Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:01:46 (2782073): wrapper (7.7.26015): starting
14:01:46 (2782073): wrapper: running run_atlas (--nthreads 4)
[2024-06-21 14:01:46] Arguments: --nthreads 4
[2024-06-21 14:01:46] Threads: 4
[2024-06-21 14:01:46] Checking for CVMFS
[2024-06-21 14:01:46] No cvmfs_config command found, will try listing directly
[2024-06-21 14:01:46] CVMFS is ok
[2024-06-21 14:01:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-21 14:01:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-21 14:01:46] Further information can be found at the LHC@home message board.
[2024-06-21 14:01:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-21 14:01:46] Checking for apptainer binary...
[2024-06-21 14:01:46] which: no apptainer in ((null))
[2024-06-21 14:01:46] apptainer is not installed, using version from CVMFS
[2024-06-21 14:01:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-21 14:01:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-06-21 14:01:47] apptainer works
[2024-06-21 14:01:47] Set ATHENA_PROC_NUMBER=4
[2024-06-21 14:01:47] Set ATHENA_CORE_NUMBER=4
[2024-06-21 14:01:47] Starting ATLAS job with PandaID=6238889630
[2024-06-21 14:01:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-21 18:00:07]  *** The last 200 lines of the pilot log: ***
[2024-06-21 18:00:07] 2024-06-21 15:59:46,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-21 18:00:07] 2024-06-21 15:59:46,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-21 18:00:07] 2024-06-21 15:59:46,883 | INFO     | fitting pss+swap vs Time
[2024-06-21 18:00:07] 2024-06-21 15:59:46,883 | INFO     | model: linear, x: [1718971347.0, 1718971408.0, 1718971469.0, 1718971530.0, 1718971591.0, 1718971652.0, 1718971713.0, 1718971774.0, 1718971835.0, 1718971896.0, 1718
[2024-06-21 18:00:07] 2024-06-21 15:59:46,884 | INFO     | sum of square deviations: 3972995422.5
[2024-06-21 18:00:07] 2024-06-21 15:59:46,885 | INFO     | sum of deviations: 100412409148.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,885 | INFO     | mean x: 1718978453.5
[2024-06-21 18:00:07] 2024-06-21 15:59:46,885 | INFO     | mean y: 2286605.05982906
[2024-06-21 18:00:07] 2024-06-21 15:59:46,886 | INFO     | -- intersect: -43442708778.5054
[2024-06-21 18:00:07] 2024-06-21 15:59:46,886 | INFO     | intersect: -43442708778.5054
[2024-06-21 18:00:07] 2024-06-21 15:59:46,886 | INFO     | chi2: 5.1151824504934655
[2024-06-21 18:00:07] 2024-06-21 15:59:46,886 | INFO     | model: linear, x: [1718971347.0, 1718971408.0, 1718971469.0, 1718971530.0, 1718971591.0, 1718971652.0, 1718971713.0, 1718971774.0, 1718971835.0, 1718971896.0, 1718
[2024-06-21 18:00:07] 2024-06-21 15:59:46,886 | INFO     | sum of square deviations: 3723716330.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,888 | INFO     | sum of deviations: 112971149903.99998
[2024-06-21 18:00:07] 2024-06-21 15:59:46,888 | INFO     | mean x: 1718978301.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,888 | INFO     | mean y: 2294127.7991266376
[2024-06-21 18:00:07] 2024-06-21 15:59:46,888 | INFO     | -- intersect: -52148551456.07869
[2024-06-21 18:00:07] 2024-06-21 15:59:46,888 | INFO     | intersect: -52148551456.07869
[2024-06-21 18:00:07] 2024-06-21 15:59:46,889 | INFO     | chi2: 4.313363598529296
[2024-06-21 18:00:07] 2024-06-21 15:59:46,889 | INFO     | current chi2=4.313363598529296 (change=15.675273750730382 %)
[2024-06-21 18:00:07] 2024-06-21 15:59:46,889 | INFO     | right removable region: 228
[2024-06-21 18:00:07] 2024-06-21 15:59:46,889 | INFO     | model: linear, x: [1718971652.0, 1718971713.0, 1718971774.0, 1718971835.0, 1718971896.0, 1718971957.0, 1718972018.0, 1718972079.0, 1718972140.0, 1718972201.0, 1718
[2024-06-21 18:00:07] 2024-06-21 15:59:46,889 | INFO     | sum of square deviations: 3723716330.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,891 | INFO     | sum of deviations: 44628819146.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,891 | INFO     | mean x: 1718978606.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,891 | INFO     | mean y: 2320655.0524017466
[2024-06-21 18:00:07] 2024-06-21 15:59:46,891 | INFO     | -- intersect: -20599674374.7401
[2024-06-21 18:00:07] 2024-06-21 15:59:46,891 | INFO     | intersect: -20599674374.7401
[2024-06-21 18:00:07] 2024-06-21 15:59:46,891 | INFO     | chi2: 2.5180229852003255
[2024-06-21 18:00:07] 2024-06-21 15:59:46,892 | INFO     | current chi2=2.5180229852003255 (change=50.77354503831217 %)
[2024-06-21 18:00:07] 2024-06-21 15:59:46,892 | INFO     | model: linear, x: [1718971957.0, 1718972018.0, 1718972079.0, 1718972140.0, 1718972201.0, 1718972262.0, 1718972323.0, 1718972384.0, 1718972445.0, 1718972506.0, 1718
[2024-06-21 18:00:07] 2024-06-21 15:59:46,892 | INFO     | sum of square deviations: 3485088600.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,893 | INFO     | sum of deviations: -1007357599.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | mean x: 1718978758.5
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | mean y: 2349822.2053571427
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | -- intersect: 499217051.0312071
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | intersect: 499217051.0312071
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | chi2: 0.9228637117699704
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | current chi2=0.9228637117699704 (change=63.34967086503579 %)
[2024-06-21 18:00:07] 2024-06-21 15:59:46,894 | INFO     | model: linear, x: [1718972262.0, 1718972323.0, 1718972384.0, 1718972445.0, 1718972506.0, 1718972567.0, 1718972628.0, 1718972689.0, 1718972750.0, 1718972811.0, 1718
[2024-06-21 18:00:07] 2024-06-21 15:59:46,895 | INFO     | sum of square deviations: 3256879670.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,896 | INFO     | sum of deviations: -7929573061.000002
[2024-06-21 18:00:07] 2024-06-21 15:59:46,896 | INFO     | mean x: 1718978911.0
[2024-06-21 18:00:07] 2024-06-21 15:59:46,896 | INFO     | mean y: 2354393.621004566
[2024-06-21 18:00:07] 2024-06-21 15:59:46,896 | INFO     | -- intersect: 4187577750.396946
[2024-06-21 18:00:07] 2024-06-21 15:59:46,897 | INFO     | intersect: 4187577750.396946
[2024-06-21 18:00:07] 2024-06-21 15:59:46,897 | INFO     | chi2: 0.8427570805308193
[2024-06-21 18:00:07] 2024-06-21 15:59:46,897 | INFO     | current chi2=0.8427570805308193 (change=8.680223332816249 %)
[2024-06-21 18:00:07] 2024-06-21 15:59:46,897 | INFO     | left removable region: 30
[2024-06-21 18:00:07] 2024-06-21 15:59:46,897 | INFO     | model: linear, x: [1718973177.0, 1718973238.0, 1718973299.0, 1718973360.0, 1718973421.0, 1718973482.0, 1718973543.0, 1718973604.0, 1718973665.0, 1718973726.0, 1718
[2024-06-21 18:00:07] 2024-06-21 15:59:46,897 | INFO     | sum of square deviations: 2406926989.5
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | sum of deviations: 4180656563.5000005
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | mean x: 1718979185.5
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | mean y: 2365381.4191919193
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | -- intersect: -2983376041.453519
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | intersect: -2983376041.453519
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | chi2: 0.0003976472435937454
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | -- intersect: -2983376041.453519
[2024-06-21 18:00:07] 2024-06-21 15:59:46,899 | INFO     | current memory leak: 1.74 B/s (using 198 data points, chi2=0.00)
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | ..............................
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . Timing measurements:
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . get job = 0 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . initial setup = 1 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . payload setup = 6 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . stage-in = 0 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . payload execution = 14236 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . stage-out = 0 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,900 | INFO     | . log creation = 0 s
[2024-06-21 18:00:07] 2024-06-21 15:59:46,901 | INFO     | ..............................
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | 
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | job summary report
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | --------------------------------------------------
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | PanDA job id: 6238889630
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | task id: 40024058
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | errors: (none)
[2024-06-21 18:00:07] 2024-06-21 15:59:47,282 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | pilot state: finished 
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | transexitcode: 0
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | exeerrorcode: 0
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | exeerrordiag: 
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | exitcode: 0
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | exitmsg: OK
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | cpuconsumptiontime: 53930 s
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | nevents: 400
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | neventsw: 0
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | pid: 2794224
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | pgrp: 2794224
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | corecount: 4
[2024-06-21 18:00:07] 2024-06-21 15:59:47,283 | INFO     | event service: False
[2024-06-21 18:00:07] 2024-06-21 15:59:47,284 | INFO     | sizes: {0: 2386931, 1: 2386959, 6: 2387165, 11: 2387193, 14247: 2417709, 14248: 2426875, 14252: 2426989}
[2024-06-21 18:00:07] 2024-06-21 15:59:47,284 | INFO     | --------------------------------------------------
[2024-06-21 18:00:07] 2024-06-21 15:59:47,284 | INFO     | 
[2024-06-21 18:00:07] 2024-06-21 15:59:47,284 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-06-21 18:00:07] 2024-06-21 15:59:47,306 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,306 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | job 6238889630 has completed (purged errors)
[2024-06-21 18:00:07] 2024-06-21 15:59:47,308 | INFO     | overall cleanup function is called
[2024-06-21 18:00:07] 2024-06-21 15:59:48,316 | INFO     | --- collectZombieJob: --- 10, [2794224]
[2024-06-21 18:00:07] 2024-06-21 15:59:48,316 | INFO     | zombie collector waiting for pid 2794224
[2024-06-21 18:00:07] 2024-06-21 15:59:48,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-21 18:00:07] 2024-06-21 15:59:49,321 | INFO     | collected zombie processes
[2024-06-21 18:00:07] 2024-06-21 15:59:49,321 | INFO     | will now attempt to kill all subprocesses of pid=2794224
[2024-06-21 18:00:07] 2024-06-21 15:59:49,517 | INFO     | process IDs to be killed: [2794224] (in reverse order)
[2024-06-21 18:00:07] 2024-06-21 15:59:49,697 | WARNING  | found no corresponding commands to process id(s)
[2024-06-21 18:00:07] 2024-06-21 15:59:49,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-21 18:00:07] 2024-06-21 15:59:49,716 | INFO     | did not find any defunct processes belonging to 2794224
[2024-06-21 18:00:07] 2024-06-21 15:59:49,729 | INFO     | did not find any defunct processes belonging to 2794224
[2024-06-21 18:00:07] 2024-06-21 15:59:49,730 | INFO     | ready for new job
[2024-06-21 18:00:07] 2024-06-21 15:59:49,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-21 18:00:07] 2024-06-21 15:59:49,732 | INFO     | *************************************
[2024-06-21 18:00:07] 2024-06-21 15:59:49,732 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-21 18:00:07] 2024-06-21 15:59:49,732 | INFO     | *************************************
[2024-06-21 18:00:07] 2024-06-21 15:59:49,732 | INFO     | 
[2024-06-21 18:00:07] 2024-06-21 15:59:49,738 | INFO     | architecture information:
[2024-06-21 18:00:07] 2024-06-21 15:59:49,739 | INFO     | executing command: cat /etc/os-release
[2024-06-21 18:00:07] 2024-06-21 15:59:49,753 | INFO     | cat /etc/os-release:
[2024-06-21 18:00:07] NAME="CentOS Linux"
[2024-06-21 18:00:07] VERSION="7 (Core)"
[2024-06-21 18:00:07] ID="centos"
[2024-06-21 18:00:07] ID_LIKE="rhel fedora"
[2024-06-21 18:00:07] VERSION_ID="7"
[2024-06-21 18:00:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-21 18:00:07] ANSI_COLOR="0;31"
[2024-06-21 18:00:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-21 18:00:07] HOME_URL="https://www.centos.org/"
[2024-06-21 18:00:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-21 18:00:07] 
[2024-06-21 18:00:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-21 18:00:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-21 18:00:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-21 18:00:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-21 18:00:07] 
[2024-06-21 18:00:07] 2024-06-21 15:59:49,753 | INFO     | *************************************
[2024-06-21 18:00:07] 2024-06-21 15:59:50,256 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-06-21 18:00:07] 2024-06-21 15:59:50,281 | INFO     | sufficient remaining disk space (3164864512000 B)
[2024-06-21 18:00:07] 2024-06-21 15:59:50,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-21 18:00:07] 2024-06-21 15:59:50,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-21 18:00:07] 2024-06-21 15:59:50,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-21 18:00:07] 2024-06-21 15:59:50,282 | INFO     | aborting loop
[2024-06-21 18:00:07] 2024-06-21 15:59:50,381 | INFO     | all payload control threads have been joined
[2024-06-21 18:00:07] 2024-06-21 15:59:50,481 | INFO     | all data control threads have been joined
[2024-06-21 18:00:07] 2024-06-21 15:59:50,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-21 18:00:07] 2024-06-21 15:59:50,870 | INFO     | found 0 job(s) in 20 queues
[2024-06-21 18:00:07] 2024-06-21 15:59:50,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-21 18:00:07] 2024-06-21 15:59:50,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-21 18:00:07] 2024-06-21 15:59:51,287 | INFO     | [job] retrieve thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,287 | INFO     | [job] job monitor thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,292 | INFO     | [payload] execute_payloads thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,294 | INFO     | [job] validate thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,386 | INFO     | [payload] control thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,462 | INFO     | [payload] validate_pre thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,487 | INFO     | [data] control thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,507 | INFO     | all job control threads have been joined
[2024-06-21 18:00:07] 2024-06-21 15:59:51,562 | INFO     | [job] create_data_payload thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,983 | INFO     | [payload] validate_post thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:51,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-21 18:00:07] 2024-06-21 15:59:52,163 | INFO     | [data] copytool_in thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:52,512 | INFO     | [job] control thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:52,532 | INFO     | [payload] failed_post thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:52,614 | INFO     | [data] copytool_out thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:52,999 | INFO     | [job] queue monitor thread has finished
[2024-06-21 18:00:07] 2024-06-21 15:59:53,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-21 18:00:07] 2024-06-21 15:59:57,207 | INFO     | [data] queue_monitor thread has finished
[2024-06-21 18:00:07] 2024-06-21 16:00:00,781 | INFO     | job.realtimelogging is not enabled
[2024-06-21 18:00:07] 2024-06-21 16:00:01,786 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-21 18:00:07] 2024-06-21 16:00:01,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47206548575296)>', '<ExcThread(monitor, started 47206933477120)>']
[2024-06-21 18:00:07] 2024-06-21 16:00:01,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-21 18:00:07] 2024-06-21 16:00:01,926 | INFO     | [monitor] control thread has ended
[2024-06-21 18:00:07] 2024-06-21 16:00:06,918 | INFO     | all workflow threads have been joined
[2024-06-21 18:00:07] 2024-06-21 16:00:06,918 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-21 18:00:07] 2024-06-21 16:00:06,918 | INFO     | traces error code: 0
[2024-06-21 18:00:07] 2024-06-21 16:00:06,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-21 18:00:07] 2024-06-21 16:00:07,032 [wrapper] ==== pilot stdout END ====
[2024-06-21 18:00:07] 2024-06-21 16:00:07,034 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-21 18:00:07] 2024-06-21 16:00:07,037 [wrapper] pilotpid: 2786721
[2024-06-21 18:00:07] 2024-06-21 16:00:07,039 [wrapper] Pilot exit status: 0
[2024-06-21 18:00:07] 2024-06-21 16:00:07,045 [wrapper] pandaids: 6238889630
[2024-06-21 18:00:07] 2024-06-21 16:00:07,133 [wrapper] cleanup supervisor_pilot 3746334 2786722
[2024-06-21 18:00:07] 2024-06-21 16:00:07,136 [wrapper] Test setup, not cleaning
[2024-06-21 18:00:07] 2024-06-21 16:00:07,137 [wrapper] ==== wrapper stdout END ====
[2024-06-21 18:00:07] 2024-06-21 16:00:07,139 [wrapper] ==== wrapper stderr END ====
[2024-06-21 18:00:07] 2024-06-21 16:00:07,143 [wrapper] apfmon messages muted
[2024-06-21 18:00:07]  *** Error codes and diagnostics ***
[2024-06-21 18:00:07]     "exeErrorCode": 0,
[2024-06-21 18:00:07]     "exeErrorDiag": "",
[2024-06-21 18:00:07]     "pilotErrorCode": 0,
[2024-06-21 18:00:07]     "pilotErrorDiag": "",
[2024-06-21 18:00:07]  *** Listing of results directory ***
[2024-06-21 18:00:07] total 870016
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc    469766 Jun 20 17:13 pilot3.tar.gz
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc      5654 Jun 20 17:17 queuedata.json
[2024-06-21 18:00:07] -rwx------ 1 boinc boinc     32308 Jun 20 17:17 runpilot2-wrapper.sh
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc       100 Jun 21 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-21 18:00:07] -rwxr-xr-x 1 boinc boinc      7986 Jun 21 14:01 run_atlas
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc       105 Jun 21 14:01 job.xml
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc      6642 Jun 21 14:01 init_data.xml
[2024-06-21 18:00:07] -rw-r--r-- 2 boinc boinc 613849035 Jun 21 14:01 EVNT.40024055._000043.pool.root.1
[2024-06-21 18:00:07] -rw-r--r-- 2 boinc boinc     17537 Jun 21 14:01 start_atlas.sh
[2024-06-21 18:00:07] drwxrwx--x 2 boinc boinc      4096 Jun 21 14:01 shared
[2024-06-21 18:00:07] -rw-r--r-- 2 boinc boinc    482497 Jun 21 14:01 input.tar.gz
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc         0 Jun 21 14:01 boinc_lockfile
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc      2553 Jun 21 14:01 pandaJob.out
[2024-06-21 18:00:07] -rw------- 1 boinc boinc       424 Jun 21 14:01 setup.sh.local
[2024-06-21 18:00:07] -rw------- 1 boinc boinc   1023843 Jun 21 14:01 agis_schedconf.cvmfs.json
[2024-06-21 18:00:07] -rw------- 1 boinc boinc   1321251 Jun 21 14:01 cric_ddmendpoints.json
[2024-06-21 18:00:07] drwx------ 4 boinc boinc      4096 Jun 21 14:01 pilot3
[2024-06-21 18:00:07] -rw------- 1 boinc boinc 269993800 Jun 21 17:59 HITS.40024058._000823.pool.root.1
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc       531 Jun 21 17:59 boinc_task_state.xml
[2024-06-21 18:00:07] -rw------- 1 boinc boinc      1041 Jun 21 17:59 memory_monitor_summary.json
[2024-06-21 18:00:07] -rw------- 1 boinc boinc         0 Jun 21 17:59 agis_ddmendpoints.agis.ALL.json
[2024-06-21 18:00:07] -rw------- 1 boinc boinc    351437 Jun 21 17:59 log.40024058._000823.job.log.tgz.1
[2024-06-21 18:00:07] -rw------- 1 boinc boinc      7714 Jun 21 17:59 heartbeat.json
[2024-06-21 18:00:07] -rw------- 1 boinc boinc        95 Jun 21 17:59 pilot_heartbeat.json
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc        28 Jun 21 18:00 wrapper_checkpoint.txt
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc      8192 Jun 21 18:00 boinc_mmap_file
[2024-06-21 18:00:07] -rw------- 1 boinc boinc      4294 Jun 21 18:00 pilotlog.txt
[2024-06-21 18:00:07] -rw------- 1 boinc boinc   1406991 Jun 21 18:00 log.40024058._000823.job.log.1
[2024-06-21 18:00:07] -rw------- 1 boinc boinc       357 Jun 21 18:00 output.list
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc       620 Jun 21 18:00 runtime_log
[2024-06-21 18:00:07] -rw------- 1 boinc boinc   1781760 Jun 21 18:00 result.tar.gz
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc     11410 Jun 21 18:00 runtime_log.err
[2024-06-21 18:00:07] -rw------- 1 boinc boinc       657 Jun 21 18:00 b2eLDm4iYe5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmfQlKDmMsIvQm.diag
[2024-06-21 18:00:07] -rw-r--r-- 1 boinc boinc     21257 Jun 21 18:00 stderr.txt
[2024-06-21 18:00:07] HITS file was successfully produced:
[2024-06-21 18:00:07] -rw------- 1 boinc boinc 269993800 Jun 21 17:59 shared/HITS.pool.root.1
[2024-06-21 18:00:07]  *** Contents of shared directory: ***
[2024-06-21 18:00:07] total 865372
[2024-06-21 18:00:07] -rw-r--r-- 2 boinc boinc 613849035 Jun 21 14:01 ATLAS.root_0
[2024-06-21 18:00:07] -rw-r--r-- 2 boinc boinc     17537 Jun 21 14:01 start_atlas.sh
[2024-06-21 18:00:07] -rw-r--r-- 2 boinc boinc    482497 Jun 21 14:01 input.tar.gz
[2024-06-21 18:00:07] -rw------- 1 boinc boinc 269993800 Jun 21 17:59 HITS.pool.root.1
[2024-06-21 18:00:07] -rw------- 1 boinc boinc   1781760 Jun 21 18:00 result.tar.gz
18:00:09 (2782073): run_atlas exited; CPU time 53606.672082
18:00:09 (2782073): called boinc_finish(0)

</stderr_txt>
]]>

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