Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
01:09:53 (109733): wrapper (7.7.26015): starting
01:09:53 (109733): wrapper: running run_atlas (--nthreads 12)
[2024-06-21 01:09:53] Arguments: --nthreads 12
[2024-06-21 01:09:53] Threads: 12
[2024-06-21 01:09:53] Checking for CVMFS
[2024-06-21 01:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-21 01:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-21 01:09:54] Running cvmfs_config stat atlas.cern.ch
[2024-06-21 01:09:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-21 01:09:54] 2.10.1.0 168680 233616 119184 134117 3 359 41060892 45568000 5591 130560 0 1496924237 99.763 905583848 17125 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-21 01:09:54] CVMFS is ok
[2024-06-21 01:09:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 01:09:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 01:09:54] Further information can be found at the LHC@home message board.
[2024-06-21 01:09:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 01:09:54] Checking for apptainer binary...
[2024-06-21 01:09:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-21 01:09:54] Running /usr/bin/apptainer --version
[2024-06-21 01:09:54] apptainer version 1.3.2-1.el7
[2024-06-21 01:09:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 01:09:55] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0058.triumf.lcg
[2024-06-21 01:09:55] apptainer works
[2024-06-21 01:09:55] Set ATHENA_PROC_NUMBER=12
[2024-06-21 01:09:55] Set ATHENA_CORE_NUMBER=12
[2024-06-21 01:09:55] Starting ATLAS job with PandaID=6238906169
[2024-06-21 01:09:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 02:46:14]  *** The last 200 lines of the pilot log: ***
[2024-06-21 02:46:14]  filesize=367504
[2024-06-21 02:46:14]  filetype=log
[2024-06-21 02:46:14]  guid=f3c19814-a37a-403f-a435-7c5ba7876a11
[2024-06-21 02:46:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-21 02:46:14]  is_tar=False
[2024-06-21 02:46:14]  lfn=log.40024049._000908.job.log.tgz.1
[2024-06-21 02:46:14]  mtime=0
[2024-06-21 02:46:14]  protocol_id=None
[2024-06-21 02:46:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-21 02:46:14]  replicas=None
[2024-06-21 02:46:14]  scope=mc23_13p6TeV
[2024-06-21 02:46:14]  status=None
[2024-06-21 02:46:14]  status_code=0
[2024-06-21 02:46:14]  storage_token=
[2024-06-21 02:46:14]  surl=/home/boinc/slots/0/PanDA_Pilot-6238906169/log.40024049._000908.job.log.tgz.1
[2024-06-21 02:46:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/a0/log.40024049._000908.job.log.tgz.1
[2024-06-21 02:46:14]  workdir=None
[2024-06-21 02:46:14] ]
[2024-06-21 02:46:14] 2024-06-21 09:45:47,459 | INFO     | transferring file log.40024049._000908.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6238906169/log.40024049._000908.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-21 02:46:14] 2024-06-21 09:45:47,459 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6238906169/log.40024049._000908.job.log.tgz.1 /home/boinc/slots/0/log.40024049._000908.job.log.t
[2024-06-21 02:46:14] 2024-06-21 09:45:47,482 | INFO     | adding to output.list: log.40024049._000908.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/a0/log.40024049._000908.job.log.tg
[2024-06-21 02:46:14] 2024-06-21 09:45:47,482 | INFO     | summary of transferred files:
[2024-06-21 02:46:14] 2024-06-21 09:45:47,482 | INFO     |  -- lfn=log.40024049._000908.job.log.tgz.1, status_code=0, status=transferred
[2024-06-21 02:46:14] 2024-06-21 09:45:47,482 | INFO     | stage-out finished correctly
[2024-06-21 02:46:14] 2024-06-21 09:45:47,536 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-21 02:46:14] 2024-06-21 09:45:48,031 | INFO     | monitor loop #427: job 0:6238906169 is in state 'finished'
[2024-06-21 02:46:14] 2024-06-21 09:45:48,032 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 02:46:14] 2024-06-21 09:45:49,332 | INFO     | job 6238906169 has state=finished
[2024-06-21 02:46:14] 2024-06-21 09:45:49,332 | INFO     | preparing for final server update for job 6238906169 in state='finished'
[2024-06-21 02:46:14] 2024-06-21 09:45:49,332 | INFO     | this job has now completed (state=finished)
[2024-06-21 02:46:14] 2024-06-21 09:45:49,333 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-21 02:46:14] 2024-06-21 09:45:49,333 | INFO     | job 6238906169 has finished - writing final server update
[2024-06-21 02:46:14] 2024-06-21 09:45:49,333 | INFO     | total number of processed events: 400 (read)
[2024-06-21 02:46:14] 2024-06-21 09:45:49,336 | INFO     | executing command: lscpu
[2024-06-21 02:46:14] 2024-06-21 09:45:49,381 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-21 02:46:14] 2024-06-21 09:45:49,382 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-21 02:46:14] 2024-06-21 09:45:49,430 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-21 02:46:14] 2024-06-21 09:45:50,535 | INFO     | monitor loop #428: job 0:6238906169 is in state 'finished'
[2024-06-21 02:46:14] 2024-06-21 09:45:50,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-21 02:46:14] 2024-06-21 09:45:52,280 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-21 02:46:14] 2024-06-21 09:45:52,280 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6238906169/memory_monitor_summary.json (trf name=prmon)
[2024-06-21 02:46:14] 2024-06-21 09:45:52,281 | INFO     | extracted standard info from prmon json
[2024-06-21 02:46:14] 2024-06-21 09:45:52,281 | INFO     | extracted standard memory fields from prmon json
[2024-06-21 02:46:14] 2024-06-21 09:45:52,281 | WARNING  | GPU info not found in prmon json
[2024-06-21 02:46:14] 2024-06-21 09:45:52,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 02:46:14] 2024-06-21 09:45:52,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | fitting pss+swap vs Time
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | model: linear, x: [1718957730.0, 1718957791.0, 1718957852.0, 1718957913.0, 1718957974.0, 1718958035.0, 1718958096.0, 1718958157.0, 1718958218.0, 1718958279.0, 1718
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | sum of square deviations: 204165792.06896532
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | sum of deviations: 33422879148.13794
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | mean x: 1718960353.1034484
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | mean y: 2596403.206896552
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | -- intersect: -281399119133.98804
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | intersect: -281399119133.98804
[2024-06-21 02:46:14] 2024-06-21 09:45:52,283 | INFO     | chi2: 2.7148253487531773
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | -- intersect: -281399119133.98804
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | current memory leak: 163.70 B/s (using 87 data points, chi2=2.71)
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | ..............................
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . Timing measurements:
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . get job = 0 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . initial setup = 2 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . payload setup = 4 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . stage-in = 0 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . payload execution = 5720 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . stage-out = 1 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | . log creation = 0 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,284 | INFO     | ..............................
[2024-06-21 02:46:14] 2024-06-21 09:45:52,337 | INFO     | 
[2024-06-21 02:46:14] 2024-06-21 09:45:52,337 | INFO     | job summary report
[2024-06-21 02:46:14] 2024-06-21 09:45:52,337 | INFO     | --------------------------------------------------
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | PanDA job id: 6238906169
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | task id: 40024049
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | errors: (none)
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | pilot state: finished 
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | transexitcode: 0
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | exeerrorcode: 0
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | exeerrordiag: 
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | exitcode: 0
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | exitmsg: OK
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | cpuconsumptiontime: 38540 s
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | nevents: 400
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | neventsw: 0
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | pid: 120613
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | pgrp: 120613
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | corecount: 12
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | event service: False
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | sizes: {0: 2385340, 1: 2386873, 4: 2387079, 12: 2387107, 5728: 2413669, 5729: 2422807, 5734: 2422921}
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | --------------------------------------------------
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | 
[2024-06-21 02:46:14] 2024-06-21 09:45:52,338 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,376 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | job 6238906169 has completed (purged errors)
[2024-06-21 02:46:14] 2024-06-21 09:45:52,377 | INFO     | overall cleanup function is called
[2024-06-21 02:46:14] 2024-06-21 09:45:53,380 | INFO     | --- collectZombieJob: --- 10, [120613]
[2024-06-21 02:46:14] 2024-06-21 09:45:53,381 | INFO     | zombie collector waiting for pid 120613
[2024-06-21 02:46:14] 2024-06-21 09:45:53,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 02:46:14] 2024-06-21 09:45:54,386 | INFO     | collected zombie processes
[2024-06-21 02:46:14] 2024-06-21 09:45:54,387 | INFO     | will now attempt to kill all subprocesses of pid=120613
[2024-06-21 02:46:14] 2024-06-21 09:45:54,515 | INFO     | process IDs to be killed: [120613] (in reverse order)
[2024-06-21 02:46:14] 2024-06-21 09:45:54,592 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 02:46:14] 2024-06-21 09:45:54,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 02:46:14] 2024-06-21 09:45:54,599 | INFO     | did not find any defunct processes belonging to 120613
[2024-06-21 02:46:14] 2024-06-21 09:45:54,604 | INFO     | did not find any defunct processes belonging to 120613
[2024-06-21 02:46:14] 2024-06-21 09:45:54,605 | INFO     | ready for new job
[2024-06-21 02:46:14] 2024-06-21 09:45:54,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 02:46:14] 2024-06-21 09:45:54,607 | INFO     | *************************************
[2024-06-21 02:46:14] 2024-06-21 09:45:54,607 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 02:46:14] 2024-06-21 09:45:54,607 | INFO     | *************************************
[2024-06-21 02:46:14] 2024-06-21 09:45:54,608 | INFO     | 
[2024-06-21 02:46:14] 2024-06-21 09:45:54,611 | INFO     | architecture information:
[2024-06-21 02:46:14] 2024-06-21 09:45:54,611 | INFO     | executing command: cat /etc/os-release
[2024-06-21 02:46:14] 2024-06-21 09:45:54,626 | INFO     | cat /etc/os-release:
[2024-06-21 02:46:14] NAME="CentOS Linux"
[2024-06-21 02:46:14] VERSION="7 (Core)"
[2024-06-21 02:46:14] ID="centos"
[2024-06-21 02:46:14] ID_LIKE="rhel fedora"
[2024-06-21 02:46:14] VERSION_ID="7"
[2024-06-21 02:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 02:46:14] ANSI_COLOR="0;31"
[2024-06-21 02:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 02:46:14] HOME_URL="https://www.centos.org/"
[2024-06-21 02:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 02:46:14] 
[2024-06-21 02:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 02:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 02:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 02:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 02:46:14] 
[2024-06-21 02:46:14] 2024-06-21 09:45:54,626 | INFO     | *************************************
[2024-06-21 02:46:14] 2024-06-21 09:45:55,129 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-21 02:46:14] 2024-06-21 09:45:55,151 | INFO     | sufficient remaining disk space (1884671705088 B)
[2024-06-21 02:46:14] 2024-06-21 09:45:55,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 02:46:14] 2024-06-21 09:45:55,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 02:46:14] 2024-06-21 09:45:55,168 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 02:46:14] 2024-06-21 09:45:55,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 02:46:14] 2024-06-21 09:45:55,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 02:46:14] 2024-06-21 09:45:55,182 | INFO     | all payload control threads have been joined
[2024-06-21 02:46:14] 2024-06-21 09:45:55,319 | INFO     | all job control threads have been joined
[2024-06-21 02:46:14] 2024-06-21 09:45:55,543 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-21 02:46:14] 2024-06-21 09:45:55,544 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-21 02:46:14] 2024-06-21 09:45:55,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:46:14] 2024-06-21 09:45:55,544 | INFO     | will abort loop
[2024-06-21 02:46:14] 2024-06-21 09:45:55,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 02:46:14] 2024-06-21 09:45:55,914 | INFO     | all data control threads have been joined
[2024-06-21 02:46:14] 2024-06-21 09:45:56,157 | INFO     | [job] retrieve thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:56,188 | INFO     | [payload] control thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:56,325 | INFO     | [job] control thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:56,545 | INFO     | [job] job monitor thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:56,589 | INFO     | [payload] failed_post thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:56,920 | INFO     | [data] control thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,013 | INFO     | [payload] validate_post thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,170 | INFO     | [job] validate thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,186 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,206 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,333 | INFO     | [data] copytool_in thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 02:46:14] 2024-06-21 09:45:57,554 | INFO     | [data] copytool_out thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:57,605 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:45:58,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 02:46:14] 2024-06-21 09:45:58,352 | INFO     | [job] queue monitor thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:46:02,099 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:46:05,491 | INFO     | job.realtimelogging is not enabled
[2024-06-21 02:46:14] 2024-06-21 09:46:06,496 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 02:46:14] 2024-06-21 09:46:07,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140556758792000)>', '<ExcThread(monitor, started 140556462176000)>']
[2024-06-21 02:46:14] 2024-06-21 09:46:08,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 02:46:14] 2024-06-21 09:46:08,227 | INFO     | [monitor] control thread has ended
[2024-06-21 02:46:14] 2024-06-21 09:46:12,601 | INFO     | all workflow threads have been joined
[2024-06-21 02:46:14] 2024-06-21 09:46:12,601 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 02:46:14] 2024-06-21 09:46:12,601 | INFO     | traces error code: 0
[2024-06-21 02:46:14] 2024-06-21 09:46:12,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 02:46:14] 2024-06-21 09:46:12,743 [wrapper] ==== pilot stdout END ====
[2024-06-21 02:46:14] 2024-06-21 09:46:12,746 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 02:46:14] 2024-06-21 09:46:12,748 [wrapper] pilotpid: 113942
[2024-06-21 02:46:14] 2024-06-21 09:46:12,750 [wrapper] Pilot exit status: 0
[2024-06-21 02:46:14] 2024-06-21 09:46:12,759 [wrapper] pandaids: 6238906169
[2024-06-21 02:46:14] 2024-06-21 09:46:12,801 [wrapper] cleanup supervisor_pilot 156600 113943
[2024-06-21 02:46:14] 2024-06-21 09:46:12,803 [wrapper] Test setup, not cleaning
[2024-06-21 02:46:14] 2024-06-21 09:46:12,805 [wrapper] ==== wrapper stdout END ====
[2024-06-21 02:46:14] 2024-06-21 09:46:12,807 [wrapper] ==== wrapper stderr END ====
[2024-06-21 02:46:14] 2024-06-21 09:46:12,811 [wrapper] apfmon messages muted
[2024-06-21 02:46:14]  *** Error codes and diagnostics ***
[2024-06-21 02:46:14]     "exeErrorCode": 0,
[2024-06-21 02:46:14]     "exeErrorDiag": "",
[2024-06-21 02:46:14]     "pilotErrorCode": 0,
[2024-06-21 02:46:14]     "pilotErrorDiag": "",
[2024-06-21 02:46:14]  *** Listing of results directory ***
[2024-06-21 02:46:14] total 869528
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc    469766 Jun 20 08:13 pilot3.tar.gz
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc      5654 Jun 20 08:23 queuedata.json
[2024-06-21 02:46:14] -rwx------ 1 boinc boinc     32308 Jun 20 08:24 runpilot2-wrapper.sh
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc       100 Jun 21 01:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 02:46:14] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 01:09 run_atlas
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc       105 Jun 21 01:09 job.xml
[2024-06-21 02:46:14] -rw-r--r-- 2 boinc boinc 612377583 Jun 21 01:09 EVNT.40024047._000008.pool.root.1
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc      6629 Jun 21 01:09 init_data.xml
[2024-06-21 02:46:14] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:09 start_atlas.sh
[2024-06-21 02:46:14] drwxrwx--x 2 boinc boinc      4096 Jun 21 01:09 shared
[2024-06-21 02:46:14] -rw-r--r-- 2 boinc boinc    482484 Jun 21 01:09 input.tar.gz
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc         0 Jun 21 01:09 boinc_lockfile
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc      2494 Jun 21 01:09 pandaJob.out
[2024-06-21 02:46:14] -rw------- 1 boinc boinc       424 Jun 21 01:09 setup.sh.local
[2024-06-21 02:46:14] -rw------- 1 boinc boinc   1023442 Jun 21 01:10 agis_schedconf.cvmfs.json
[2024-06-21 02:46:14] -rw------- 1 boinc boinc         0 Jun 21 01:10 agis_ddmendpoints.agis.ALL.json
[2024-06-21 02:46:14] -rw------- 1 boinc boinc   1321251 Jun 21 01:10 cric_ddmendpoints.json
[2024-06-21 02:46:14] drwx------ 4 boinc boinc      4096 Jun 21 01:10 pilot3
[2024-06-21 02:46:14] -rw------- 1 boinc boinc 272732688 Jun 21 02:45 HITS.40024049._000908.pool.root.1
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc       530 Jun 21 02:45 boinc_task_state.xml
[2024-06-21 02:46:14] -rw------- 1 boinc boinc        95 Jun 21 02:45 pilot_heartbeat.json
[2024-06-21 02:46:14] -rw------- 1 boinc boinc      1069 Jun 21 02:45 memory_monitor_summary.json
[2024-06-21 02:46:14] -rw------- 1 boinc boinc    367504 Jun 21 02:45 log.40024049._000908.job.log.tgz.1
[2024-06-21 02:46:14] -rw------- 1 boinc boinc      7784 Jun 21 02:45 heartbeat.json
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc      8192 Jun 21 02:45 boinc_mmap_file
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc        27 Jun 21 02:45 wrapper_checkpoint.txt
[2024-06-21 02:46:14] -rw------- 1 boinc boinc      4468 Jun 21 02:46 pilotlog.txt
[2024-06-21 02:46:14] -rw------- 1 boinc boinc    508587 Jun 21 02:46 log.40024049._000908.job.log.1
[2024-06-21 02:46:14] -rw------- 1 boinc boinc       357 Jun 21 02:46 output.list
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc       620 Jun 21 02:46 runtime_log
[2024-06-21 02:46:14] -rw------- 1 boinc boinc    890880 Jun 21 02:46 result.tar.gz
[2024-06-21 02:46:14] -rw------- 1 boinc boinc       654 Jun 21 02:46 XoXNDmwoYe5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmDQXKDmkpYGgm.diag
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc     11286 Jun 21 02:46 runtime_log.err
[2024-06-21 02:46:14] -rw-r--r-- 1 boinc boinc     21587 Jun 21 02:46 stderr.txt
[2024-06-21 02:46:14] HITS file was successfully produced:
[2024-06-21 02:46:14] -rw------- 1 boinc boinc 272732688 Jun 21 02:45 shared/HITS.pool.root.1
[2024-06-21 02:46:14]  *** Contents of shared directory: ***
[2024-06-21 02:46:14] total 865744
[2024-06-21 02:46:14] -rw-r--r-- 2 boinc boinc 612377583 Jun 21 01:09 ATLAS.root_0
[2024-06-21 02:46:14] -rw-r--r-- 2 boinc boinc     17537 Jun 21 01:09 start_atlas.sh
[2024-06-21 02:46:14] -rw-r--r-- 2 boinc boinc    482484 Jun 21 01:09 input.tar.gz
[2024-06-21 02:46:14] -rw------- 1 boinc boinc 272732688 Jun 21 02:45 HITS.pool.root.1
[2024-06-21 02:46:14] -rw------- 1 boinc boinc    890880 Jun 21 02:46 result.tar.gz
02:46:15 (109733): run_atlas exited; CPU time 38358.757264
02:46:15 (109733): called boinc_finish(0)

</stderr_txt>
]]>

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