Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:43:26 (1601192): wrapper (7.7.26015): starting
10:43:26 (1601192): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 10:43:26] Arguments: --nthreads 4
[2024-06-21 10:43:26] Threads: 4
[2024-06-21 10:43:26] Checking for CVMFS
[2024-06-21 10:43:26] No cvmfs_config command found, will try listing directly
[2024-06-21 10:43:26] CVMFS is ok
[2024-06-21 10:43:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 10:43:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 10:43:26] Further information can be found at the LHC@home message board.
[2024-06-21 10:43:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 10:43:26] Checking for apptainer binary...
[2024-06-21 10:43:26] which: no apptainer in ((null))
[2024-06-21 10:43:26] apptainer is not installed, using version from CVMFS
[2024-06-21 10:43:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 10:43:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-21 10:43:27] apptainer works
[2024-06-21 10:43:27] Set ATHENA_PROC_NUMBER=4
[2024-06-21 10:43:27] Set ATHENA_CORE_NUMBER=4
[2024-06-21 10:43:27] Starting ATLAS job with PandaID=6238900710
[2024-06-21 10:43:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 14:53:01]  *** The last 200 lines of the pilot log: ***
[2024-06-21 14:53:01] 2024-06-21 12:52:46,002 | INFO     | model: linear, x: [1718959491.0, 1718959552.0, 1718959613.0, 1718959674.0, 1718959735.0, 1718959796.0, 1718959857.0, 1718959918.0, 1718959979.0, 1718960040.0, 1718
[2024-06-21 14:53:01] 2024-06-21 12:52:46,002 | INFO     | sum of square deviations: 4233158440.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,003 | INFO     | sum of deviations: 103736598474.99998
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | mean x: 1718966750.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | mean y: 2301031.8995815897
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | -- intersect: -42122218062.78984
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | intersect: -42122218062.78984
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | chi2: 3.778079659538393
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | current chi2=3.778079659538393 (change=-0.031057119738203166 %)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,004 | INFO     | right removable region: 238
[2024-06-21 14:53:01] 2024-06-21 12:52:46,005 | INFO     | model: linear, x: [1718959796.0, 1718959857.0, 1718959918.0, 1718959979.0, 1718960040.0, 1718960101.0, 1718960162.0, 1718960223.0, 1718960284.0, 1718960345.0, 1718
[2024-06-21 14:53:01] 2024-06-21 12:52:46,005 | INFO     | sum of square deviations: 4233158440.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,006 | INFO     | sum of deviations: 51533806438.99999
[2024-06-21 14:53:01] 2024-06-21 12:52:46,006 | INFO     | mean x: 1718967055.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,006 | INFO     | mean y: 2333441.0041841003
[2024-06-21 14:53:01] 2024-06-21 12:52:46,006 | INFO     | -- intersect: -20924101688.456234
[2024-06-21 14:53:01] 2024-06-21 12:52:46,007 | INFO     | intersect: -20924101688.456234
[2024-06-21 14:53:01] 2024-06-21 12:52:46,007 | INFO     | chi2: 1.4387734059123596
[2024-06-21 14:53:01] 2024-06-21 12:52:46,007 | INFO     | current chi2=1.4387734059123596 (change=61.906037532632666 %)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,007 | INFO     | model: linear, x: [1718960101.0, 1718960162.0, 1718960223.0, 1718960284.0, 1718960345.0, 1718960406.0, 1718960467.0, 1718960528.0, 1718960589.0, 1718960650.0, 1718
[2024-06-21 14:53:01] 2024-06-21 12:52:46,007 | INFO     | sum of square deviations: 3972995422.5
[2024-06-21 14:53:01] 2024-06-21 12:52:46,009 | INFO     | sum of deviations: 7307781212.000001
[2024-06-21 14:53:01] 2024-06-21 12:52:46,009 | INFO     | mean x: 1718967207.5
[2024-06-21 14:53:01] 2024-06-21 12:52:46,009 | INFO     | mean y: 2359366.675213675
[2024-06-21 14:53:01] 2024-06-21 12:52:46,009 | INFO     | -- intersect: -3159445500.219925
[2024-06-21 14:53:01] 2024-06-21 12:52:46,009 | INFO     | intersect: -3159445500.219925
[2024-06-21 14:53:01] 2024-06-21 12:52:46,010 | INFO     | chi2: 0.06916589017436574
[2024-06-21 14:53:01] 2024-06-21 12:52:46,010 | INFO     | current chi2=0.06916589017436574 (change=95.19271833284228 %)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,010 | INFO     | model: linear, x: [1718960406.0, 1718960467.0, 1718960528.0, 1718960589.0, 1718960650.0, 1718960711.0, 1718960772.0, 1718960833.0, 1718960894.0, 1718960955.0, 1718
[2024-06-21 14:53:01] 2024-06-21 12:52:46,010 | INFO     | sum of square deviations: 3723716330.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,012 | INFO     | sum of deviations: 1983231023.9999998
[2024-06-21 14:53:01] 2024-06-21 12:52:46,012 | INFO     | mean x: 1718967360.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,012 | INFO     | mean y: 2362572.19650655
[2024-06-21 14:53:01] 2024-06-21 12:52:46,012 | INFO     | -- intersect: -913150075.7809985
[2024-06-21 14:53:01] 2024-06-21 12:52:46,012 | INFO     | intersect: -913150075.7809985
[2024-06-21 14:53:01] 2024-06-21 12:52:46,013 | INFO     | chi2: 0.009221391788315509
[2024-06-21 14:53:01] 2024-06-21 12:52:46,013 | INFO     | current chi2=0.009221391788315509 (change=86.66771762053727 %)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,013 | INFO     | model: linear, x: [1718960711.0, 1718960772.0, 1718960833.0, 1718960894.0, 1718960955.0, 1718961016.0, 1718961077.0, 1718961138.0, 1718961199.0, 1718961260.0, 1718
[2024-06-21 14:53:01] 2024-06-21 12:52:46,013 | INFO     | sum of square deviations: 3485088600.0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,015 | INFO     | sum of deviations: 3283846641.5
[2024-06-21 14:53:01] 2024-06-21 12:52:46,015 | INFO     | mean x: 1718967512.5
[2024-06-21 14:53:01] 2024-06-21 12:52:46,015 | INFO     | mean y: 2361739.78125
[2024-06-21 14:53:01] 2024-06-21 12:52:46,015 | INFO     | -- intersect: -1617346204.7372148
[2024-06-21 14:53:01] 2024-06-21 12:52:46,015 | INFO     | intersect: -1617346204.7372148
[2024-06-21 14:53:01] 2024-06-21 12:52:46,015 | INFO     | chi2: 0.007579365287967975
[2024-06-21 14:53:01] 2024-06-21 12:52:46,016 | INFO     | current chi2=0.007579365287967975 (change=17.806710071988885 %)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,016 | INFO     | left removable region: 40
[2024-06-21 14:53:01] 2024-06-21 12:52:46,016 | INFO     | model: linear, x: [1718961931.0, 1718961992.0, 1718962053.0, 1718962114.0, 1718962175.0, 1718962236.0, 1718962297.0, 1718962358.0, 1718962419.0, 1718962480.0, 1718
[2024-06-21 14:53:01] 2024-06-21 12:52:46,016 | INFO     | sum of square deviations: 2406926989.5
[2024-06-21 14:53:01] 2024-06-21 12:52:46,017 | INFO     | sum of deviations: 4038382450.999999
[2024-06-21 14:53:01] 2024-06-21 12:52:46,017 | INFO     | mean x: 1718967939.5
[2024-06-21 14:53:01] 2024-06-21 12:52:46,018 | INFO     | mean y: 2360408.292929293
[2024-06-21 14:53:01] 2024-06-21 12:52:46,018 | INFO     | -- intersect: -2881752816.159502
[2024-06-21 14:53:01] 2024-06-21 12:52:46,018 | INFO     | intersect: -2881752816.159502
[2024-06-21 14:53:01] 2024-06-21 12:52:46,018 | INFO     | chi2: 0.0004167425632555417
[2024-06-21 14:53:01] 2024-06-21 12:52:46,018 | INFO     | -- intersect: -2881752816.159502
[2024-06-21 14:53:01] 2024-06-21 12:52:46,018 | INFO     | current memory leak: 1.68 B/s (using 198 data points, chi2=0.00)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | ..............................
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . Timing measurements:
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . get job = 0 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . initial setup = 1 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . payload setup = 16 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . stage-in = 0 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . payload execution = 14865 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . stage-out = 1 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | . log creation = 0 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,019 | INFO     | ..............................
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | 
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | job summary report
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | --------------------------------------------------
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | PanDA job id: 6238900710
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | task id: 40024023
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | errors: (none)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | pilot state: finished 
[2024-06-21 14:53:01] 2024-06-21 12:52:46,123 | INFO     | transexitcode: 0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | exeerrorcode: 0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | exeerrordiag: 
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | exitcode: 0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | exitmsg: OK
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | cpuconsumptiontime: 56247 s
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | nevents: 400
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | neventsw: 0
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | pid: 1614366
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | pgrp: 1614366
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | corecount: 4
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | event service: False
[2024-06-21 14:53:01] 2024-06-21 12:52:46,124 | INFO     | sizes: {0: 2385980, 1: 2386915, 12: 2386915, 14: 2387149, 22: 2387177, 14885: 2418042, 14887: 2427082, 14900: 2427196}
[2024-06-21 14:53:01] 2024-06-21 12:52:46,125 | INFO     | --------------------------------------------------
[2024-06-21 14:53:01] 2024-06-21 12:52:46,125 | INFO     | 
[2024-06-21 14:53:01] 2024-06-21 12:52:46,125 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/1
[2024-06-21 14:53:01] 2024-06-21 12:52:46,232 | WARNING  | process 1614366 is no longer using CPU - aborting
[2024-06-21 14:53:01] 2024-06-21 12:52:46,233 | INFO     | aborting job monitoring since job object (job id=6238900710) has expired
[2024-06-21 14:53:01] 2024-06-21 12:52:46,242 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 14:53:01] 2024-06-21 12:52:46,244 | INFO     | job 6238900710 has completed (purged errors)
[2024-06-21 14:53:01] 2024-06-21 12:52:46,245 | INFO     | overall cleanup function is called
[2024-06-21 14:53:01] 2024-06-21 12:52:47,252 | INFO     | --- collectZombieJob: --- 10, [1614366]
[2024-06-21 14:53:01] 2024-06-21 12:52:47,252 | INFO     | zombie collector waiting for pid 1614366
[2024-06-21 14:53:01] 2024-06-21 12:52:47,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 14:53:01] 2024-06-21 12:52:48,257 | INFO     | collected zombie processes
[2024-06-21 14:53:01] 2024-06-21 12:52:48,258 | INFO     | will now attempt to kill all subprocesses of pid=1614366
[2024-06-21 14:53:01] 2024-06-21 12:52:48,538 | INFO     | process IDs to be killed: [1614366] (in reverse order)
[2024-06-21 14:53:01] 2024-06-21 12:52:48,750 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 14:53:01] 2024-06-21 12:52:48,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 14:53:01] 2024-06-21 12:52:48,771 | INFO     | did not find any defunct processes belonging to 1614366
[2024-06-21 14:53:01] 2024-06-21 12:52:48,786 | INFO     | did not find any defunct processes belonging to 1614366
[2024-06-21 14:53:01] 2024-06-21 12:52:48,786 | INFO     | ready for new job
[2024-06-21 14:53:01] 2024-06-21 12:52:48,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 14:53:01] 2024-06-21 12:52:48,788 | INFO     | *************************************
[2024-06-21 14:53:01] 2024-06-21 12:52:48,788 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 14:53:01] 2024-06-21 12:52:48,788 | INFO     | *************************************
[2024-06-21 14:53:01] 2024-06-21 12:52:48,788 | INFO     | 
[2024-06-21 14:53:01] 2024-06-21 12:52:48,795 | INFO     | architecture information:
[2024-06-21 14:53:01] 2024-06-21 12:52:48,796 | INFO     | executing command: cat /etc/os-release
[2024-06-21 14:53:01] 2024-06-21 12:52:48,815 | INFO     | cat /etc/os-release:
[2024-06-21 14:53:01] NAME="CentOS Linux"
[2024-06-21 14:53:01] VERSION="7 (Core)"
[2024-06-21 14:53:01] ID="centos"
[2024-06-21 14:53:01] ID_LIKE="rhel fedora"
[2024-06-21 14:53:01] VERSION_ID="7"
[2024-06-21 14:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 14:53:01] ANSI_COLOR="0;31"
[2024-06-21 14:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 14:53:01] HOME_URL="https://www.centos.org/"
[2024-06-21 14:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 14:53:01] 
[2024-06-21 14:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 14:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 14:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 14:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 14:53:01] 
[2024-06-21 14:53:01] 2024-06-21 12:52:48,815 | INFO     | *************************************
[2024-06-21 14:53:01] 2024-06-21 12:52:49,153 | INFO     | 14938s have passed since pilot start
[2024-06-21 14:53:01] 2024-06-21 12:52:49,318 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/1
[2024-06-21 14:53:01] 2024-06-21 12:52:49,344 | INFO     | sufficient remaining disk space (3264678461440 B)
[2024-06-21 14:53:01] 2024-06-21 12:52:49,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 14:53:01] 2024-06-21 12:52:49,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 14:53:01] 2024-06-21 12:52:49,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 14:53:01] 2024-06-21 12:52:49,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 14:53:01] 2024-06-21 12:52:49,569 | INFO     | all payload control threads have been joined
[2024-06-21 14:53:01] 2024-06-21 12:52:49,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 14:53:01] 2024-06-21 12:52:49,741 | INFO     | aborting loop
[2024-06-21 14:53:01] 2024-06-21 12:52:49,885 | INFO     | all data control threads have been joined
[2024-06-21 14:53:01] 2024-06-21 12:52:50,159 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 14:53:01] 2024-06-21 12:52:50,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 14:53:01] 2024-06-21 12:52:50,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 14:53:01] 2024-06-21 12:52:50,349 | INFO     | [job] retrieve thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:50,574 | INFO     | [payload] control thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:50,623 | INFO     | all job control threads have been joined
[2024-06-21 14:53:01] 2024-06-21 12:52:50,746 | INFO     | [job] job monitor thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:50,774 | INFO     | [job] validate thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:50,856 | INFO     | [payload] failed_post thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:50,890 | INFO     | [data] control thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:50,922 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,049 | INFO     | [payload] validate_post thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 14:53:01] 2024-06-21 12:52:51,181 | INFO     | [data] copytool_in thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,244 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,351 | INFO     | [data] copytool_out thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,611 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,629 | INFO     | [job] control thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:51,803 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:52,142 | INFO     | [job] queue monitor thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:53,351 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 14:53:01] 2024-06-21 12:52:55,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47713787757632)>', '<ExcThread(monitor, started 47713976436480)>']
[2024-06-21 14:53:01] 2024-06-21 12:52:55,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 14:53:01] 2024-06-21 12:52:55,184 | INFO     | [monitor] control thread has ended
[2024-06-21 14:53:01] 2024-06-21 12:53:00,204 | INFO     | all workflow threads have been joined
[2024-06-21 14:53:01] 2024-06-21 12:53:00,204 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 14:53:01] 2024-06-21 12:53:00,204 | INFO     | traces error code: 0
[2024-06-21 14:53:01] 2024-06-21 12:53:00,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 14:53:01] 2024-06-21 12:53:00,323 [wrapper] ==== pilot stdout END ====
[2024-06-21 14:53:01] 2024-06-21 12:53:00,325 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 14:53:01] 2024-06-21 12:53:00,327 [wrapper] pilotpid: 1606125
[2024-06-21 14:53:01] 2024-06-21 12:53:00,329 [wrapper] Pilot exit status: 0
[2024-06-21 14:53:01] 2024-06-21 12:53:00,342 [wrapper] pandaids: 6238900710
[2024-06-21 14:53:01] 2024-06-21 12:53:00,467 [wrapper] cleanup supervisor_pilot 2704848 1606126
[2024-06-21 14:53:01] 2024-06-21 12:53:00,469 [wrapper] Test setup, not cleaning
[2024-06-21 14:53:01] 2024-06-21 12:53:00,471 [wrapper] ==== wrapper stdout END ====
[2024-06-21 14:53:01] 2024-06-21 12:53:00,473 [wrapper] ==== wrapper stderr END ====
[2024-06-21 14:53:01] 2024-06-21 12:53:00,478 [wrapper] apfmon messages muted
[2024-06-21 14:53:01]  *** Error codes and diagnostics ***
[2024-06-21 14:53:01]     "exeErrorCode": 0,
[2024-06-21 14:53:01]     "exeErrorDiag": "",
[2024-06-21 14:53:01]     "pilotErrorCode": 0,
[2024-06-21 14:53:01]     "pilotErrorDiag": "",
[2024-06-21 14:53:01]  *** Listing of results directory ***
[2024-06-21 14:53:01] total 838816
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 14:53:01] -rwx------ 1 boinc boinc     32308 Jun 20 17:18 runpilot2-wrapper.sh
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:19 queuedata.json
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc       100 Jun 21 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 14:53:01] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 10:43 run_atlas
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc       105 Jun 21 10:43 job.xml
[2024-06-21 14:53:01] -rw-r--r-- 2 boinc boinc 597410721 Jun 21 10:43 EVNT.40024021._000018.pool.root.1
[2024-06-21 14:53:01] -rw-r--r-- 2 boinc boinc     17537 Jun 21 10:43 start_atlas.sh
[2024-06-21 14:53:01] drwxrwx--x 2 boinc boinc      4096 Jun 21 10:43 shared
[2024-06-21 14:53:01] -rw-r--r-- 2 boinc boinc    482484 Jun 21 10:43 input.tar.gz
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc      6644 Jun 21 10:43 init_data.xml
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc         0 Jun 21 10:43 boinc_lockfile
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc      2513 Jun 21 10:43 pandaJob.out
[2024-06-21 14:53:01] -rw------- 1 boinc boinc       424 Jun 21 10:43 setup.sh.local
[2024-06-21 14:53:01] -rw------- 1 boinc boinc   1023459 Jun 21 10:43 agis_schedconf.cvmfs.json
[2024-06-21 14:53:01] -rw------- 1 boinc boinc   1321251 Jun 21 10:43 cric_ddmendpoints.json
[2024-06-21 14:53:01] drwx------ 4 boinc boinc      4096 Jun 21 10:43 pilot3
[2024-06-21 14:53:01] -rw------- 1 boinc boinc 254329171 Jun 21 14:51 HITS.40024023._000751.pool.root.1
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc       531 Jun 21 14:51 boinc_task_state.xml
[2024-06-21 14:53:01] -rw------- 1 boinc boinc      1040 Jun 21 14:52 memory_monitor_summary.json
[2024-06-21 14:53:01] -rw------- 1 boinc boinc         0 Jun 21 14:52 agis_ddmendpoints.agis.ALL.json
[2024-06-21 14:53:01] -rw------- 1 boinc boinc    331646 Jun 21 14:52 log.40024023._000751.job.log.tgz.1
[2024-06-21 14:53:01] -rw------- 1 boinc boinc      7715 Jun 21 14:52 heartbeat.json
[2024-06-21 14:53:01] -rw------- 1 boinc boinc        95 Jun 21 14:52 pilot_heartbeat.json
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc      8192 Jun 21 14:52 boinc_mmap_file
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc        28 Jun 21 14:52 wrapper_checkpoint.txt
[2024-06-21 14:53:01] -rw------- 1 boinc boinc      4297 Jun 21 14:53 pilotlog.txt
[2024-06-21 14:53:01] -rw------- 1 boinc boinc   1503523 Jun 21 14:53 log.40024023._000751.job.log.1
[2024-06-21 14:53:01] -rw------- 1 boinc boinc       357 Jun 21 14:53 output.list
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc       620 Jun 21 14:53 runtime_log
[2024-06-21 14:53:01] -rw------- 1 boinc boinc   1853440 Jun 21 14:53 result.tar.gz
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc     11429 Jun 21 14:53 runtime_log.err
[2024-06-21 14:53:01] -rw------- 1 boinc boinc       658 Jun 21 14:53 NurLDmvjYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmjSlKDmOWvK9n.diag
[2024-06-21 14:53:01] -rw-r--r-- 1 boinc boinc     21379 Jun 21 14:53 stderr.txt
[2024-06-21 14:53:01] HITS file was successfully produced:
[2024-06-21 14:53:01] -rw------- 1 boinc boinc 254329171 Jun 21 14:51 shared/HITS.pool.root.1
[2024-06-21 14:53:01]  *** Contents of shared directory: ***
[2024-06-21 14:53:01] total 834096
[2024-06-21 14:53:01] -rw-r--r-- 2 boinc boinc 597410721 Jun 21 10:43 ATLAS.root_0
[2024-06-21 14:53:01] -rw-r--r-- 2 boinc boinc     17537 Jun 21 10:43 start_atlas.sh
[2024-06-21 14:53:01] -rw-r--r-- 2 boinc boinc    482484 Jun 21 10:43 input.tar.gz
[2024-06-21 14:53:01] -rw------- 1 boinc boinc 254329171 Jun 21 14:51 HITS.pool.root.1
[2024-06-21 14:53:01] -rw------- 1 boinc boinc   1853440 Jun 21 14:53 result.tar.gz
14:53:02 (1601192): run_atlas exited; CPU time 55926.487043
14:53:02 (1601192): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN