ 4 boinc boinc      4096 Jun 21 04:41 pilot3
[2024-06-21 06:14:56] -rw------- 1 boinc boinc 262975978 Jun 21 06:13 HITS.40024023._000883.pool.root.1
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc       531 Jun 21 06:14 boinc_task_state.xml
[2024-06-21 06:14:56] -rw------- 1 boinc boinc        95 Jun 21 06:14 pilot_heartbeat.json
[2024-06-21 06:14:56] -rw------- 1 boinc boinc      1079 Jun 21 06:14 memory_monitor_summary.json
[2024-06-21 06:14:56] -rw------- 1 boinc boinc    365194 Jun 21 06:14 log.40024023._000883.job.log.tgz.1
[2024-06-21 06:14:56] -rw------- 1 boinc boinc      7789 Jun 21 06:14 heartbeat.json
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc      8192 Jun 21 06:14 boinc_mmap_file
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc        27 Jun 21 06:14 wrapper_checkpoint.txt
[2024-06-21 06:14:56] -rw------- 1 boinc boinc      4282 Jun 21 06:14 pilotlog.txt
[2024-06-21 06:14:56] -rw------- 1 boinc boinc    445341 Jun 21 06:14 log.40024023._000883.job.log.1
[2024-06-21 06:14:56] -rw------- 1 boinc boinc       357 Jun 21 06:14 output.list
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc       620 Jun 21 06:14 runtime_log
[2024-06-21 06:14:56] -rw------- 1 boinc boinc    829440 Jun 21 06:14 result.tar.gz
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc     11286 Jun 21 06:14 runtime_log.err
[2024-06-21 06:14:56] -rw------- 1 boinc boinc       657 Jun 21 06:14 1nMNDmtkYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm9UlKDmq2wZNm.diag
[2024-06-21 06:14:56] -rw-r--r-- 1 boinc boinc     21428 Jun 21 06:14 stderr.txt
[2024-06-21 06:14:56] HITS file was successfully produced:
[2024-06-21 06:14:56] -rw------- 1 boinc boinc 262975978 Jun 21 06:13 shared/HITS.pool.root.1
[2024-06-21 06:14:56]  *** Contents of shared directory: ***
[2024-06-21 06:14:56] total 841672
[2024-06-21 06:14:56] -rw-r--r-- 2 boinc boinc 597548660 Jun 21 04:41 ATLAS.root_0
[2024-06-21 06:14:56] -rw-r--r-- 2 boinc boinc    482488 Jun 21 04:41 input.tar.gz
[2024-06-21 06:14:56] -rw-r--r-- 2 boinc boinc     17537 Jun 21 04:41 start_atlas.sh
[2024-06-21 06:14:56] -rw------- 1 boinc boinc 262975978 Jun 21 06:13 HITS.pool.root.1
[2024-06-21 06:14:56] -rw------- 1 boinc boinc    829440 Jun 21 06:14 result.tar.gz
06:14:58 (188954): run_atlas exited; CPU time 38004.992954
06:14:58 (188954): called boinc_finish(0)

</stderr_txt>
]]>

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